Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034923
CDS Infomation

pacid=37459200 polypeptide=PGSC0003DMP400023762 locus=PGSC0003DMG400013424 ID=PGSC0003DMT400034923.v4.03 annot-version=v4.03
Sequence

ATGGCGCTGAGCTTCTTCTCTCCGCCTGCTCTTCCAATCCATCGCATTACCTGTCAAGCT
CTCTCCGTTGCTGTCCCATCAGTAGCAGTAGCAGTAGCACCTCTCCCTGTAAACCCTAAT
TCTTCCTTGTCCTGCGCCCTCAACTGCACTCATTTCCAATCGTGTTCTGGTTGTACTCAA
GAGTACAATCTACATCATCCGGTTGTAATTGATGAAGCTATTGGTTTCTTCAACAAGCTC
GGAATCAAAGATTTTTCCTTTGACTCCTGTAGATTATGGGGATGGAGGTGTCGGGCTAAG
CTGGCTATTCGCGGTTCATCCACCAACCCCTTGATTGGGCTTTATGAGGAGGGCACTCAT
AATGTTGTTGATATCCCTGATTGTAAATCTCATCATCCAAACATCAATGCTGCTGTTCAG
CTCCTGAAGAAAGGGATAATTGAGTTGAATGTTGAACCATATGATGAAGATCAAGGCACT
GGTGACCTGAGGTATGTTCAGATGGCCGTCACCACACATGATACCTCCCTTCCTATCCCG
AAGAGATATAAGAATGGTAAAGTGCAGGTCTCTTTGGTTTGGAATTCGAGAAGCGAGAAT
TCAGCTAACACTGGAAAATTAAATGCTTTAGCCAATTTCCTATGGGGCAACGGTGGGCCA
AAGAGAAAAGTTCATTTAATTCATTCAGTTTGGGCTAATTTCCAGACATTATCAAATAAT
ATTATATTTGGAAACAGATGGAGACATTTGTTAGGGGAAAGAGATTTCTGGGAGCACATT
GGAGGGATTGATGTCTCTTTAGCTCCATCAAGCTTTGGGCAAGCAAATACGCGGGCTTTT
GATTCTTTGCTGCGGAAGTTACAGAAATATGTCCCTCAAGGTGCATCAGTTGTTGATCTC
TATGCAGGAGCTGGTGTAATTGGTTTGTCTTTGGCTGTTTCAAGGAAATGCAGGTCAGTT
AAATGTGTTGAGGTTAACAAAGAGTCCAGGCAATCTTTTGAGAAGACAGTGGAGCGCTTG
CCTACAAATGTCGAAAGCAATATCAGCTGGCACCATGCAGACGCTTCAATAGAACCAACT
TCATGGCTCTTGGGATCGGATGTTGTTGTGGTTGACCCTCCGAGGAAAGGACTGGACCCG
TCCTTGGTGAAGGAACTACGGCACATCTCAGCAGTGGAACTCAGAACATCTAAAAGACCT
GAAAAGGTCAAAGACGAGAAGAGACCGTGGATCCTGCGTGCCAGAGAAGATTCAATTCAA
ATTGAAAGCACAACTGTACATGAAGAAAATCAATCATTGCCTCAAACGCTTATCTATATT
AGCTGTGGCTGGGAAAGTTTTAAAGAGGATTGCTCGTCACTGCTAGCTAGTAAGGAATGG
CATTTGCATAAAGCCCATGGCTTTAATTTCTTTCCTGGAACACAAAGGTTTTGCCTTTCC
CTTAGTCCTACAGACAAGTTTAAACTTGTATTTGTTTCAACTAACATTAAATTTCATCCA
ACATGGTTACAAAATAACTTCTATTATTTATTATTGCCATTCACGTATATGCATAATAAA
CACAACTGCTTGAAGGAAGAAACTCTGTGCTGCACAAAAAGTTGTGAATTGTCTTCCAGC
ATAGTGTTATATCCGTGCCACTATGGAGAAGAGGATGGAAGATTCTCAATCACTGCTCAC
AAATACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023762
PEP Infomation

pacid=37459200 transcript=PGSC0003DMT400034923 locus=PGSC0003DMG400013424 ID=PGSC0003DMT400034923.v4.03 annot-version=v4.03
Sequence

