Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034853
CDS Infomation

pacid=37464018 polypeptide=PGSC0003DMP400023709 locus=PGSC0003DMG400013398 ID=PGSC0003DMT400034853.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCTTCCTCCTCTGCAAAAGTGCACAGTGGACAAATTTTCAGCCATAGTAACC
AGAACTCACACTTTTATTCACTCAATAGCAATACTCTTCATGCTCTACTACAGACTAATA
ATCAATCTCAAGGAAATTCCAATCTCATTTTTACCTTATTGGTTCCTAATCTTCGTTTCC
GAGCTACTTCTCTCCTTCCTCAGGACACTCGACTCAGCTCATATATTCTCTCCAGTTACC
CGCTCCGTCTACCCGGAAAACTTGCCGCCGGACGATGAACTACCGGCAATCGACGTTTTT
GTATGTACGGCCGATCCGATAAAGGAACCGGCGTTGGGAGTTATGAACACTGTTTTATCA
GCGATGGTGATTGATTATCCGCCGGAGAAGGTAACAGTGTACCTTTCCGACGATGGCGGT
TCGGTTAAGACGCTGTGTGCGGTTCGTGAAGCGTGGAGATTTGGAGAAGTGTGGATTCCG
TTTTGCAGGGAATTTGGAGTGAAGAGGATTTGCCCTGAAACTTTTTTTCAAGCAGCTGAC
GATGAGATTAATGGCGGCGAGGATTATTTGCTAGAAAGAGACAACATTCAGAAAGAGTAC
GAGGAGTTCAAGGAGCGGTTGAAGAAAGCTCAAGAAAATGGAGGAACAAAGGATACTGGA
GTCCAATTTGGCCCAAATCGTGATACTGTAATTGAGATAATAGGCCAGAGAGGTTGTGGA
GCCAAAAATAATGGCAAAGCTAAACTATCATCTCTTGTTTATGTTTCAAGGGAGAAAAAT
ACTTCTCATCCCCATCATTTCAAAGCTGGAGCCCTCAATGTTCTTCTTAGAGTATCTGGA
ATCATAAGCAACTCACCATACATATTAATGTTGGATTGTGATATGCACTCCAATGATCCA
TCTTCAGCTAGACAAGCAATGTGCTTTCACCTTGATCCCAAAATCTCTCCCTCACTTGCA
TTTGTTCAGTTCCCTCAAAGATTTCGCAACATTAGCAAGAATGATATTTATGATTCTGCC
ATGAGAAATTGTTTTGTGGTCAGGTGGCCAGGGATGGATGGGCTTATAGGACCTATGCTA
TCTGGTACATGCTTCTATATGAAGAGGAAAGCTCTATATGGGACTGCTATACACAAAGAC
ATGGATCTTAGTGAGCTGAAGAAGTATTTTGGTTCCTCAAATGAATTCCTAAATACTGTT
ATTACATGCATTAATGATAAGCAAAATGACACTGGCATCAAGGAATTTGCTGACAATAAG
ATCCAAGAAGCAAGATTTTTAGCCTCTTGCACCTATGAGGAGGAGTCACAATGGGGAGAA
GAGATAGGATTCCTGTACCATTCAGTGGTGGAAGACTACTTCACAGGTTTCATTATGCAT
TGCAAAGGCTGGAAATCTGTGCTTTATAACCCTTCAAGGCCAGCATTTTTAGGCAGTAGT
ACAACAAATTTGAATGACACATTAGTTCAAGGAACAAGATGGAATTCTGGACTAGCTGAA
GTTCTTTTCTCAAGATTTTGTCCCCTCATCTATGGCTTGAAATCAAGACTGCCTCTTCTT
GAACGCATGTGTTATGCTTACCTTGCTTCTCAGCCTCTCTTTTGCTTCCCAGCTTGGTTT
TTAGCTAGCATTCCTCAGCTTTGTCTCCTAAATGGCATTCCCATTTACCCTAAGGTCTCA
AGTCCATGGTTCTTTGCATATTCTTTTCTTTTCTTGTCAACACTTTCGAAATACTTATGG
