Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035094
CDS Infomation

pacid=37445082 polypeptide=PGSC0003DMP400023861 locus=PGSC0003DMG400013492 ID=PGSC0003DMT400035094.v4.03 annot-version=v4.03
Sequence

ATGGACTTGAAGAAACTTCCATTTTCTGATTCTTCTCCAAGAAGAAAGGTAGTTGTTTCT
GGCTTTGGTTTGGGTGTTGCTGCATCTTTCATTTTTGTTTGTATTCTATTGTTGAATTAT
TCATTCAAATCTCCATTTGTAACCCCTGTTTTTACTGGTTTTAGTTACAGTGATAATAAT
AATAGTAATAGTACCCTCATTTCTTGGCCTTTCTCTTTCTCTAATGCTAGTGTTAGTTTG
AGTTCCAAAGCTTCACACAATGTGGAAAATGGAAACTTTAGTGTTCAAGAAACCAAGAAA
ATTGATGAAAGTGGAATATTTTCCAATTTGGAGGAAAAGGGGGAAATTTTAGGAAATACC
CATGTCCTCAATTTCTCTGAAAAGGTAAAAAATCGAAGCTTTCTTGTTCAAGAATCAGGA
ATTGTCAAGAAAACCCATGGGTCAGAAATTGATGGGAATGGAACTGTTTTGGGTATCCAA
GATTCCACCAAGTATAATGTGACCTCAACTTATATTGAGGATGTTGTGGGATCAAGTGGT
GGTGATAGGAAAAAAGTTGCAGTGGGTGAGGGTAAAGGGGGTTTATCTGTGGAGAAGAAT
GGTGTGTTGTTTCAAAGTGATGGAGAATCATTGATTAGACGTGACAAGGATTTTTATGGG
GATTGTGATGTATATGATGGTGAATGGGTTAGAGATGACACGAAGCCATATTATCCTCCG
GGTTCTTGCCCTATTATCGATAGAGATTTTGATTGTCACCTTAATAAGAGGCCAGATGAT
GAGTATATCAAGTGGAGATGGCAGCCATATGCATGTGACATACCGAGCCTCAATGCAACT
GATTTTCTGGAGAGGTTGAGAGGGCAAAAGCTTGTTTTTGTGGGGGACTCATTGAATAGG
AACATGTGGGAGTCCCTTGTTTGCATTCTTCGCCACAGTATTCGAGACAAAAAGCGAGTT
TATGAGATATCAGGAAGGCATGAATTCAAAAAGAAGGGCTTCTATGCATTCAGATTTGAG
GATTATAACTGTTCTGTGGATTTTGTTAGTTCCCCGTTTCTTGTCAGACAATCAACTTTT
AAAGGGAAAAATGGTTCTTTCGAGACGCTAAGATTAGATTTGATGGACAAGACGACTTCA
ATGTATAGTGATGCTGATATTGTAATTTTCAACACTGGTCATTGGTGGACTCATGAGAAA
ACCTCCAGAGGGGAAGACTACTACCAGGAAGGTAATCATGTGCATGGAAGGCTCAAGGTT
TTAGAGGCATACAAGAGAGCGATTTCCACTTGGGCAAGGTGGGTGGATCAGAACTTTGGT
GGAAGCAGAACTCAAGTTATTTTTAGAGGATATTCGGTCACACACTTCAGGTACAATTCT
TTGTTACATGTTAATTTAGCTACAACTCTAATGGGGATATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400023861
PEP Infomation

pacid=37445082 transcript=PGSC0003DMT400035094 locus=PGSC0003DMG400013492 ID=PGSC0003DMT400035094.v4.03 annot-version=v4.03
Sequence