MALSFFSPPALPIHRITCQALSVAVPSVAVAVAPLPVNPNSSLSCALNCTHFQSCSGCTQ
EYNLHHPVVIDEAIGFFNKLGIKDFSFDSCRLWGWRCRAKLAIRGSSTNPLIGLYEEGTH
NVVDIPDCKSHHPNINAAVQLLKKGIIELNVEPYDEDQGTGDLRYVQMAVTTHDTSLPIP
KRYKNGKVQVSLVWNSRSENSANTGKLNALANFLWGNGGPKRKVHLIHSVWANFQTLSNN
IIFGNRWRHLLGERDFWEHIGGIDVSLAPSSFGQANTRAFDSLLRKLQKYVPQGASVVDL
YAGAGVIGLSLAVSRKCRSVKCVEVNKESRQSFEKTVERLPTNVESNISWHHADASIEPT
SWLLGSDVVVVDPPRKGLDPSLVKELRHISAVELRTSKRPEKVKDEKRPWILRAREDSIQ
IESTTVHEENQSLPQTLIYISCGWESFKEDCSSLLASKEWHLHKAHGFNFFPGTQRFCLS
LSPTDKFKLVFVSTNIKFHPTWLQNNFYYLLLPFTYMHNKHNCLKEETLCCTKSCELSSS
IVLYPCHYGEEDGRFSITAHKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400034923
Transcript Infomation

pacid=37459200 locus=PGSC0003DMG400013424 ID=PGSC0003DMT400034923.v4.03 annot-version=v4.03
Sequence

ATGGCGCTGAGCTTCTTCTCTCCGCCTGCTCTTCCAATCCATCGCATTACCTGTCAAGCT
CTCTCCGTTGCTGTCCCATCAGTAGCAGTAGCAGTAGCACCTCTCCCTGTAAACCCTAAT
TCTTCCTTGTCCTGCGCCCTCAACTGCACTCATTTCCAATCGTGTTCTGGTTGTACTCAA
GAGTACAATCTACATCATCCGGTTGTAATTGATGAAGCTATTGGTTTCTTCAACAAGCTC
GGAATCAAAGATTTTTCCTTTGACTCCTGTAGATTATGGGGATGGAGGTGTCGGGCTAAG
CTGGCTATTCGCGGTTCATCCACCAACCCCTTGATTGGGCTTTATGAGGAGGGCACTCAT
AATGTTGTTGATATCCCTGATTGTAAATCTCATCATCCAAACATCAATGCTGCTGTTCAG
CTCCTGAAGAAAGGGATAATTGAGTTGAATGTTGAACCATATGATGAAGATCAAGGCACT
GGTGACCTGAGGTATGTTCAGATGGCCGTCACCACACATGATACCTCCCTTCCTATCCCG
AAGAGATATAAGAATGGTAAAGTGCAGGTCTCTTTGGTTTGGAATTCGAGAAGCGAGAAT
TCAGCTAACACTGGAAAATTAAATGCTTTAGCCAATTTCCTATGGGGCAACGGTGGGCCA
AAGAGAAAAGTTCATTTAATTCATTCAGTTTGGGCTAATTTCCAGACATTATCAAATAAT
ATTATATTTGGAAACAGATGGAGACATTTGTTAGGGGAAAGAGATTTCTGGGAGCACATT
GGAGGGATTGATGTCTCTTTAGCTCCATCAAGCTTTGGGCAAGCAAATACGCGGGCTTTT
GATTCTTTGCTGCGGAAGTTACAGAAATATGTCCCTCAAGGTGCATCAGTTGTTGATCTC
TATGCAGGAGCTGGTGTAATTGGTTTGTCTTTGGCTGTTTCAAGGAAATGCAGGTCAGTT
AAATGTGTTGAGGTTAACAAAGAGTCCAGGCAATCTTTTGAGAAGACAGTGGAGCGCTTG
CCTACAAATGTCGAAAGCAATATCAGCTGGCACCATGCAGACGCTTCAATAGAACCAACT
TCATGGCTCTTGGGATCGGATGTTGTTGTGGTTGACCCTCCGAGGAAAGGACTGGACCCG
TCCTTGGTGAAGGAACTACGGCACATCTCAGCAGTGGAACTCAGAACATCTAAAAGACCT
GAAAAGGTCAAAGACGAGAAGAGACCGTGGATCCTGCGTGCCAGAGAAGATTCAATTCAA
ATTGAAAGCACAACTGTACATGAAGAAAATCAATCATTGCCTCAAACGCTTATCTATATT
AGCTGTGGCTGGGAAAGTTTTAAAGAGGATTGCTCGTCACTGCTAGCTAGTAAGGAATGG
CATTTGCATAAAGCCCATGGCTTTAATTTCTTTCCTGGAACACAAAGGTTTTGCCTTTCC
CTTAGTCCTACAGACAAGTTTAAACTTGTATTTGTTTCAACTAACATTAAATTTCATCCA
ACATGGTTACAAAATAACTTCTATTATTTATTATTGCCATTCACGTATATGCATAATAAA
CACAACTGCTTGAAGGAAGAAACTCTGTGCTGCACAAAAAGTTGTGAATTGTCTTCCAGC
ATAGTGTTATATCCGTGCCACTATGGAGAAGAGGATGGAAGATTCTCAATCACTGCTCAC
AAATACTGA