Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035054
CDS Infomation

pacid=37445306 polypeptide=PGSC0003DMP400023840 locus=PGSC0003DMG400013480 ID=PGSC0003DMT400035054.v4.03 annot-version=v4.03
Sequence

ATGTTGGACATAAATCTCTTCAGAAAGAATCCAGAAATTATACGTGAATCCCAACGTCGT
CGTTTTGGCGACGTCACTCTCGTGGATCAGGTCATTCAACTCGACAAAGAATGGCGTCAC
AGGCAGTTTGAGCTTGATAACTTGCGGAAAGATTTCAAAAAGATCAGCAAAGAAGTTGCC
AGGCTAAAAAATTCTGGTGAGGATGCAAGTCAAAATATTAAGGACACTGCAAAGAACAAG
CAACAAATTGAAAAGAAAGAGGCAGAGGTACAAGAGGTTCGAGCCACTTTGTATTCAAAG
ATGGAAATCATTGGTAACCTTGTGCACGATTCGGTGCCAATTAGTAATGATGAGGCAAAT
AATGTTATAGTCCGGTCATGGGGAGAGAAGCGGACTGAGAAAAGTCTGAAAAACCATGTT
GATCTCGTTAAAGATCTCGGAATTGCAGACATACCAAAGGGTGCAAACGTTGCTGGAGGA
AGAGGTTACTATCTGAAAGGGGCTGGTGTACGTCTTAATCAAGCGTTGATTAATTTTGCT
CTTGATTTCTTGGAAAAGAGGGAATATACTCCATTGCAGACTCCGTTCTTCATGAGGAAA
GATATTATGGCAAAATGTGCTCAATTAGCTCAGTTTGATGAAGAACTTTACAAGGTAACT
GGTGAAGGAGATGATAAATATCTGATTGCCACCGCTGAACAACCTCTGTGTGCTTATCAT
TTGGATGACTGGATTCATCCTTCACAGCTTCCGTTAAGGTATGCTGGATATTCTACATGC
TTCCGCAAGGAAGCTGGTTCACATGGCCGCGACACGCTTGGCATCTTTAGAGTCCACCAG
TTTGAGAAAGTGGAACAGTTTTGTCTGACCAGTCCAAATGGCAATGACTCCTGGGATATG
CATGAGGAGATGATTAAAAATTCAGAGGAATTCTTTCAGCAGCTAAAGCTTCCTTACCAA
ATTGTGGCTATTGTTTCTGGCGCACTGAATGACGCAGCAGCAAAGAAGTATGATTTAGAA
GGATGGTACCCTGCATCATCAACTTATAGAGAGCTTGTGTCCTGCTCAAACTGCACAGAT
TACCAGTCGAGAAAATTGGAAATTCGGTTTGGACAGAAGGTTAATGAGCAAACTAAGCAG
TACGTGCATTTATTGAACTCAACCCTTACAGCGACAGAAAGGACTATGTGTTGTATACTT
GAAAACTACCAGACGGAGGACGGAGTTGAAATTCCTGAAGTTCTACAGCCATACATGGGT
GGGAAGACATTCATGCCTTTCCAGGACCCTCCGGTAAAAGAAGTGAAAGGAAAGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023840
PEP Infomation

pacid=37445306 transcript=PGSC0003DMT400035054 locus=PGSC0003DMG400013480 ID=PGSC0003DMT400035054.v4.03 annot-version=v4.03
Sequence

MLDINLFRKNPEIIRESQRRRFGDVTLVDQVIQLDKEWRHRQFELDNLRKDFKKISKEVA
RLKNSGEDASQNIKDTAKNKQQIEKKEAEVQEVRATLYSKMEIIGNLVHDSVPISNDEAN
NVIVRSWGEKRTEKSLKNHVDLVKDLGIADIPKGANVAGGRGYYLKGAGVRLNQALINFA
LDFLEKREYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYH
LDDWIHPSQLPLRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNGNDSWDM
HEEMIKNSEEFFQQLKLPYQIVAIVSGALNDAAAKKYDLEGWYPASSTYRELVSCSNCTD
YQSRKLEIRFGQKVNEQTKQYVHLLNSTLTATERTMCCILENYQTEDGVEIPEVLQPYMG
GKTFMPFQDPPVKEVKGKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400035054
Transcript Infomation

pacid=37445306 locus=PGSC0003DMG400013480 ID=PGSC0003DMT400035054.v4.03 annot-version=v4.03
Sequence

ATGTTGGACATAAATCTCTTCAGAAAGAATCCAGAAATTATACGTGAATCCCAACGTCGT
CGTTTTGGCGACGTCACTCTCGTGGATCAGGTCATTCAACTCGACAAAGAATGGCGTCAC
AGGCAGTTTGAGCTTGATAACTTGCGGAAAGATTTCAAAAAGATCAGCAAAGAAGTTGCC
AGGCTAAAAAATTCTGGTGAGGATGCAAGTCAAAATATTAAGGACACTGCAAAGAACAAG
CAACAAATTGAAAAGAAAGAGGCAGAGGTACAAGAGGTTCGAGCCACTTTGTATTCAAAG
ATGGAAATCATTGGTAACCTTGTGCACGATTCGGTGCCAATTAGTAATGATGAGGCAAAT
AATGTTATAGTCCGGTCATGGGGAGAGAAGCGGACTGAGAAAAGTCTGAAAAACCATGTT
GATCTCGTTAAAGATCTCGGAATTGCAGACATACCAAAGGGTGCAAACGTTGCTGGAGGA
AGAGGTTACTATCTGAAAGGGGCTGGTGTACGTCTTAATCAAGCGTTGATTAATTTTGCT
CTTGATTTCTTGGAAAAGAGGGAATATACTCCATTGCAGACTCCGTTCTTCATGAGGAAA
GATATTATGGCAAAATGTGCTCAATTAGCTCAGTTTGATGAAGAACTTTACAAGGTAACT
GGTGAAGGAGATGATAAATATCTGATTGCCACCGCTGAACAACCTCTGTGTGCTTATCAT
TTGGATGACTGGATTCATCCTTCACAGCTTCCGTTAAGGTATGCTGGATATTCTACATGC
TTCCGCAAGGAAGCTGGTTCACATGGCCGCGACACGCTTGGCATCTTTAGAGTCCACCAG
TTTGAGAAAGTGGAACAGTTTTGTCTGACCAGTCCAAATGGCAATGACTCCTGGGATATG
CATGAGGAGATGATTAAAAATTCAGAGGAATTCTTTCAGCAGCTAAAGCTTCCTTACCAA
ATTGTGGCTATTGTTTCTGGCGCACTGAATGACGCAGCAGCAAAGAAGTATGATTTAGAA
GGATGGTACCCTGCATCATCAACTTATAGAGAGCTTGTGTCCTGCTCAAACTGCACAGAT
TACCAGTCGAGAAAATTGGAAATTCGGTTTGGACAGAAGGTTAATGAGCAAACTAAGCAG
TACGTGCATTTATTGAACTCAACCCTTACAGCGACAGAAAGGACTATGTGTTGTATACTT
GAAAACTACCAGACGGAGGACGGAGTTGAAATTCCTGAAGTTCTACAGCCATACATGGGT
GGGAAGACATTCATGCCTTTCCAGGACCCTCCGGTAAAAGAAGTGAAAGGAAAGAAGTGA