Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034999
CDS Infomation

pacid=37462770 polypeptide=PGSC0003DMP400023806 locus=PGSC0003DMG400013455 ID=PGSC0003DMT400034999.v4.03 annot-version=v4.03
Sequence

ATGCCGCCTCAATTTCACCTTCCCCAAACTATAAAAACTCAACCCGCTAAAAAATCCGAC
CCGAATCCTCTCCAATCGGATGACCCGATCATCGTGGTCGATCTCGTATGGCCATTCGGA
GATCTAGAAGGACTTGATCGGGATGATTTTCGAGAGGCAGCTTACGAGATTTTCTTCACG
GCGTGTAGGTCATCGCCGGGGTTTGGTGGTAGGACGGCGGCAATTTCTTCGTCATCGGAC
GGGTCGGGTGAAGGAAATGGATCCGGGTCGGGTTCGGGTTTGTCGGGTCCCGGGTCACCG
AAACCGACCGGGGTAGGGATGGCGATAACTAGTAGGGTGAAAACGGCGTTGGGGTTGAAG
ATGTTGAAGAAGTCTCCATCACGGAGGAAGTCTGGTGGCGGTGGTGGTGTTAATGGTCCG
TCTTCACCTGCTGGAGTTGCGAGCCCGAGGACACCCTCGGGCTCGACGGTGCAGCAGGCG
AAGATACGGAGGCCGTTGACGTCCGCCGAGATTATGAGGTTGCAGATGAGAGTGTCGGAG
CAGAGTGATAATAGGCTAAGGAAAACTCTTATGAGAACTCTTGTAGGCCAAATTGGGAGG
AGAGCAGAGACAATAATCTTACCATTGGAGCTTTTACGCCACCTTAAACCATCCGAATTC
AACGATCCTCAAGAATACCATCTATGGCAAAAGCGTCAGCTTCGTATCCTGGATATAGGC
CTACTCCTTCACCCTTCTATCCCAGTAGAAAAAGACAATGCATCTGCATCGCGATTACTA
GAGATCATTCAAGCTTGTGAGATCAAAACAATCGACACTAGCAAGAATTCCGAGACCATG
AAATCACTATGTAATGCAGTAGTCTCCTTAGCTTGGAGAAGTGTTGATGACACTCCTAGT
GATACATGTCGTTGGGCTGATGGATTCCCTCTCAACATCCACATTTACACGGCTCTCTTA
GGCTCGATATTTGATCTTAAAGACGATACTTTAGTCCTCAATGAGGTTGATGAACTTCTT
GAATTGATGAAAAAGACATGGTCTACATTAGGTATTACTAGATCAATTCATAACTTGTGT
TTTACATGGGTGCTTTTCGAGCAATATGTTGTGACTAACCAAGTCGAGCCTGATCTTCTT
GGTGCAACATTGACTATGTTAACGGAAGTTGCAAATGATGCTAAGAAAGTAGACAGGGAT
CCTATTTATCTTAAGATGTTAAAGAGTGTTTTAGGCTCGATGAAACGATGGTGTGAAAAG
AGATTGTTGAATTATCATGCCAGTTTTCACGCGGAAAATATTGGCCTAATGGAAAATATT
ATCCCTCTTATGTTCTCTGCTTCGAAAATATTAGAGGAAGATGTTCCGGGATATGTATCT
TCTGCTGCTGAGAAAGGGGATGTGAAAGATGATTCAACGGGGAATCGAGTGAATCACTTT
ATCCGTTCATCGTTAAGGACTGCATTCAATAAGATGTTGGAAGAACGGAATATAAACATC
