Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034944
CDS Infomation

pacid=37461605 polypeptide=PGSC0003DMP400023774 locus=PGSC0003DMG400013430 ID=PGSC0003DMT400034944.v4.03 annot-version=v4.03
Sequence

ATGCCTCCTACATACTTACCACTTCGTTGGGAGAGTACTGGAGACCAATGGTGGTATGCT
TCACCAATTGATTGGGCAGCTGCAAATGGTCACTATGATTTGGTGCGTGAGCTTCTTCGC
TTAGATGGAAATCACCTTATTAAGCTCACTTCACTACGTAGGATCAGACGGCTCGAGTCT
GTTTGGGATGATGAAGAGCAATTTGATGATGTTGCTAGATGTCGGTTACAGGTTGCAAGG
AAGCTTCACCTTGAATGTGAGACCAAGAAAGGGAAAAATTCCCTACTTACAGCTGGCTAT
GGTGGATGGCTATTATATACTGCGGCCTCTGCTGGAGACCTGGATTTTGTTCGAGAATTG
CTCGAAAAAGACTCCCTTTTGGTCTTTGGAGAAGGGGAGTATGGTGTCACTGACATATTA
TATGCTGCTGCTAGGAGTAAAAACTGCGATGTGTTTAAGGTTTTGTTTGATTTTGCTATG
TCTCCAAGGTTTATAGCATGTGGTGGCAGAGGTTTAGAGGAACAGATTGGGGAGATTCCA
TCTGCTTATAAATGGGAGATGATGAATAGAGCTATTCATGCAGCTGCTAGAGGAGGCAAT
CTTATGATACTGAAGGAGCTTCTTGTTGACTGCTCTGATGATATATTGGCTTACAGAGAC
ATTCAGGGTGCAACTCTCTTACATACGGCTGCTGGCAAAGGCCAGGTCGAGGTTGTTAAA
TATCTTTTAAAAAGTTCGGATATTATCGACTCCATAGACAACCAAGGCAACACTGCACTA
CATGTGGCTGCTTGTAGGGGCCAATTAGCTGTTGTTGAAGCTCTCATTGTTGCTTCACCT
TTGTTGATCCATACAAAAAACAATGCTGGAGAAACATTTCTTCATGTTGCCATTAGTGGT
TTCCAAACGCCTTATTTCCGCAGATTGGACCATCAAATCGATCTCATGAAGCAATTAGTT
TGTGGAAAAAATTCCAACGTTGAAGAGATTGTTAATGCTGAAAACAATGACGGTAGAACT
GCTCTTCATTTGGCTGTCATTGGAAATATTCATTCTGAACTTGTGGAGTTACTTATGACT
GTCCGATATATTAATGTCAATACTCGTGATAAGGATGGAATGACACCACTTGATATCCTG
AAGCAACGGCCACGTTCTGCTTCATCAGAGCTACTTACAAAGCAGTTGATATCTGCAGGG
GGGATTTTCAGTCATCTCGATTATTCTGCAAGAAGAGTTGTTGCATCCCATTTAAAGATG
CAGAATATAAATAGCAGTCCTGGAACTTCTTTTAGAATCTCGGACACTGAAATATTCTTA
TATACGGGTATTGAACATGCATCAGATGGCAGTAGAAATGCTGAGCTGAGTCATCCCTGC
ACGAGTCCTGATACCTATTGTTCTACAAATGGAAAGAAACCTGTTTCTGCAAATGATGCA
GCACAAAAACTGAAAGGCTTCTTCCATTGGCCAAAAATTAAGAAAAGAGATAGTAAGAGA
CTCAAGATATTGGTGGATCAAAGTTCTGCTAGTAATTCAGATGTGGCACCAGTTACTCTA
CGAGAAAGGTACTCAAAGCCCTCATCACTTCCGAACCACAAAAGGACTCTCTCTGCTAGT
AGTAACCTTCCAAGTCCGACAGCAAAGAAGAAATTTGCTTCAGGACTAGTAAACGGTGTC
ATGCAGGCCATACCACATCTTAGCCTCCCTCGTAGATCATCTCGTGCAAGTTCATTCTCG
ATTTCATCACTGTCTTCACGCAGTTCTATGGACAAACAAAAAGCAATTGTAATTGACACT
GAGCTTGCTGGAACTTCTTGTTCTCATCAGACAGAGGGTGCACCATCAGACTCGATACAC
AAACCAAGCGCAGGACATAAAAGGTTGGTGAACCAATATTTGTGTTTTGGTGCTTCAGGA
CGACCTGTCAAGGCTCCTTCAACCAGTATGCAGCCATATGACATCTATGAGCGGTCTGTC
CTATCCGCAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023774
PEP Infomation

pacid=37461605 transcript=PGSC0003DMT400034944 locus=PGSC0003DMG400013430 ID=PGSC0003DMT400034944.v4.03 annot-version=v4.03
Sequence

MPPTYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLES
VWDDEEQFDDVARCRLQVARKLHLECETKKGKNSLLTAGYGGWLLYTAASAGDLDFVREL
LEKDSLLVFGEGEYGVTDILYAAARSKNCDVFKVLFDFAMSPRFIACGGRGLEEQIGEIP
SAYKWEMMNRAIHAAARGGNLMILKELLVDCSDDILAYRDIQGATLLHTAAGKGQVEVVK
YLLKSSDIIDSIDNQGNTALHVAACRGQLAVVEALIVASPLLIHTKNNAGETFLHVAISG
FQTPYFRRLDHQIDLMKQLVCGKNSNVEEIVNAENNDGRTALHLAVIGNIHSELVELLMT
VRYINVNTRDKDGMTPLDILKQRPRSASSELLTKQLISAGGIFSHLDYSARRVVASHLKM
QNINSSPGTSFRISDTEIFLYTGIEHASDGSRNAELSHPCTSPDTYCSTNGKKPVSANDA
AQKLKGFFHWPKIKKRDSKRLKILVDQSSASNSDVAPVTLRERYSKPSSLPNHKRTLSAS
SNLPSPTAKKKFASGLVNGVMQAIPHLSLPRRSSRASSFSISSLSSRSSMDKQKAIVIDT
ELAGTSCSHQTEGAPSDSIHKPSAGHKRLVNQYLCFGASGRPVKAPSTSMQPYDIYERSV
LSAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400034944
Transcript Infomation

pacid=37461605 locus=PGSC0003DMG400013430 ID=PGSC0003DMT400034944.v4.03 annot-version=v4.03
Sequence

ATGCCTCCTACATACTTACCACTTCGTTGGGAGAGTACTGGAGACCAATGGTGGTATGCT
TCACCAATTGATTGGGCAGCTGCAAATGGTCACTATGATTTGGTGCGTGAGCTTCTTCGC
TTAGATGGAAATCACCTTATTAAGCTCACTTCACTACGTAGGATCAGACGGCTCGAGTCT
GTTTGGGATGATGAAGAGCAATTTGATGATGTTGCTAGATGTCGGTTACAGGTTGCAAGG
AAGCTTCACCTTGAATGTGAGACCAAGAAAGGGAAAAATTCCCTACTTACAGCTGGCTAT
GGTGGATGGCTATTATATACTGCGGCCTCTGCTGGAGACCTGGATTTTGTTCGAGAATTG
CTCGAAAAAGACTCCCTTTTGGTCTTTGGAGAAGGGGAGTATGGTGTCACTGACATATTA
TATGCTGCTGCTAGGAGTAAAAACTGCGATGTGTTTAAGGTTTTGTTTGATTTTGCTATG
TCTCCAAGGTTTATAGCATGTGGTGGCAGAGGTTTAGAGGAACAGATTGGGGAGATTCCA
TCTGCTTATAAATGGGAGATGATGAATAGAGCTATTCATGCAGCTGCTAGAGGAGGCAAT
CTTATGATACTGAAGGAGCTTCTTGTTGACTGCTCTGATGATATATTGGCTTACAGAGAC
ATTCAGGGTGCAACTCTCTTACATACGGCTGCTGGCAAAGGCCAGGTCGAGGTTGTTAAA
TATCTTTTAAAAAGTTCGGATATTATCGACTCCATAGACAACCAAGGCAACACTGCACTA
CATGTGGCTGCTTGTAGGGGCCAATTAGCTGTTGTTGAAGCTCTCATTGTTGCTTCACCT
TTGTTGATCCATACAAAAAACAATGCTGGAGAAACATTTCTTCATGTTGCCATTAGTGGT
TTCCAAACGCCTTATTTCCGCAGATTGGACCATCAAATCGATCTCATGAAGCAATTAGTT
TGTGGAAAAAATTCCAACGTTGAAGAGATTGTTAATGCTGAAAACAATGACGGTAGAACT
GCTCTTCATTTGGCTGTCATTGGAAATATTCATTCTGAACTTGTGGAGTTACTTATGACT
GTCCGATATATTAATGTCAATACTCGTGATAAGGATGGAATGACACCACTTGATATCCTG
AAGCAACGGCCACGTTCTGCTTCATCAGAGCTACTTACAAAGCAGTTGATATCTGCAGGG
GGGATTTTCAGTCATCTCGATTATTCTGCAAGAAGAGTTGTTGCATCCCATTTAAAGATG
CAGAATATAAATAGCAGTCCTGGAACTTCTTTTAGAATCTCGGACACTGAAATATTCTTA
TATACGGGTATTGAACATGCATCAGATGGCAGTAGAAATGCTGAGCTGAGTCATCCCTGC
ACGAGTCCTGATACCTATTGTTCTACAAATGGAAAGAAACCTGTTTCTGCAAATGATGCA
GCACAAAAACTGAAAGGCTTCTTCCATTGGCCAAAAATTAAGAAAAGAGATAGTAAGAGA
CTCAAGATATTGGTGGATCAAAGTTCTGCTAGTAATTCAGATGTGGCACCAGTTACTCTA
CGAGAAAGGTACTCAAAGCCCTCATCACTTCCGAACCACAAAAGGACTCTCTCTGCTAGT
AGTAACCTTCCAAGTCCGACAGCAAAGAAGAAATTTGCTTCAGGACTAGTAAACGGTGTC
ATGCAGGCCATACCACATCTTAGCCTCCCTCGTAGATCATCTCGTGCAAGTTCATTCTCG
ATTTCATCACTGTCTTCACGCAGTTCTATGGACAAACAAAAAGCAATTGTAATTGACACT
GAGCTTGCTGGAACTTCTTGTTCTCATCAGACAGAGGGTGCACCATCAGACTCGATACAC
AAACCAAGCGCAGGACATAAAAGGTTGGTGAACCAATATTTGTGTTTTGGTGCTTCAGGA
CGACCTGTCAAGGCTCCTTCAACCAGTATGCAGCCATATGACATCTATGAGCGGTCTGTC
CTATCCGCAGCTTGA