Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035162
CDS Infomation

pacid=37443780 polypeptide=PGSC0003DMP400023906 locus=PGSC0003DMG400013516 ID=PGSC0003DMT400035162.v4.03 annot-version=v4.03
Sequence

ATGGGAAGATTAAGCTTTCGGAGCGTAACGTTTATGTTCATCGTTGCATTTTTCGTATGG
TCGTCGTTAAATGTTGAGGTTTGTAATGCAAGAAGAGGTAAGCATTGGAGACAACATGGT
ACAACATCCTCTGTTTCTTTGTACAAGAAGAAGGGAAAGTCTCATGGTAGTAATAACCAC
CACAAAAGTGGTGGCAAACCGAAGCCAAAATACGCGTCTCCACCACCAAGTACACCAATT
AGTCCGCCAAGTAAAGGCTACGACAATGTACCTTCGACTAACATCTTTGATGTGACAAAT
TTTGGTGCTGTTGGAGATGGCAAGACCGATGATACTAAGGCATTTCAAGCTGCATGGGCA
GCTGCTTGTAAAGTGGAAGATTCGACGATGATTGTTCCATCGAAATATGTATTCCTTGTA
GGACCAATTTCATTCTCAGGTCCATACTGTCAACACAACATTGTCTTTCAGCTTGATGGA
ACAATAATTGCTCCAACAGATGCAAAATCTTGGGGTTCAGGTATTATGCAATGGCTTGAA
TTTACCAAATTGGTAGGAATTACTGTCAAAGGAAGCGGAGTGATTGATGGAAGAGGTTCA
GTTTGGTGGCTAGATACACCGTATGATGATCCTCTAGACGATGAATTGAAACTGATCATC
CCCTTAAACAAGACATTATTGAGACATCCTCCGACTCCTTTAAATAGCTCACTCAGTGGG
AAAATGCCAAGCATTAAGCCAACAGCTCTTCGATTCTATGGGAGTTTCAATGTAACTGTA
ACAGGCATCACAATTCAAAATAGCCAACAATGTCATCTCAAATTTGACAATTGCATAGGG
GTATTAGTAAACAATATCACTGTCTCATCTCCTGGAGATAGTCCTAATACAGATGGAATC
CATTTACAGAACTCCAAAGACGCGCTAATTCGCAGTTCCAACATTGCTTGTGGAGATGAC
TGTGTGTCGATACAAACTGGCTGCACCAACGTGTATGTACACAACATAAATTGTGGACCA
GGACATGGAATCAGCATTGGATCACTAGGGAAAGACAATACAAAGGCTTGTGTTTCAAAT
ATTACTGTCAAAGATGTTATTATGCAGAACACGATGAACGGTGTCAGGATTAAGACATGG
CAGGGGGGGTCAGGGTCAGTACAAGGAGTGTTTTTCTCAAACATTCAAATGAACGAAGTT
CAGCTACCGATTGTAATTGATCAGTTCTATTGTGACAAGAGCAGATGCAAGAACCAGACA
GCTGCAGTGGCTTTATCAGATATCAACTACGCAGGAATTAAAGGAACATATACAGTAAAA
CCGGTGCATCTAGCATGTAGTGACAGTATGCCTTGTCAAGACGTGACCATGATGAATATC
CAACTAAAGCCAATACAGGAACGTTACCACATGTATGATCCATTCTGTTGGCAGACGTTC
GGGGAGTTATATACTCCTACTCAACCTCCAATTGAATGTTTACAAGTCGGAAAACCAACG
AGCAACAAGATTCAAGCAGATCATGATCAATGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400023906
PEP Infomation

pacid=37443780 transcript=PGSC0003DMT400035162 locus=PGSC0003DMG400013516 ID=PGSC0003DMT400035162.v4.03 annot-version=v4.03
Sequence