ACAACTTTTGAAAATGACGATGTGATAGAGACACTCATCAAGTTAGCTAATGCAACTGAA
GAATTGGCAGCTAAGGAGAAGGAAGTTTTCACTCCCGTCCTCAAGAAATGGCATCCGATT
GCAGCCGGTGTTGCAGCAGTGACGTTACATACTTGTTATGGAACTTTGTTAAGGCAATAC
CTTGCAGGTACAACATTCCTCACGAGTGAGACAGCGTTAGTGTTGCAGAGGGCTGGGAAA
CTCGAAAAGGTTTTAGTCCAAATGGTGGTGGAAGATTCTGTAGATTGCGAGGACGGAGGC
AAACTGATGGTGAGGGAGATGATTCCTTATGAAGTTGACTCAATCAAAATTAATTTATTG
AGGAAATGGATCCAAGATAGTTTGAAGAAAGGGAAAGATGTTCTTGTGAGATCAAAAGAT
TCTGAAACATGGAATCCAAAATCCAAAAGTGAGCCGTATGCACAATCAGCAATTGATCTA
GTGAGACATTCCAAGGAAGCAGTGGACAATTTCTTCGAAATTCCTACAATCATCACTGAG
AATTTGGTTAACGATATCACTGATGGCATCGAGAACTTATTCAAAGATTATGTGATCTTT
GTTGCATCATGTGGGGCTAAACAGAACTACATGCCTGCACTTCCTCCTTTAACAAGATGT
GGCCAAGACACAAAATTTGTGAAGCTGTGGAAGAAAGCTGCCTGTAGTGTCGGATCAAAC
GATCCAAACCAGCATTTGACAGACGAAGATAACAATCCCCGTCCTTCAACAAGCCGAGGA
ACTCAACGCCTTTATGTAAGGCTTAACACCTTGCATTACCTCCTTCAACAGCTCAATTCC
CTCGACAAGACTCTATCGCTCTCCTCAAGAGTCATCGCTTCACCAGGAAGCCGTTACAAC
AAGAACAGACAGCTAGCATGCTGTTCCTTTTTCGATCAAACACGTTCATCCATTCAAGCA
TCTGTCCAACTCGTATCAGAAGTAGCTGCTTATCGTCTAATGTTCTTCGATTCCAACTCT
GTCTTCTACGCTAGCCTATACGTAGGGGACGTAGAGAATGCACGTATCCGTCCAGCACTA
AGGATACTCAAACAAAACCTAACTCTTTTGTGTGCTATCCTCACTGACCGGGCTCAACCA
TTAGCGCTTAAAGAAGTCATGAGGGCGTCTTTCGAGGCATACCTAATGGTTTTACTAGCC
GGTGGACCGCGTAGAAACTTCTTGAGGATGGATCATCAAATGATTGAGGAAGATTTTGAA
AGTTTAAAGAGGGTGTTTTGTACTTGTGGTGAAGGTTTGATACTAGAAGATGTTGTGGAA
AAAGAAGCTGCAATAGTTGAAGAGATAGTGTCTTTAATGGGACAATCAACAGAACAATTG
GTTGAAGATTTTAGCAATTTGGCTTGTGAAGCAAGTGGAGTTGGAGTTGTTGTGGGAAAT
GGACAAAAATTACTTATGCCACCAACAACAGGAAAATGGAATAGAACAGATGCTAACACA
ATCTTGAGGGTACTTTGTCATAGAAATGATAAAATTGCTAATAATTTCTTGAAGAAAACA
TTCCACTTGGCAAAGAGGAGGGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400023806
PEP Infomation