MDLKKLPFSDSSPRRKVVVSGFGLGVAASFIFVCILLLNYSFKSPFVTPVFTGFSYSDNN
NSNSTLISWPFSFSNASVSLSSKASHNVENGNFSVQETKKIDESGIFSNLEEKGEILGNT
HVLNFSEKVKNRSFLVQESGIVKKTHGSEIDGNGTVLGIQDSTKYNVTSTYIEDVVGSSG
GDRKKVAVGEGKGGLSVEKNGVLFQSDGESLIRRDKDFYGDCDVYDGEWVRDDTKPYYPP
GSCPIIDRDFDCHLNKRPDDEYIKWRWQPYACDIPSLNATDFLERLRGQKLVFVGDSLNR
NMWESLVCILRHSIRDKKRVYEISGRHEFKKKGFYAFRFEDYNCSVDFVSSPFLVRQSTF
KGKNGSFETLRLDLMDKTTSMYSDADIVIFNTGHWWTHEKTSRGEDYYQEGNHVHGRLKV
LEAYKRAISTWARWVDQNFGGSRTQVIFRGYSVTHFRYNSLLHVNLATTLMGIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400035094
Transcript Infomation

pacid=37445082 locus=PGSC0003DMG400013492 ID=PGSC0003DMT400035094.v4.03 annot-version=v4.03
Sequence

ATGGACTTGAAGAAACTTCCATTTTCTGATTCTTCTCCAAGAAGAAAGGTAGTTGTTTCT
GGCTTTGGTTTGGGTGTTGCTGCATCTTTCATTTTTGTTTGTATTCTATTGTTGAATTAT
TCATTCAAATCTCCATTTGTAACCCCTGTTTTTACTGGTTTTAGTTACAGTGATAATAAT
AATAGTAATAGTACCCTCATTTCTTGGCCTTTCTCTTTCTCTAATGCTAGTGTTAGTTTG
AGTTCCAAAGCTTCACACAATGTGGAAAATGGAAACTTTAGTGTTCAAGAAACCAAGAAA
ATTGATGAAAGTGGAATATTTTCCAATTTGGAGGAAAAGGGGGAAATTTTAGGAAATACC
CATGTCCTCAATTTCTCTGAAAAGGTAAAAAATCGAAGCTTTCTTGTTCAAGAATCAGGA
ATTGTCAAGAAAACCCATGGGTCAGAAATTGATGGGAATGGAACTGTTTTGGGTATCCAA
GATTCCACCAAGTATAATGTGACCTCAACTTATATTGAGGATGTTGTGGGATCAAGTGGT
GGTGATAGGAAAAAAGTTGCAGTGGGTGAGGGTAAAGGGGGTTTATCTGTGGAGAAGAAT
GGTGTGTTGTTTCAAAGTGATGGAGAATCATTGATTAGACGTGACAAGGATTTTTATGGG
GATTGTGATGTATATGATGGTGAATGGGTTAGAGATGACACGAAGCCATATTATCCTCCG
GGTTCTTGCCCTATTATCGATAGAGATTTTGATTGTCACCTTAATAAGAGGCCAGATGAT
GAGTATATCAAGTGGAGATGGCAGCCATATGCATGTGACATACCGAGCCTCAATGCAACT
GATTTTCTGGAGAGGTTGAGAGGGCAAAAGCTTGTTTTTGTGGGGGACTCATTGAATAGG
AACATGTGGGAGTCCCTTGTTTGCATTCTTCGCCACAGTATTCGAGACAAAAAGCGAGTT
TATGAGATATCAGGAAGGCATGAATTCAAAAAGAAGGGCTTCTATGCATTCAGATTTGAG
GATTATAACTGTTCTGTGGATTTTGTTAGTTCCCCGTTTCTTGTCAGACAATCAACTTTT
AAAGGGAAAAATGGTTCTTTCGAGACGCTAAGATTAGATTTGATGGACAAGACGACTTCA
ATGTATAGTGATGCTGATATTGTAATTTTCAACACTGGTCATTGGTGGACTCATGAGAAA
ACCTCCAGAGGGGAAGACTACTACCAGGAAGGTAATCATGTGCATGGAAGGCTCAAGGTT
TTAGAGGCATACAAGAGAGCGATTTCCACTTGGGCAAGGTGGGTGGATCAGAACTTTGGT
GGAAGCAGAACTCAAGTTATTTTTAGAGGATATTCGGTCACACACTTCAGGTACAATTCT
TTGTTACATGTTAATTTAGCTACAACTCTAATGGGGATATCATGA