Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034962
CDS Infomation

pacid=37463563 polypeptide=PGSC0003DMP400023782 locus=PGSC0003DMG400013437 ID=PGSC0003DMT400034962.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCATAAGCTCTCTATCCCTCAAAACTCCAACAAAAATTCAATCTTTAACCAAA
ACCCATTACGCCATACCTCTCAATCTTCCTTTTTCATGCCGTTCCAAATCCAAAAGAACC
GGATCAATCGGGTCCCGGACCCGAATCCGTTGCGGGTTGTTGATAGAACCTGATGGAGGC
AAACTGGTAGAGCTTTTCGTTGAGGAATCACAAAGAGAATTGAAGAGAGAAGATGCTTTG
AAATTGCCCAAAATCAAGCTTACGAAGATTGATCTTGAATGGGTTCATGTGTTAAGTGAA
GGATGGGCTAGTCCATTGAAAGGGTTTATGAGAGAAGATGAGTTCCTCCAAACTCTTCAT
TTTAACTCGATTCGTCTTGAAGATGGGTCTGTTGTTAACATGTCGGTTCCGATTGTGCTC
GCCATTGATGATTCTCAGAAGAATCTAATTGGTGGGTCGAGCAGTGTTGCCCTTGTTGAT
GACGAAAACAATCCCATTGCCATTCTAAGCGATATCGAGATCTACAAGCATAACAAGGAA
GAACGGATAGCAAGAACTTGGGGCACCACTGCCCCAGGTCTTCCTTATGTGGATGAAGCT
ATAACTCATTCTGGAAACTGGCTAATTGGTGGCGATTTGAAAGTTATAGATCCAGTCAAG
TACAATGATGGTCTTGACAGGTTCCGGCTTTCACCTGCTGAACTTCGTGATGAATTTACA
AGGCGTAATGCAGATGCTGTTTTTGCCTTCCAACTGAGAAATCCTGTGCATAATGGCCAT
GCACTATTGATGACTGACACACGTCGGCGACTTCTCGAGATGGGATTCAAGAATCCTGTC
CTTTTGCTTCATCCTCTAGGAGGTTACACAAAAGCAGATGATGTTCCACTCCAGTGGAGA
ATGAAGCAACATGAGAAGGTACTTGAAGATGGGGTGCTTGATCCAGAGACAACTGTGGTT
TCTATATTCCCATCTCCCATGCACTATGCTGGTCCAACCGAGGTGCAATGGCATGCAAAG
GCTCGCATCAATGCAGGTGCTAACTTTTATATTGTGGGACGAGACCCAGCTGGAATGAGT
CATCCTCTGGAGAAGAGAGATCTGTATGATGCAGATCATGGCAAGAAAGTCCTCAGTATG
GCTCCGGGACTAGAACGACTGAATATCTTACCTTTCAGGGTGGCTGCATATGACAAGACT
AAGAATGGAATGGCTTTCTTTGACCCCTCTAGGCCTCAAGATTTTATCTTCATTTCAGGC
ACCAAGATGCGAACGCTTGCAAAGAACAACGAAAGCCCTCCGGATGGATTTATGTGCCCA
GGTGGTTGGAAGGTTTTGGTGGAATACTATGATAGTTTGGCTGCAGCTGAAAATGGCAGA
GTTGCTGAACCTGTGCCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023782
PEP Infomation

pacid=37463563 transcript=PGSC0003DMT400034962 locus=PGSC0003DMG400013437 ID=PGSC0003DMT400034962.v4.03 annot-version=v4.03
Sequence

MAAISSLSLKTPTKIQSLTKTHYAIPLNLPFSCRSKSKRTGSIGSRTRIRCGLLIEPDGG
KLVELFVEESQRELKREDALKLPKIKLTKIDLEWVHVLSEGWASPLKGFMREDEFLQTLH
FNSIRLEDGSVVNMSVPIVLAIDDSQKNLIGGSSSVALVDDENNPIAILSDIEIYKHNKE
ERIARTWGTTAPGLPYVDEAITHSGNWLIGGDLKVIDPVKYNDGLDRFRLSPAELRDEFT
RRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGFKNPVLLLHPLGGYTKADDVPLQWR
MKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMS
HPLEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTKNGMAFFDPSRPQDFIFISG
TKMRTLAKNNESPPDGFMCPGGWKVLVEYYDSLAAAENGRVAEPVPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400034962
Transcript Infomation

pacid=37463563 locus=PGSC0003DMG400013437 ID=PGSC0003DMT400034962.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCATAAGCTCTCTATCCCTCAAAACTCCAACAAAAATTCAATCTTTAACCAAA
ACCCATTACGCCATACCTCTCAATCTTCCTTTTTCATGCCGTTCCAAATCCAAAAGAACC
GGATCAATCGGGTCCCGGACCCGAATCCGTTGCGGGTTGTTGATAGAACCTGATGGAGGC
AAACTGGTAGAGCTTTTCGTTGAGGAATCACAAAGAGAATTGAAGAGAGAAGATGCTTTG
AAATTGCCCAAAATCAAGCTTACGAAGATTGATCTTGAATGGGTTCATGTGTTAAGTGAA
GGATGGGCTAGTCCATTGAAAGGGTTTATGAGAGAAGATGAGTTCCTCCAAACTCTTCAT
TTTAACTCGATTCGTCTTGAAGATGGGTCTGTTGTTAACATGTCGGTTCCGATTGTGCTC
GCCATTGATGATTCTCAGAAGAATCTAATTGGTGGGTCGAGCAGTGTTGCCCTTGTTGAT
GACGAAAACAATCCCATTGCCATTCTAAGCGATATCGAGATCTACAAGCATAACAAGGAA
GAACGGATAGCAAGAACTTGGGGCACCACTGCCCCAGGTCTTCCTTATGTGGATGAAGCT
ATAACTCATTCTGGAAACTGGCTAATTGGTGGCGATTTGAAAGTTATAGATCCAGTCAAG
TACAATGATGGTCTTGACAGGTTCCGGCTTTCACCTGCTGAACTTCGTGATGAATTTACA
AGGCGTAATGCAGATGCTGTTTTTGCCTTCCAACTGAGAAATCCTGTGCATAATGGCCAT
GCACTATTGATGACTGACACACGTCGGCGACTTCTCGAGATGGGATTCAAGAATCCTGTC
CTTTTGCTTCATCCTCTAGGAGGTTACACAAAAGCAGATGATGTTCCACTCCAGTGGAGA
ATGAAGCAACATGAGAAGGTACTTGAAGATGGGGTGCTTGATCCAGAGACAACTGTGGTT
TCTATATTCCCATCTCCCATGCACTATGCTGGTCCAACCGAGGTGCAATGGCATGCAAAG
GCTCGCATCAATGCAGGTGCTAACTTTTATATTGTGGGACGAGACCCAGCTGGAATGAGT
CATCCTCTGGAGAAGAGAGATCTGTATGATGCAGATCATGGCAAGAAAGTCCTCAGTATG
GCTCCGGGACTAGAACGACTGAATATCTTACCTTTCAGGGTGGCTGCATATGACAAGACT
AAGAATGGAATGGCTTTCTTTGACCCCTCTAGGCCTCAAGATTTTATCTTCATTTCAGGC
ACCAAGATGCGAACGCTTGCAAAGAACAACGAAAGCCCTCCGGATGGATTTATGTGCCCA
GGTGGTTGGAAGGTTTTGGTGGAATACTATGATAGTTTGGCTGCAGCTGAAAATGGCAGA
GTTGCTGAACCTGTGCCTTCTTGA