Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035134
CDS Infomation

pacid=37445156 polypeptide=PGSC0003DMP400023886 locus=PGSC0003DMG400013506 ID=PGSC0003DMT400035134.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCTTCATATGAATATTTGTCTATAGGGAAAGATTATGACCTTTCTCATTTA
GAAAAGCTTGCCAATGAATGGGATTCCAGCCTCCCAAGAAATAAAGATCCAAAGAATCTA
ATTGAGATCATTTATATGTATCTTAAATTTTTAGATATGTTTCTCAGCTTGCAGAGCTTC
ACAACTGTATGTTGGTATGCTACACAGAAAGTTCAAGAAGTTTTTTCTTATGCTGAAACT
GAAGTCAAAAGAATCAACCATCCCGGCGATGTTGCATCCGTGTTCTTTAAGTTGGAAGAA
CACATTTGTGAGACTAAGTTGGAAATCAGAGATAAATACTCATTTCCCGAAGCATCACTA
CCACTTTCCTCCATCGTTGCTACTCCCGAATTTGCAAAGAAATTCATTGATACTGTTGTA
AGGAATCTCACTGATTTATCAGAGATTTGTCATCCTTATATTGACATAGTTCCTCACTCA
AGCAAACAGCCAATGGAAGAGGTTGTAAAGGAGTTAAAGTTATTGAGAAATTTTGTCTAC
TTTATTTCAGATAGAATATGCTCGGATGAGTCGGATCCTCAAAGCCAACATACTTTCTTG
ACTCATGTTTTAGTTGTGGCTGGTCATGCAGCAATGATTTCTTGGTTGAATTTGCCAAAC
CATTGGAAAGAAAAAAACTTGGCTTCAGCTAAAATGAATGCTTCATTTTCCGACTTTCAG
AAGAGGATTCAGCCTATTCAACCATGTATCCGCAAGATCTATGTTGATGTCCTGCAAGCT
CTAAAATCAGGATGCCATCCAAATATTGAAGCTGAGTATGTTTCTGATTATAAATATGGC
TTTGTGGAGACTCTCGTACACCGTTTGAAAGTGCTACCCGTTACTTTCAAGGATCAAATG
CCAATGCTCAACTTCTTGAGAGACAATCTCATCAATCTACCAAGAGAGGCCTTTAAAGAT
CTTGATACCGCAATTATTGATGCAGGGCTTCTAGTTTACTCGTTGTATGACCGCGTGGAG
GAGAAGGAAGACGTGGCTGTTGGGGAGTCAAATCAAGTGCCAGTTCTTGATTTCTCAGGA
GATATTCCGAGTATACAAGCACTGATCTACCTCATCAGTCGGAAGTCATTTCACTCCAAA
TTACCTAAGATTGATGGACTGGGATCTATTGATATCATTTTAGACCACCTGAAGGAGTAT
CTAAGCCTCTATTCAGACTCACTTTCTTCTATAAAGAGCCAACTTTGGACAATTCAGCAG
CAATTGGATCACTTTCAGAAGCATCACGATGGATCGTTCCAGTATTTTTCAATGCAGGTG
ATTTCTATAGCATATGAGGTGTATCATTTGGTTGTCGGTTGCATAAATAATGATATCCCT
GAGTGGTGCCTTGTTCTCTGGATTGGAGACATCATAGAGGAGATTACACTACTCATGAAG
AATCATGATGAAAAGAAAGTTGCTGACTTGGTATTGCATACTACCACTGATGTTGTCAGT
GCTCATACGTCACAACTTACTCGGATTACAAGTATCAGAGAAGAAATGGTGGGTTTTGAT
GAGGTGGTGCAAACACTCAAGGGGAAGCTAATCAAAGGATCATCAAAATTGGATCTTATC
