Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035086
CDS Infomation

pacid=37445508 polypeptide=PGSC0003DMP400023854 locus=PGSC0003DMG400013489 ID=PGSC0003DMT400035086.v4.03 annot-version=v4.03
Sequence

ATGTTGTATCTGTTTTGGAATGTGGGGCTGCTACTGTTTTGTACATTGATGGAGAGTTCT
TCTGCTACACTTTCTCCTGCTGGTGTAAACTATGAAGTTGTAGCTTTGACGGAAATTAAG
AAGGCCTTACATGACCCCTATAATGTTCTGGACAATTGGGATGTGAATTCTGTAGACCCT
TGCAGTTGGAGAATGGTCACTTGCTCCTTGGATGGCTATGTGTCTGCTCTAGCACTACCT
AGTCAAAGTCTAGCTGGCACCTTATCGCCTGGAATTGGCAATCTTACTAACTTGCAATAT
GTATTGTTGCAAAACAATGCCATTTCTGGTCATATTCCTGATGTGATTGGGAAGTTACAA
AAGCTTCAGACACTTGATCTTTCCAACAATAAATTTGAAGGCGAAATACCCACTTCCTTC
GAAGACCTGAAGAATTTGAATTATTTGGATGTCTCTTATAATAATCTAAGTGGTACCCTT
CCTAAAATATCAGCGCGAGCTTTCAAAGTGCTCGGGAATCCTTTAATTTGTGGTCAAGGT
TCTGAGAATAATTGCTCAGCAGTCTATCCAGAACCACTGTCCTTCCCACCTGATAGTCTG
GCAGATCAATCTGGTGCTGCACGCAAGAGCCGTCGCGTGGTTGTTGCGTTTGTTGCAAGT
TTTGGTGCTGCTTTCTTGGTCATAGTAGCCCTGGCTTTGCTTCTTTGGTGGCGCTACAGA
AATAATCAGCAGATCTTCTTTGATGTCAATGATCATTGTTATCCAGAGGTATGCTTGGGT
CACCTGAAAAGGTACACCCTTAAGGAACTGCGGACTGCCACTGACCATTTCAGCTCAAAA
CGTATTTTGGGAAAGGGAGGATTTGGGGTTGTGTATAAGGCCAGCTTAAACAATGGTACT
GTTGTGGCCGTCAAACGATTGAACGACTACAATGCTGTTGGTGGTGAAAATCAATTTCAG
ACAGAAGTAGAATTGATTAGTTTGGCTGTCCATCGGAATCTTCTCCATCTTCTGGGGTTT
TGTTCAACTGAAAGTGAACGGCTTCTTGTTTACCCCTATATGCCAAATGGAAGTGTAGCA
TCACGATTAAAAGATAGCATAAATGGTAAACCAGTTTTAGACTGGTCAAGGCGGAAAAAG
ATAGCACAAGGTACAGCGAGAGGGCTAGTTTACTTGCATGAGCAGTGTGATCCCAAAATT
ATCCATCGTGATGTCAAAGCAGCAAACATTCTGTTGGATGAAGAATTTGAGGCAGTAGTT
GGTGATTTTGGGTTGGCAAAGCTCTTGGATCACCACGATTCCCATGTGACTACTGCTGTT
AGGGGCACCATTGGCCACATTGCTCCAGAATATTTGTCTACTGGCCAATCGTCTGAAAAA
ACTGACGTTTTTGGGTTTGGAATCTTGCTACTTGAGCTGATTACAGGCCAGAAAGCTATG
GACTTTGGTCGAGGGGCCAACCAGAAAGGTGTTGTTATGCTTGATTGGGTGAGAAATCTG
CATCAAGAGGAGAAATTGAACCTTATGGTAGATAGCAATTTGAAAAATAACTTTGACCAG
ATTGAGCTAGAAGAGATGGTTAAAGTTGCCCTTCTATGCACCCATTTCAACCCTTCTCAT
CGCCCAAAAATGTCCGAAGCATTAAGGATGTTAGAAGGCGATGGATTGGCTGAAAAATGG
GAGGCATCACAAAAGCTCGAGACTCCAAGAAACCGAGCTTTTGAACATACACCACAAAGA
TATTCCAACTTCGTCGAAGACTCTTCACTAGTTGAACCAATGGAACTTTCTGGACCTAGA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400023854
PEP Infomation

pacid=37445508 transcript=PGSC0003DMT400035086 locus=PGSC0003DMG400013489 ID=PGSC0003DMT400035086.v4.03 annot-version=v4.03
Sequence