GATGTTGTAAACACTGGAGGGACAGTGAGAACATGGTGGAATGAATGGAGGGTATGGATG
ATAAAATCAATAACAACTTATTTCTATGGAACTTTGGATGCAATCGTGAAGTTTTATGGC
TTTAGAAAAGCAAGTTTTTTACCCACAAATAAAGTTGTTGATGATGAGCAATTGAAGAGG
TACCAAATGGGAATTTATGATTTCCAAGCATCTAAAATGCTAATTGTCCCTTTGGTTACA
TTAGTCATACTAAATATGATTTCCTTCACTTGGGGAGTTATTGGAAAAGTGATTCTAGAA
GGGAGATTGAGTGATTTGTTTGGTCAAGTGTTCCTCTCATTTTTCATCTTGGTGGTGAAT
TATCCTATAATTGAAGGGATGATATTGAGGAAAGACAAAGGAAGCATTCCACTCTTTGTG
ACTCTATTGTCTACTTTGCTTTCTTTTTGTCTTTTGTTCATTGGTTCTATTTTTGTAAGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400023709
PEP Infomation

pacid=37464018 transcript=PGSC0003DMT400034853 locus=PGSC0003DMG400013398 ID=PGSC0003DMT400034853.v4.03 annot-version=v4.03
Sequence

METLPPLQKCTVDKFSAIVTRTHTFIHSIAILFMLYYRLIINLKEIPISFLPYWFLIFVS
ELLLSFLRTLDSAHIFSPVTRSVYPENLPPDDELPAIDVFVCTADPIKEPALGVMNTVLS
AMVIDYPPEKVTVYLSDDGGSVKTLCAVREAWRFGEVWIPFCREFGVKRICPETFFQAAD
DEINGGEDYLLERDNIQKEYEEFKERLKKAQENGGTKDTGVQFGPNRDTVIEIIGQRGCG
AKNNGKAKLSSLVYVSREKNTSHPHHFKAGALNVLLRVSGIISNSPYILMLDCDMHSNDP
SSARQAMCFHLDPKISPSLAFVQFPQRFRNISKNDIYDSAMRNCFVVRWPGMDGLIGPML
SGTCFYMKRKALYGTAIHKDMDLSELKKYFGSSNEFLNTVITCINDKQNDTGIKEFADNK
IQEARFLASCTYEEESQWGEEIGFLYHSVVEDYFTGFIMHCKGWKSVLYNPSRPAFLGSS
TTNLNDTLVQGTRWNSGLAEVLFSRFCPLIYGLKSRLPLLERMCYAYLASQPLFCFPAWF
LASIPQLCLLNGIPIYPKVSSPWFFAYSFLFLSTLSKYLWDVVNTGGTVRTWWNEWRVWM
IKSITTYFYGTLDAIVKFYGFRKASFLPTNKVVDDEQLKRYQMGIYDFQASKMLIVPLVT
LVILNMISFTWGVIGKVILEGRLSDLFGQVFLSFFILVVNYPIIEGMILRKDKGSIPLFV
TLLSTLLSFCLLFIGSIFVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400034853
Transcript Infomation

pacid=37464018 locus=PGSC0003DMG400013398 ID=PGSC0003DMT400034853.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCTTCCTCCTCTGCAAAAGTGCACAGTGGACAAATTTTCAGCCATAGTAACC
AGAACTCACACTTTTATTCACTCAATAGCAATACTCTTCATGCTCTACTACAGACTAATA
ATCAATCTCAAGGAAATTCCAATCTCATTTTTACCTTATTGGTTCCTAATCTTCGTTTCC
GAGCTACTTCTCTCCTTCCTCAGGACACTCGACTCAGCTCATATATTCTCTCCAGTTACC
CGCTCCGTCTACCCGGAAAACTTGCCGCCGGACGATGAACTACCGGCAATCGACGTTTTT