TCAATTGTTGGAATGGCCGGATTGGGTAAGACAACTCTAGCTAACAAACTATTTCTTGAT
CAGTTAGTTGTTTCTCATTTTGATGTCCGTGCACAATGTTGTGTATCTCAAGTATATACA
CGTAAAGACTTGTTACTAACCATTCTTCGGGGTGTGAAGAAGGATACAGTTATCAGTGAT
AAACTACCAGAGAATGAATTGGCAGATAAGTTGCGTAAACTTCTATTTGGTCAGAGGTAT
CTTATCCTCATTGATGATGTCTGGGAAACTACTGCATGTGATGATCTAATGCCTTGCTTC
TATGAAGCCAATAATGGAAGTAGACTTATCCTGACAACTCGCCATGATCATGTTGCCTAC
CATGCTAAACTCGTTAGTGATCCTCATTTTCTTCGAAAGTTTACTCTTGAAGAAAGTTGG
ATACTATTGAAGAATAAGGTGTTCAACAAAAAAAGTTGCCCCGCTGTCTTAGAAGATGTT
GGCCAAAAGATAGCACAAAAGTGTGGAGGGCTACCTCTTTCAGTTGTCCTGGTAGCAGGT
ATTCTCGAAACGATGGAGAAGGAAAAACGTTGTTGGGAACAAGTTGCAATAAATTTAGGT
CCACACATCCAGGCTAAGTCAGAGGATATAATAAATCTTAGTTACCAAGATTTACCATTT
CATTTGAAACCTTGCTTTTTGTATTTTGGAGTATTTTCGGAAGACGAAGAGATAAAGGTA
TCAAAGATAACATGGTTGTGGACAGCAGAAGGTTTGGTAAAAACTCATAAAGAGAAGCTT
TCAGAAGATATAGCAGAAAATTACTTAAAGAACCTTATTGGAAGAAACCTTGTGATGGTT
TCCAAGAAAAGTTCCAATGGTAAGACCAAGACATGTCGCATTCATGACTTGTTGCTTGAG
TTTTGTAAAAAGAAAGCCAAGGTGGAGAACTTTCTACAATGCATAGAAGGGGACAATGAT
AATATGAATCTTTCTTCTACTTCCTATCAGAAGCATAGCATTCAACGACGCTTATGCCTT
CAATTTCAAGTTGATAATCTTGCAGAATGGAGTTCGATTTGTTCAGATGTACAATCTTTC
CACTTGATGAAGGGAAGGAAAATTGGATTATCTTCAATTGGTTATGCATCACACACTTTT
AACAGTTTCAAGTTCCTGTGGGTGCTAGATTTAGAATTCACGGTAATTGATTCTTTCCCA
GAAGAGTTAACCTACTTGAGATATGTTGCTGTTAAAGTTGCTGAAGATTCTTCATTGACA
TTCTCGGACAATCTTTGGAACCTTGAAACTTTAATAGTTAAAGGACTTGGAGGACGAGTA
ACTTTACCAGATGCCATCTGGAAGATGGTCAAGTTGCGCCATTTGCACGTATACAAACAC
GCTATTTTCAATATAAACAATGCTCTCCAAGAGATGGATGGATTGAGAACTCTTTCCTCT
ACATGGTTTCCTTGTGTGGAGGATGCAAACAGGATCTTTGCAAAGACACCAAATCTTCAA
AAACTGAGATGTGAAGTTTTGTCATGTGATGGCTTTTTCCCTACATTTAACAATCTTGAA
ATGCTCAAGTTTTCTTGGGGTCGTTTGGGGATATGGGCCACTGAGCTGAATTTGCCACCA
AGTCTCAAGAAATTAACACTATCCAATGGTCGCGTATCTAGACTTGATCAGGTCGCAATC
CTCCCCAGACTTGAGGTACTCAAACTGCTAAACGTTTCCATTAAATACGAAGAATGGAAA
GTGACCGATGAGGATTTCCCTCACCTGAAATTCTTGAAACTGCAAGATCTTTCTTTTTCT
