Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035010
CDS Infomation

pacid=37462850 polypeptide=PGSC0003DMP400023816 locus=PGSC0003DMG401013464 ID=PGSC0003DMT400035010.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGTTCAACAAAAGCTCTTAGATATCCCAAATGAAGAAATATGTGAGGATGAA
AATTCCAACATTGAATCAAGTGGATCAACTCATTCTTGTTCCTACTTTGCTAAGCATAAA
TGGTGGTACCAAGTTGCCATTTTTACCCTTTTTACTCTAATTGGAGAAGTAGTAACAACA
CTATTGGTTAAAACATATTTTACCAAAGGTGGTAAAAGTATATGGTTAGTCTCATTAGTG
CAAAATGCAGGGTTCCCAATTCTTCTTCCTTTCCTATACTATGTCTCACTCAAAAATAAT
AGCCAAATTGAGGTAATTGAAGGAAATCAAGAACCCCATATTTGCATAATCTTTTTAGTT
TATGTTGTTCTAGGTGTGTTACTTGGTGGGGTTAGTGTTTTCAACTCGGTCGGTCTAAAG
TACCTTCAAGTCTCAACGTACTCTCTCACTAGTACCACTCGACTAGGGTTCACTATTATC
TTCTCTTTATTCCACAGTGCACATAAGTTCACCCCAGCTATAGTAAACTCTATAGTTCTT
GTAATAGCTGCCTCAGTCATTCTGGTGGTTCATAATAATGAGTCCGGGGAAATGTCTAGT
GGAAAGTTTTTGCTAGGGTTTTTTTCTACGATTGGTGGGTCTGTGACATATTCCTTAGTG
CTTTCTCTAACTGAATTTTCGTATCGAAAAATAATAAAGGGTAGGAAGTTCATAGATATT
ATAGAGATGTCAATTTACCAAACCCTAGTTGCAAGCATAGTGATCCTACTAGGTTTTTTT
ATAAGTGGAGATTGGAAGAATTTAATCATGGAGATGGAAAAATACCAATTAGGGAAATTA
TCTTATGTAGTCATCTTGTTTTTTATAGCCATTTCATGTCAATTAAAAGTTGTGGCTTCA
ATTGGGCTAGTTTTTAAAGTCAACCCCCTAATGTCCAATGTTTTTAACAATTTAGGGGCT
CCAATTACTCCAATTTTTTCTGTGATTTTTCTTCATGATAAGATTAAAGGTTTAAAGTTG
GTGATTATGTTTTTAGCCTTTTGGGGATTTGGTTCACAAATTTATCAACAATATCTCAAT
CATATGGAGGCCAAGGAAGAGTTAATAGAACAAAACTCTAAAGAAGTTTCCTCTAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023816
PEP Infomation

pacid=37462850 transcript=PGSC0003DMT400035010 locus=PGSC0003DMG401013464 ID=PGSC0003DMT400035010.v4.03 annot-version=v4.03
Sequence

MEEVQQKLLDIPNEEICEDENSNIESSGSTHSCSYFAKHKWWYQVAIFTLFTLIGEVVTT
LLVKTYFTKGGKSIWLVSLVQNAGFPILLPFLYYVSLKNNSQIEVIEGNQEPHICIIFLV
YVVLGVLLGGVSVFNSVGLKYLQVSTYSLTSTTRLGFTIIFSLFHSAHKFTPAIVNSIVL
VIAASVILVVHNNESGEMSSGKFLLGFFSTIGGSVTYSLVLSLTEFSYRKIIKGRKFIDI
IEMSIYQTLVASIVILLGFFISGDWKNLIMEMEKYQLGKLSYVVILFFIAISCQLKVVAS
IGLVFKVNPLMSNVFNNLGAPITPIFSVIFLHDKIKGLKLVIMFLAFWGFGSQIYQQYLN
HMEAKEELIEQNSKEVSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400035010
Transcript Infomation

pacid=37462850 locus=PGSC0003DMG401013464 ID=PGSC0003DMT400035010.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGTTCAACAAAAGCTCTTAGATATCCCAAATGAAGAAATATGTGAGGATGAA
AATTCCAACATTGAATCAAGTGGATCAACTCATTCTTGTTCCTACTTTGCTAAGCATAAA
TGGTGGTACCAAGTTGCCATTTTTACCCTTTTTACTCTAATTGGAGAAGTAGTAACAACA
CTATTGGTTAAAACATATTTTACCAAAGGTGGTAAAAGTATATGGTTAGTCTCATTAGTG
CAAAATGCAGGGTTCCCAATTCTTCTTCCTTTCCTATACTATGTCTCACTCAAAAATAAT
AGCCAAATTGAGGTAATTGAAGGAAATCAAGAACCCCATATTTGCATAATCTTTTTAGTT
TATGTTGTTCTAGGTGTGTTACTTGGTGGGGTTAGTGTTTTCAACTCGGTCGGTCTAAAG
TACCTTCAAGTCTCAACGTACTCTCTCACTAGTACCACTCGACTAGGGTTCACTATTATC
TTCTCTTTATTCCACAGTGCACATAAGTTCACCCCAGCTATAGTAAACTCTATAGTTCTT
GTAATAGCTGCCTCAGTCATTCTGGTGGTTCATAATAATGAGTCCGGGGAAATGTCTAGT
GGAAAGTTTTTGCTAGGGTTTTTTTCTACGATTGGTGGGTCTGTGACATATTCCTTAGTG
CTTTCTCTAACTGAATTTTCGTATCGAAAAATAATAAAGGGTAGGAAGTTCATAGATATT
ATAGAGATGTCAATTTACCAAACCCTAGTTGCAAGCATAGTGATCCTACTAGGTTTTTTT
ATAAGTGGAGATTGGAAGAATTTAATCATGGAGATGGAAAAATACCAATTAGGGAAATTA
TCTTATGTAGTCATCTTGTTTTTTATAGCCATTTCATGTCAATTAAAAGTTGTGGCTTCA
ATTGGGCTAGTTTTTAAAGTCAACCCCCTAATGTCCAATGTTTTTAACAATTTAGGGGCT
CCAATTACTCCAATTTTTTCTGTGATTTTTCTTCATGATAAGATTAAAGGTTTAAAGTTG
GTGATTATGTTTTTAGCCTTTTGGGGATTTGGTTCACAAATTTATCAACAATATCTCAAT
CATATGGAGGCCAAGGAAGAGTTAATAGAACAAAACTCTAAAGAAGTTTCCTCTAGTTGA