pacid=37462770 transcript=PGSC0003DMT400034999 locus=PGSC0003DMG400013455 ID=PGSC0003DMT400034999.v4.03 annot-version=v4.03
Sequence

MPPQFHLPQTIKTQPAKKSDPNPLQSDDPIIVVDLVWPFGDLEGLDRDDFREAAYEIFFT
ACRSSPGFGGRTAAISSSSDGSGEGNGSGSGSGLSGPGSPKPTGVGMAITSRVKTALGLK
MLKKSPSRRKSGGGGGVNGPSSPAGVASPRTPSGSTVQQAKIRRPLTSAEIMRLQMRVSE
QSDNRLRKTLMRTLVGQIGRRAETIILPLELLRHLKPSEFNDPQEYHLWQKRQLRILDIG
LLLHPSIPVEKDNASASRLLEIIQACEIKTIDTSKNSETMKSLCNAVVSLAWRSVDDTPS
DTCRWADGFPLNIHIYTALLGSIFDLKDDTLVLNEVDELLELMKKTWSTLGITRSIHNLC
FTWVLFEQYVVTNQVEPDLLGATLTMLTEVANDAKKVDRDPIYLKMLKSVLGSMKRWCEK
RLLNYHASFHAENIGLMENIIPLMFSASKILEEDVPGYVSSAAEKGDVKDDSTGNRVNHF
IRSSLRTAFNKMLEERNINITTFENDDVIETLIKLANATEELAAKEKEVFTPVLKKWHPI
AAGVAAVTLHTCYGTLLRQYLAGTTFLTSETALVLQRAGKLEKVLVQMVVEDSVDCEDGG
KLMVREMIPYEVDSIKINLLRKWIQDSLKKGKDVLVRSKDSETWNPKSKSEPYAQSAIDL
VRHSKEAVDNFFEIPTIITENLVNDITDGIENLFKDYVIFVASCGAKQNYMPALPPLTRC
GQDTKFVKLWKKAACSVGSNDPNQHLTDEDNNPRPSTSRGTQRLYVRLNTLHYLLQQLNS
LDKTLSLSSRVIASPGSRYNKNRQLACCSFFDQTRSSIQASVQLVSEVAAYRLMFFDSNS
VFYASLYVGDVENARIRPALRILKQNLTLLCAILTDRAQPLALKEVMRASFEAYLMVLLA
GGPRRNFLRMDHQMIEEDFESLKRVFCTCGEGLILEDVVEKEAAIVEEIVSLMGQSTEQL
VEDFSNLACEASGVGVVVGNGQKLLMPPTTGKWNRTDANTILRVLCHRNDKIANNFLKKT
FHLAKRRG*

Transcript Sequence

Transcript ID

PGSC0003DMT400034999
Transcript Infomation

pacid=37462770 locus=PGSC0003DMG400013455 ID=PGSC0003DMT400034999.v4.03 annot-version=v4.03
Sequence