GAATGGGATGTTTCGGATGATGCTTTTCCATACCTTGAGCACTTGGTGTTAAGAAGATGT
CAATATCTTAAGATGATCCCTTCTTGCTTCGGATACATGATGTCTCTAAAATCCATTGAG
GTAAAGTCATGCAAGGAGGAATCACTCGCCGAGTCAGCCTTGGAGATCAAGAATATGCAA
GTTGATGAGATAGGAAATTCTGATTTCCAGGTCTTCATCCACAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400023886
PEP Infomation

pacid=37445156 transcript=PGSC0003DMT400035134 locus=PGSC0003DMG400013506 ID=PGSC0003DMT400035134.v4.03 annot-version=v4.03
Sequence

MSSSSYEYLSIGKDYDLSHLEKLANEWDSSLPRNKDPKNLIEIIYMYLKFLDMFLSLQSF
TTVCWYATQKVQEVFSYAETEVKRINHPGDVASVFFKLEEHICETKLEIRDKYSFPEASL
PLSSIVATPEFAKKFIDTVVRNLTDLSEICHPYIDIVPHSSKQPMEEVVKELKLLRNFVY
FISDRICSDESDPQSQHTFLTHVLVVAGHAAMISWLNLPNHWKEKNLASAKMNASFSDFQ
KRIQPIQPCIRKIYVDVLQALKSGCHPNIEAEYVSDYKYGFVETLVHRLKVLPVTFKDQM
PMLNFLRDNLINLPREAFKDLDTAIIDAGLLVYSLYDRVEEKEDVAVGESNQVPVLDFSG
DIPSIQALIYLISRKSFHSKLPKIDGLGSIDIILDHLKEYLSLYSDSLSSIKSQLWTIQQ
QLDHFQKHHDGSFQYFSMQVISIAYEVYHLVVGCINNDIPEWCLVLWIGDIIEEITLLMK
NHDEKKVADLVLHTTTDVVSAHTSQLTRITSIREEMVGFDEVVQTLKGKLIKGSSKLDLI
SIVGMAGLGKTTLANKLFLDQLVVSHFDVRAQCCVSQVYTRKDLLLTILRGVKKDTVISD
KLPENELADKLRKLLFGQRYLILIDDVWETTACDDLMPCFYEANNGSRLILTTRHDHVAY
HAKLVSDPHFLRKFTLEESWILLKNKVFNKKSCPAVLEDVGQKIAQKCGGLPLSVVLVAG
ILETMEKEKRCWEQVAINLGPHIQAKSEDIINLSYQDLPFHLKPCFLYFGVFSEDEEIKV
SKITWLWTAEGLVKTHKEKLSEDIAENYLKNLIGRNLVMVSKKSSNGKTKTCRIHDLLLE
FCKKKAKVENFLQCIEGDNDNMNLSSTSYQKHSIQRRLCLQFQVDNLAEWSSICSDVQSF
HLMKGRKIGLSSIGYASHTFNSFKFLWVLDLEFTVIDSFPEELTYLRYVAVKVAEDSSLT
FSDNLWNLETLIVKGLGGRVTLPDAIWKMVKLRHLHVYKHAIFNINNALQEMDGLRTLSS
TWFPCVEDANRIFAKTPNLQKLRCEVLSCDGFFPTFNNLEMLKFSWGRLGIWATELNLPP
SLKKLTLSNGRVSRLDQVAILPRLEVLKLLNVSIKYEEWKVTDEDFPHLKFLKLQDLSFS
EWDVSDDAFPYLEHLVLRRCQYLKMIPSCFGYMMSLKSIEVKSCKEESLAESALEIKNMQ
VDEIGNSDFQVFIHK*

Transcript Sequence

Transcript ID

PGSC0003DMT400035134
Transcript Infomation

pacid=37445156 locus=PGSC0003DMG400013506 ID=PGSC0003DMT400035134.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCTTCATATGAATATTTGTCTATAGGGAAAGATTATGACCTTTCTCATTTA