GTATGTACGGCCGATCCGATAAAGGAACCGGCGTTGGGAGTTATGAACACTGTTTTATCA
GCGATGGTGATTGATTATCCGCCGGAGAAGGTAACAGTGTACCTTTCCGACGATGGCGGT
TCGGTTAAGACGCTGTGTGCGGTTCGTGAAGCGTGGAGATTTGGAGAAGTGTGGATTCCG
TTTTGCAGGGAATTTGGAGTGAAGAGGATTTGCCCTGAAACTTTTTTTCAAGCAGCTGAC
GATGAGATTAATGGCGGCGAGGATTATTTGCTAGAAAGAGACAACATTCAGAAAGAGTAC
GAGGAGTTCAAGGAGCGGTTGAAGAAAGCTCAAGAAAATGGAGGAACAAAGGATACTGGA
GTCCAATTTGGCCCAAATCGTGATACTGTAATTGAGATAATAGGCCAGAGAGGTTGTGGA
GCCAAAAATAATGGCAAAGCTAAACTATCATCTCTTGTTTATGTTTCAAGGGAGAAAAAT
ACTTCTCATCCCCATCATTTCAAAGCTGGAGCCCTCAATGTTCTTCTTAGAGTATCTGGA
ATCATAAGCAACTCACCATACATATTAATGTTGGATTGTGATATGCACTCCAATGATCCA
TCTTCAGCTAGACAAGCAATGTGCTTTCACCTTGATCCCAAAATCTCTCCCTCACTTGCA
TTTGTTCAGTTCCCTCAAAGATTTCGCAACATTAGCAAGAATGATATTTATGATTCTGCC
ATGAGAAATTGTTTTGTGGTCAGGTGGCCAGGGATGGATGGGCTTATAGGACCTATGCTA
TCTGGTACATGCTTCTATATGAAGAGGAAAGCTCTATATGGGACTGCTATACACAAAGAC
ATGGATCTTAGTGAGCTGAAGAAGTATTTTGGTTCCTCAAATGAATTCCTAAATACTGTT
ATTACATGCATTAATGATAAGCAAAATGACACTGGCATCAAGGAATTTGCTGACAATAAG
ATCCAAGAAGCAAGATTTTTAGCCTCTTGCACCTATGAGGAGGAGTCACAATGGGGAGAA
GAGATAGGATTCCTGTACCATTCAGTGGTGGAAGACTACTTCACAGGTTTCATTATGCAT
TGCAAAGGCTGGAAATCTGTGCTTTATAACCCTTCAAGGCCAGCATTTTTAGGCAGTAGT
ACAACAAATTTGAATGACACATTAGTTCAAGGAACAAGATGGAATTCTGGACTAGCTGAA
GTTCTTTTCTCAAGATTTTGTCCCCTCATCTATGGCTTGAAATCAAGACTGCCTCTTCTT
GAACGCATGTGTTATGCTTACCTTGCTTCTCAGCCTCTCTTTTGCTTCCCAGCTTGGTTT
TTAGCTAGCATTCCTCAGCTTTGTCTCCTAAATGGCATTCCCATTTACCCTAAGGTCTCA
AGTCCATGGTTCTTTGCATATTCTTTTCTTTTCTTGTCAACACTTTCGAAATACTTATGG
GATGTTGTAAACACTGGAGGGACAGTGAGAACATGGTGGAATGAATGGAGGGTATGGATG
ATAAAATCAATAACAACTTATTTCTATGGAACTTTGGATGCAATCGTGAAGTTTTATGGC
TTTAGAAAAGCAAGTTTTTTACCCACAAATAAAGTTGTTGATGATGAGCAATTGAAGAGG
TACCAAATGGGAATTTATGATTTCCAAGCATCTAAAATGCTAATTGTCCCTTTGGTTACA
TTAGTCATACTAAATATGATTTCCTTCACTTGGGGAGTTATTGGAAAAGTGATTCTAGAA
GGGAGATTGAGTGATTTGTTTGGTCAAGTGTTCCTCTCATTTTTCATCTTGGTGGTGAAT
TATCCTATAATTGAAGGGATGATATTGAGGAAAGACAAAGGAAGCATTCCACTCTTTGTG
ACTCTATTGTCTACTTTGCTTTCTTTTTGTCTTTTGTTCATTGGTTCTATTTTTGTAAGG
TAA