Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035057
CDS Infomation

pacid=37442608 polypeptide=PGSC0003DMP400023843 locus=PGSC0003DMG400013481 ID=PGSC0003DMT400035057.v4.03 annot-version=v4.03
Sequence

ATGGATCAACTCGGAGATGATGATCAAGTTTCCATGACAATAGAGAGCCGTGAAATATTG
TTCTCTTCTGATTCCGAAGTTGAGTCTCCTAGTCCAACGTCGAATTGTCACTTCAGGTCG
TTGAAGAGAAATGGAATAATCAAACTTGAAGAACGTGACCAAGAGCATGATTTGATCAAG
GCAGGTTTTCTTAGTGGAATGGGACAATTGGGAAATGAAATTGAAGTTGTGGCTATACAC
AAAAATTCACGTTCAACTATATTGGGGCAAGCGAGGTCAGAAAGTTTTAGTATTTATTCC
GAAGCAATGCGGAAAAAATGTGGTGGAGATGCTAATATTAAATATGCTTGGATTGGTTCT
TCCAAAGATGAAATTTGTAAAATTATTTCACATGGATTTTCTACAATTATGGAACCAAAA
TCTGGAGATTGTTTTGGCAATGGTGTTCATCTTTATCCTACAAACATCGATGGGGTATTT
TCGGCAGTGGAAGATGAGAATGGATTAAGACATATGTTACTTTGCAGAGTAATATTAGGA
AATACAGAAGTAATTGAGGCTTCATCCAAACAATTTCAGCCAACTTGTCAAGATTTTGAC
TCTGGGGTTGACAATTATTTTGCTCCTAAAACATACATTATTTGGCCTTCTAATATGAAT
TCTCATATTTTACCAATTTTTCTAGTGAGTTTCAAGGGTCCATTATTATTAGGTAACTCT
TCAAAAATCAAGAAGATTCCATTGAATCCCACACCACGTATAAAATTTTCAAATTTATTG
CGTGTGCTTTCCAATTTTTTACATCCTTCAAGAATGGTTTTGATCTCAAAGATCTATGAA
GATTTTCAGAAAAACAAGATCTCAAAAATGGTATTTGTTCAGAAGTTGAGGCAAATAGCT
GGAGATACTTCACTACTTAAGAGTTGTCATGATATTGTATCCAAACACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400023843
PEP Infomation

pacid=37442608 transcript=PGSC0003DMT400035057 locus=PGSC0003DMG400013481 ID=PGSC0003DMT400035057.v4.03 annot-version=v4.03
Sequence

MDQLGDDDQVSMTIESREILFSSDSEVESPSPTSNCHFRSLKRNGIIKLEERDQEHDLIK
AGFLSGMGQLGNEIEVVAIHKNSRSTILGQARSESFSIYSEAMRKKCGGDANIKYAWIGS
SKDEICKIISHGFSTIMEPKSGDCFGNGVHLYPTNIDGVFSAVEDENGLRHMLLCRVILG
NTEVIEASSKQFQPTCQDFDSGVDNYFAPKTYIIWPSNMNSHILPIFLVSFKGPLLLGNS
SKIKKIPLNPTPRIKFSNLLRVLSNFLHPSRMVLISKIYEDFQKNKISKMVFVQKLRQIA
GDTSLLKSCHDIVSKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400035057
Transcript Infomation

pacid=37442608 locus=PGSC0003DMG400013481 ID=PGSC0003DMT400035057.v4.03 annot-version=v4.03
Sequence

ATGGATCAACTCGGAGATGATGATCAAGTTTCCATGACAATAGAGAGCCGTGAAATATTG
TTCTCTTCTGATTCCGAAGTTGAGTCTCCTAGTCCAACGTCGAATTGTCACTTCAGGTCG
TTGAAGAGAAATGGAATAATCAAACTTGAAGAACGTGACCAAGAGCATGATTTGATCAAG
GCAGGTTTTCTTAGTGGAATGGGACAATTGGGAAATGAAATTGAAGTTGTGGCTATACAC
AAAAATTCACGTTCAACTATATTGGGGCAAGCGAGGTCAGAAAGTTTTAGTATTTATTCC
GAAGCAATGCGGAAAAAATGTGGTGGAGATGCTAATATTAAATATGCTTGGATTGGTTCT
TCCAAAGATGAAATTTGTAAAATTATTTCACATGGATTTTCTACAATTATGGAACCAAAA
TCTGGAGATTGTTTTGGCAATGGTGTTCATCTTTATCCTACAAACATCGATGGGGTATTT
TCGGCAGTGGAAGATGAGAATGGATTAAGACATATGTTACTTTGCAGAGTAATATTAGGA
AATACAGAAGTAATTGAGGCTTCATCCAAACAATTTCAGCCAACTTGTCAAGATTTTGAC
TCTGGGGTTGACAATTATTTTGCTCCTAAAACATACATTATTTGGCCTTCTAATATGAAT
TCTCATATTTTACCAATTTTTCTAGTGAGTTTCAAGGGTCCATTATTATTAGGTAACTCT
TCAAAAATCAAGAAGATTCCATTGAATCCCACACCACGTATAAAATTTTCAAATTTATTG
CGTGTGCTTTCCAATTTTTTACATCCTTCAAGAATGGTTTTGATCTCAAAGATCTATGAA
GATTTTCAGAAAAACAAGATCTCAAAAATGGTATTTGTTCAGAAGTTGAGGCAAATAGCT
GGAGATACTTCACTACTTAAGAGTTGTCATGATATTGTATCCAAACACTAA