MGRLSFRSVTFMFIVAFFVWSSLNVEVCNARRGKHWRQHGTTSSVSLYKKKGKSHGSNNH
HKSGGKPKPKYASPPPSTPISPPSKGYDNVPSTNIFDVTNFGAVGDGKTDDTKAFQAAWA
AACKVEDSTMIVPSKYVFLVGPISFSGPYCQHNIVFQLDGTIIAPTDAKSWGSGIMQWLE
FTKLVGITVKGSGVIDGRGSVWWLDTPYDDPLDDELKLIIPLNKTLLRHPPTPLNSSLSG
KMPSIKPTALRFYGSFNVTVTGITIQNSQQCHLKFDNCIGVLVNNITVSSPGDSPNTDGI
HLQNSKDALIRSSNIACGDDCVSIQTGCTNVYVHNINCGPGHGISIGSLGKDNTKACVSN
ITVKDVIMQNTMNGVRIKTWQGGSGSVQGVFFSNIQMNEVQLPIVIDQFYCDKSRCKNQT
AAVALSDINYAGIKGTYTVKPVHLACSDSMPCQDVTMMNIQLKPIQERYHMYDPFCWQTF
GELYTPTQPPIECLQVGKPTSNKIQADHDQC*

Transcript Sequence

Transcript ID

PGSC0003DMT400035162
Transcript Infomation

pacid=37443780 locus=PGSC0003DMG400013516 ID=PGSC0003DMT400035162.v4.03 annot-version=v4.03
Sequence

ATGGGAAGATTAAGCTTTCGGAGCGTAACGTTTATGTTCATCGTTGCATTTTTCGTATGG
TCGTCGTTAAATGTTGAGGTTTGTAATGCAAGAAGAGGTAAGCATTGGAGACAACATGGT
ACAACATCCTCTGTTTCTTTGTACAAGAAGAAGGGAAAGTCTCATGGTAGTAATAACCAC
CACAAAAGTGGTGGCAAACCGAAGCCAAAATACGCGTCTCCACCACCAAGTACACCAATT
AGTCCGCCAAGTAAAGGCTACGACAATGTACCTTCGACTAACATCTTTGATGTGACAAAT
TTTGGTGCTGTTGGAGATGGCAAGACCGATGATACTAAGGCATTTCAAGCTGCATGGGCA
GCTGCTTGTAAAGTGGAAGATTCGACGATGATTGTTCCATCGAAATATGTATTCCTTGTA
GGACCAATTTCATTCTCAGGTCCATACTGTCAACACAACATTGTCTTTCAGCTTGATGGA
ACAATAATTGCTCCAACAGATGCAAAATCTTGGGGTTCAGGTATTATGCAATGGCTTGAA
TTTACCAAATTGGTAGGAATTACTGTCAAAGGAAGCGGAGTGATTGATGGAAGAGGTTCA
GTTTGGTGGCTAGATACACCGTATGATGATCCTCTAGACGATGAATTGAAACTGATCATC
CCCTTAAACAAGACATTATTGAGACATCCTCCGACTCCTTTAAATAGCTCACTCAGTGGG
AAAATGCCAAGCATTAAGCCAACAGCTCTTCGATTCTATGGGAGTTTCAATGTAACTGTA
ACAGGCATCACAATTCAAAATAGCCAACAATGTCATCTCAAATTTGACAATTGCATAGGG
GTATTAGTAAACAATATCACTGTCTCATCTCCTGGAGATAGTCCTAATACAGATGGAATC
CATTTACAGAACTCCAAAGACGCGCTAATTCGCAGTTCCAACATTGCTTGTGGAGATGAC
TGTGTGTCGATACAAACTGGCTGCACCAACGTGTATGTACACAACATAAATTGTGGACCA
GGACATGGAATCAGCATTGGATCACTAGGGAAAGACAATACAAAGGCTTGTGTTTCAAAT
ATTACTGTCAAAGATGTTATTATGCAGAACACGATGAACGGTGTCAGGATTAAGACATGG
CAGGGGGGGTCAGGGTCAGTACAAGGAGTGTTTTTCTCAAACATTCAAATGAACGAAGTT
CAGCTACCGATTGTAATTGATCAGTTCTATTGTGACAAGAGCAGATGCAAGAACCAGACA
GCTGCAGTGGCTTTATCAGATATCAACTACGCAGGAATTAAAGGAACATATACAGTAAAA
CCGGTGCATCTAGCATGTAGTGACAGTATGCCTTGTCAAGACGTGACCATGATGAATATC
CAACTAAAGCCAATACAGGAACGTTACCACATGTATGATCCATTCTGTTGGCAGACGTTC
GGGGAGTTATATACTCCTACTCAACCTCCAATTGAATGTTTACAAGTCGGAAAACCAACG
AGCAACAAGATTCAAGCAGATCATGATCAATGCTAG