GAAAAGCTTGCCAATGAATGGGATTCCAGCCTCCCAAGAAATAAAGATCCAAAGAATCTA
ATTGAGATCATTTATATGTATCTTAAATTTTTAGATATGTTTCTCAGCTTGCAGAGCTTC
ACAACTGTATGTTGGTATGCTACACAGAAAGTTCAAGAAGTTTTTTCTTATGCTGAAACT
GAAGTCAAAAGAATCAACCATCCCGGCGATGTTGCATCCGTGTTCTTTAAGTTGGAAGAA
CACATTTGTGAGACTAAGTTGGAAATCAGAGATAAATACTCATTTCCCGAAGCATCACTA
CCACTTTCCTCCATCGTTGCTACTCCCGAATTTGCAAAGAAATTCATTGATACTGTTGTA
AGGAATCTCACTGATTTATCAGAGATTTGTCATCCTTATATTGACATAGTTCCTCACTCA
AGCAAACAGCCAATGGAAGAGGTTGTAAAGGAGTTAAAGTTATTGAGAAATTTTGTCTAC
TTTATTTCAGATAGAATATGCTCGGATGAGTCGGATCCTCAAAGCCAACATACTTTCTTG
ACTCATGTTTTAGTTGTGGCTGGTCATGCAGCAATGATTTCTTGGTTGAATTTGCCAAAC
CATTGGAAAGAAAAAAACTTGGCTTCAGCTAAAATGAATGCTTCATTTTCCGACTTTCAG
AAGAGGATTCAGCCTATTCAACCATGTATCCGCAAGATCTATGTTGATGTCCTGCAAGCT
CTAAAATCAGGATGCCATCCAAATATTGAAGCTGAGTATGTTTCTGATTATAAATATGGC
TTTGTGGAGACTCTCGTACACCGTTTGAAAGTGCTACCCGTTACTTTCAAGGATCAAATG
CCAATGCTCAACTTCTTGAGAGACAATCTCATCAATCTACCAAGAGAGGCCTTTAAAGAT
CTTGATACCGCAATTATTGATGCAGGGCTTCTAGTTTACTCGTTGTATGACCGCGTGGAG
GAGAAGGAAGACGTGGCTGTTGGGGAGTCAAATCAAGTGCCAGTTCTTGATTTCTCAGGA
GATATTCCGAGTATACAAGCACTGATCTACCTCATCAGTCGGAAGTCATTTCACTCCAAA
TTACCTAAGATTGATGGACTGGGATCTATTGATATCATTTTAGACCACCTGAAGGAGTAT
CTAAGCCTCTATTCAGACTCACTTTCTTCTATAAAGAGCCAACTTTGGACAATTCAGCAG
CAATTGGATCACTTTCAGAAGCATCACGATGGATCGTTCCAGTATTTTTCAATGCAGGTG
ATTTCTATAGCATATGAGGTGTATCATTTGGTTGTCGGTTGCATAAATAATGATATCCCT
GAGTGGTGCCTTGTTCTCTGGATTGGAGACATCATAGAGGAGATTACACTACTCATGAAG
AATCATGATGAAAAGAAAGTTGCTGACTTGGTATTGCATACTACCACTGATGTTGTCAGT
GCTCATACGTCACAACTTACTCGGATTACAAGTATCAGAGAAGAAATGGTGGGTTTTGAT
GAGGTGGTGCAAACACTCAAGGGGAAGCTAATCAAAGGATCATCAAAATTGGATCTTATC
TCAATTGTTGGAATGGCCGGATTGGGTAAGACAACTCTAGCTAACAAACTATTTCTTGAT
CAGTTAGTTGTTTCTCATTTTGATGTCCGTGCACAATGTTGTGTATCTCAAGTATATACA
CGTAAAGACTTGTTACTAACCATTCTTCGGGGTGTGAAGAAGGATACAGTTATCAGTGAT