MLYLFWNVGLLLFCTLMESSSATLSPAGVNYEVVALTEIKKALHDPYNVLDNWDVNSVDP
CSWRMVTCSLDGYVSALALPSQSLAGTLSPGIGNLTNLQYVLLQNNAISGHIPDVIGKLQ
KLQTLDLSNNKFEGEIPTSFEDLKNLNYLDVSYNNLSGTLPKISARAFKVLGNPLICGQG
SENNCSAVYPEPLSFPPDSLADQSGAARKSRRVVVAFVASFGAAFLVIVALALLLWWRYR
NNQQIFFDVNDHCYPEVCLGHLKRYTLKELRTATDHFSSKRILGKGGFGVVYKASLNNGT
VVAVKRLNDYNAVGGENQFQTEVELISLAVHRNLLHLLGFCSTESERLLVYPYMPNGSVA
SRLKDSINGKPVLDWSRRKKIAQGTARGLVYLHEQCDPKIIHRDVKAANILLDEEFEAVV
GDFGLAKLLDHHDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKAM
DFGRGANQKGVVMLDWVRNLHQEEKLNLMVDSNLKNNFDQIELEEMVKVALLCTHFNPSH
RPKMSEALRMLEGDGLAEKWEASQKLETPRNRAFEHTPQRYSNFVEDSSLVEPMELSGPR
*

Transcript Sequence

Transcript ID

PGSC0003DMT400035086
Transcript Infomation

pacid=37445508 locus=PGSC0003DMG400013489 ID=PGSC0003DMT400035086.v4.03 annot-version=v4.03
Sequence

ATGTTGTATCTGTTTTGGAATGTGGGGCTGCTACTGTTTTGTACATTGATGGAGAGTTCT
TCTGCTACACTTTCTCCTGCTGGTGTAAACTATGAAGTTGTAGCTTTGACGGAAATTAAG
AAGGCCTTACATGACCCCTATAATGTTCTGGACAATTGGGATGTGAATTCTGTAGACCCT
TGCAGTTGGAGAATGGTCACTTGCTCCTTGGATGGCTATGTGTCTGCTCTAGCACTACCT
AGTCAAAGTCTAGCTGGCACCTTATCGCCTGGAATTGGCAATCTTACTAACTTGCAATAT
GTATTGTTGCAAAACAATGCCATTTCTGGTCATATTCCTGATGTGATTGGGAAGTTACAA
AAGCTTCAGACACTTGATCTTTCCAACAATAAATTTGAAGGCGAAATACCCACTTCCTTC
GAAGACCTGAAGAATTTGAATTATTTGGATGTCTCTTATAATAATCTAAGTGGTACCCTT
CCTAAAATATCAGCGCGAGCTTTCAAAGTGCTCGGGAATCCTTTAATTTGTGGTCAAGGT
TCTGAGAATAATTGCTCAGCAGTCTATCCAGAACCACTGTCCTTCCCACCTGATAGTCTG
GCAGATCAATCTGGTGCTGCACGCAAGAGCCGTCGCGTGGTTGTTGCGTTTGTTGCAAGT
TTTGGTGCTGCTTTCTTGGTCATAGTAGCCCTGGCTTTGCTTCTTTGGTGGCGCTACAGA
AATAATCAGCAGATCTTCTTTGATGTCAATGATCATTGTTATCCAGAGGTATGCTTGGGT
CACCTGAAAAGGTACACCCTTAAGGAACTGCGGACTGCCACTGACCATTTCAGCTCAAAA
CGTATTTTGGGAAAGGGAGGATTTGGGGTTGTGTATAAGGCCAGCTTAAACAATGGTACT
GTTGTGGCCGTCAAACGATTGAACGACTACAATGCTGTTGGTGGTGAAAATCAATTTCAG
ACAGAAGTAGAATTGATTAGTTTGGCTGTCCATCGGAATCTTCTCCATCTTCTGGGGTTT
TGTTCAACTGAAAGTGAACGGCTTCTTGTTTACCCCTATATGCCAAATGGAAGTGTAGCA
TCACGATTAAAAGATAGCATAAATGGTAAACCAGTTTTAGACTGGTCAAGGCGGAAAAAG
ATAGCACAAGGTACAGCGAGAGGGCTAGTTTACTTGCATGAGCAGTGTGATCCCAAAATT
ATCCATCGTGATGTCAAAGCAGCAAACATTCTGTTGGATGAAGAATTTGAGGCAGTAGTT
GGTGATTTTGGGTTGGCAAAGCTCTTGGATCACCACGATTCCCATGTGACTACTGCTGTT
AGGGGCACCATTGGCCACATTGCTCCAGAATATTTGTCTACTGGCCAATCGTCTGAAAAA
ACTGACGTTTTTGGGTTTGGAATCTTGCTACTTGAGCTGATTACAGGCCAGAAAGCTATG
GACTTTGGTCGAGGGGCCAACCAGAAAGGTGTTGTTATGCTTGATTGGGTGAGAAATCTG
CATCAAGAGGAGAAATTGAACCTTATGGTAGATAGCAATTTGAAAAATAACTTTGACCAG
ATTGAGCTAGAAGAGATGGTTAAAGTTGCCCTTCTATGCACCCATTTCAACCCTTCTCAT
CGCCCAAAAATGTCCGAAGCATTAAGGATGTTAGAAGGCGATGGATTGGCTGAAAAATGG
GAGGCATCACAAAAGCTCGAGACTCCAAGAAACCGAGCTTTTGAACATACACCACAAAGA
TATTCCAACTTCGTCGAAGACTCTTCACTAGTTGAACCAATGGAACTTTCTGGACCTAGA
TGA