ATGCCGCCTCAATTTCACCTTCCCCAAACTATAAAAACTCAACCCGCTAAAAAATCCGAC
CCGAATCCTCTCCAATCGGATGACCCGATCATCGTGGTCGATCTCGTATGGCCATTCGGA
GATCTAGAAGGACTTGATCGGGATGATTTTCGAGAGGCAGCTTACGAGATTTTCTTCACG
GCGTGTAGGTCATCGCCGGGGTTTGGTGGTAGGACGGCGGCAATTTCTTCGTCATCGGAC
GGGTCGGGTGAAGGAAATGGATCCGGGTCGGGTTCGGGTTTGTCGGGTCCCGGGTCACCG
AAACCGACCGGGGTAGGGATGGCGATAACTAGTAGGGTGAAAACGGCGTTGGGGTTGAAG
ATGTTGAAGAAGTCTCCATCACGGAGGAAGTCTGGTGGCGGTGGTGGTGTTAATGGTCCG
TCTTCACCTGCTGGAGTTGCGAGCCCGAGGACACCCTCGGGCTCGACGGTGCAGCAGGCG
AAGATACGGAGGCCGTTGACGTCCGCCGAGATTATGAGGTTGCAGATGAGAGTGTCGGAG
CAGAGTGATAATAGGCTAAGGAAAACTCTTATGAGAACTCTTGTAGGCCAAATTGGGAGG
AGAGCAGAGACAATAATCTTACCATTGGAGCTTTTACGCCACCTTAAACCATCCGAATTC
AACGATCCTCAAGAATACCATCTATGGCAAAAGCGTCAGCTTCGTATCCTGGATATAGGC
CTACTCCTTCACCCTTCTATCCCAGTAGAAAAAGACAATGCATCTGCATCGCGATTACTA
GAGATCATTCAAGCTTGTGAGATCAAAACAATCGACACTAGCAAGAATTCCGAGACCATG
AAATCACTATGTAATGCAGTAGTCTCCTTAGCTTGGAGAAGTGTTGATGACACTCCTAGT
GATACATGTCGTTGGGCTGATGGATTCCCTCTCAACATCCACATTTACACGGCTCTCTTA
GGCTCGATATTTGATCTTAAAGACGATACTTTAGTCCTCAATGAGGTTGATGAACTTCTT
GAATTGATGAAAAAGACATGGTCTACATTAGGTATTACTAGATCAATTCATAACTTGTGT
TTTACATGGGTGCTTTTCGAGCAATATGTTGTGACTAACCAAGTCGAGCCTGATCTTCTT
GGTGCAACATTGACTATGTTAACGGAAGTTGCAAATGATGCTAAGAAAGTAGACAGGGAT
CCTATTTATCTTAAGATGTTAAAGAGTGTTTTAGGCTCGATGAAACGATGGTGTGAAAAG
AGATTGTTGAATTATCATGCCAGTTTTCACGCGGAAAATATTGGCCTAATGGAAAATATT
ATCCCTCTTATGTTCTCTGCTTCGAAAATATTAGAGGAAGATGTTCCGGGATATGTATCT
TCTGCTGCTGAGAAAGGGGATGTGAAAGATGATTCAACGGGGAATCGAGTGAATCACTTT
ATCCGTTCATCGTTAAGGACTGCATTCAATAAGATGTTGGAAGAACGGAATATAAACATC
ACAACTTTTGAAAATGACGATGTGATAGAGACACTCATCAAGTTAGCTAATGCAACTGAA
GAATTGGCAGCTAAGGAGAAGGAAGTTTTCACTCCCGTCCTCAAGAAATGGCATCCGATT
GCAGCCGGTGTTGCAGCAGTGACGTTACATACTTGTTATGGAACTTTGTTAAGGCAATAC
CTTGCAGGTACAACATTCCTCACGAGTGAGACAGCGTTAGTGTTGCAGAGGGCTGGGAAA
CTCGAAAAGGTTTTAGTCCAAATGGTGGTGGAAGATTCTGTAGATTGCGAGGACGGAGGC
AAACTGATGGTGAGGGAGATGATTCCTTATGAAGTTGACTCAATCAAAATTAATTTATTG
AGGAAATGGATCCAAGATAGTTTGAAGAAAGGGAAAGATGTTCTTGTGAGATCAAAAGAT
TCTGAAACATGGAATCCAAAATCCAAAAGTGAGCCGTATGCACAATCAGCAATTGATCTA
GTGAGACATTCCAAGGAAGCAGTGGACAATTTCTTCGAAATTCCTACAATCATCACTGAG
AATTTGGTTAACGATATCACTGATGGCATCGAGAACTTATTCAAAGATTATGTGATCTTT
GTTGCATCATGTGGGGCTAAACAGAACTACATGCCTGCACTTCCTCCTTTAACAAGATGT
GGCCAAGACACAAAATTTGTGAAGCTGTGGAAGAAAGCTGCCTGTAGTGTCGGATCAAAC
GATCCAAACCAGCATTTGACAGACGAAGATAACAATCCCCGTCCTTCAACAAGCCGAGGA
ACTCAACGCCTTTATGTAAGGCTTAACACCTTGCATTACCTCCTTCAACAGCTCAATTCC
CTCGACAAGACTCTATCGCTCTCCTCAAGAGTCATCGCTTCACCAGGAAGCCGTTACAAC
AAGAACAGACAGCTAGCATGCTGTTCCTTTTTCGATCAAACACGTTCATCCATTCAAGCA
TCTGTCCAACTCGTATCAGAAGTAGCTGCTTATCGTCTAATGTTCTTCGATTCCAACTCT
GTCTTCTACGCTAGCCTATACGTAGGGGACGTAGAGAATGCACGTATCCGTCCAGCACTA
AGGATACTCAAACAAAACCTAACTCTTTTGTGTGCTATCCTCACTGACCGGGCTCAACCA
TTAGCGCTTAAAGAAGTCATGAGGGCGTCTTTCGAGGCATACCTAATGGTTTTACTAGCC
GGTGGACCGCGTAGAAACTTCTTGAGGATGGATCATCAAATGATTGAGGAAGATTTTGAA
AGTTTAAAGAGGGTGTTTTGTACTTGTGGTGAAGGTTTGATACTAGAAGATGTTGTGGAA
AAAGAAGCTGCAATAGTTGAAGAGATAGTGTCTTTAATGGGACAATCAACAGAACAATTG
GTTGAAGATTTTAGCAATTTGGCTTGTGAAGCAAGTGGAGTTGGAGTTGTTGTGGGAAAT
GGACAAAAATTACTTATGCCACCAACAACAGGAAAATGGAATAGAACAGATGCTAACACA
ATCTTGAGGGTACTTTGTCATAGAAATGATAAAATTGCTAATAATTTCTTGAAGAAAACA
TTCCACTTGGCAAAGAGGAGGGGATGA