AAACTACCAGAGAATGAATTGGCAGATAAGTTGCGTAAACTTCTATTTGGTCAGAGGTAT
CTTATCCTCATTGATGATGTCTGGGAAACTACTGCATGTGATGATCTAATGCCTTGCTTC
TATGAAGCCAATAATGGAAGTAGACTTATCCTGACAACTCGCCATGATCATGTTGCCTAC
CATGCTAAACTCGTTAGTGATCCTCATTTTCTTCGAAAGTTTACTCTTGAAGAAAGTTGG
ATACTATTGAAGAATAAGGTGTTCAACAAAAAAAGTTGCCCCGCTGTCTTAGAAGATGTT
GGCCAAAAGATAGCACAAAAGTGTGGAGGGCTACCTCTTTCAGTTGTCCTGGTAGCAGGT
ATTCTCGAAACGATGGAGAAGGAAAAACGTTGTTGGGAACAAGTTGCAATAAATTTAGGT
CCACACATCCAGGCTAAGTCAGAGGATATAATAAATCTTAGTTACCAAGATTTACCATTT
CATTTGAAACCTTGCTTTTTGTATTTTGGAGTATTTTCGGAAGACGAAGAGATAAAGGTA
TCAAAGATAACATGGTTGTGGACAGCAGAAGGTTTGGTAAAAACTCATAAAGAGAAGCTT
TCAGAAGATATAGCAGAAAATTACTTAAAGAACCTTATTGGAAGAAACCTTGTGATGGTT
TCCAAGAAAAGTTCCAATGGTAAGACCAAGACATGTCGCATTCATGACTTGTTGCTTGAG
TTTTGTAAAAAGAAAGCCAAGGTGGAGAACTTTCTACAATGCATAGAAGGGGACAATGAT
AATATGAATCTTTCTTCTACTTCCTATCAGAAGCATAGCATTCAACGACGCTTATGCCTT
CAATTTCAAGTTGATAATCTTGCAGAATGGAGTTCGATTTGTTCAGATGTACAATCTTTC
CACTTGATGAAGGGAAGGAAAATTGGATTATCTTCAATTGGTTATGCATCACACACTTTT
AACAGTTTCAAGTTCCTGTGGGTGCTAGATTTAGAATTCACGGTAATTGATTCTTTCCCA
GAAGAGTTAACCTACTTGAGATATGTTGCTGTTAAAGTTGCTGAAGATTCTTCATTGACA
TTCTCGGACAATCTTTGGAACCTTGAAACTTTAATAGTTAAAGGACTTGGAGGACGAGTA
ACTTTACCAGATGCCATCTGGAAGATGGTCAAGTTGCGCCATTTGCACGTATACAAACAC
GCTATTTTCAATATAAACAATGCTCTCCAAGAGATGGATGGATTGAGAACTCTTTCCTCT
ACATGGTTTCCTTGTGTGGAGGATGCAAACAGGATCTTTGCAAAGACACCAAATCTTCAA
AAACTGAGATGTGAAGTTTTGTCATGTGATGGCTTTTTCCCTACATTTAACAATCTTGAA
ATGCTCAAGTTTTCTTGGGGTCGTTTGGGGATATGGGCCACTGAGCTGAATTTGCCACCA
AGTCTCAAGAAATTAACACTATCCAATGGTCGCGTATCTAGACTTGATCAGGTCGCAATC
CTCCCCAGACTTGAGGTACTCAAACTGCTAAACGTTTCCATTAAATACGAAGAATGGAAA
GTGACCGATGAGGATTTCCCTCACCTGAAATTCTTGAAACTGCAAGATCTTTCTTTTTCT
GAATGGGATGTTTCGGATGATGCTTTTCCATACCTTGAGCACTTGGTGTTAAGAAGATGT
CAATATCTTAAGATGATCCCTTCTTGCTTCGGATACATGATGTCTCTAAAATCCATTGAG
GTAAAGTCATGCAAGGAGGAATCACTCGCCGAGTCAGCCTTGGAGATCAAGAATATGCAA
GTTGATGAGATAGGAAATTCTGATTTCCAGGTCTTCATCCACAAGTAG