Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034835
CDS Infomation

pacid=37463100 polypeptide=PGSC0003DMP400023693 locus=PGSC0003DMG400013391 ID=PGSC0003DMT400034835.v4.03 annot-version=v4.03
Sequence

ATGCAGAAGCGGCAAAGCGGTGGTGTAGCTGGCGGTGGCTCAGCTACTCCGGCAGCTAAG
AGAGGACGTCCGTTAGGCAGCGTAAACAGTAACTCCGCCGCTGCCTCTGCTGCAGCGGCA
GCCGCATCCAGTGCTGCCGACTCAGTAGCTCCGCCAACGCTTCTCGGACCTTCACTTCAT
GTTCACTATGCATTTGCTGATCAGAATAATAAAAGGATTGTTCTGGCACTTCAAAGTGGA
TTGAAGAGTGAGCTGACGTGGGCATTAAACGCTCTCACTTTGCTATCATTTAAAGAGAAA
GATGAAATCCGCAAAGATGCAACCCCTCTTGCGAAAATTCCTGGGTTGCTTGATGCTCTA
CTTCAAGTTATAGATGACTGGCGTGACATAACGTTACCAAGGGTGCTTGTGAAGACACCA
CGTGTTCGACTATTGGGTGCGAATTCAGCTGTTACTGGATTTGGAAATGAATATGAGGCC
TTGAACTCGGATAATCCCTCACCTCATCCTAGTACTGGATCTGGATCTTCCAACAAAGAG
GCATCTGTTCTGAAGTGTGCTAACAAGCTTCGCCCTGGAGCCTGGAATTTTGATGAAGAC
GGCCTATTTAACTTGGATGAGGAGGGGCGTGCTGAGAAACAGCTGTGTGCTGTCGCTGCT
TCAAACATTATCCGTAACTTCTCTAACATGCCAGATAATGAAGTCATCATGGCGCAGCAC
AGGCATTGCTTTGAAACCATATTTCAATGTCTTGAAGATTATGTTACAGAGGATGAGGAA
CTTGTCACAAATGCCCTCGAGACTGTAGTGAATTTGGCTTTGTTGTTGAATCTTCGGATC
TTTAGCTCCTCAAAACCTTCTTTTATCAAAATGACGGAGAAACGTGCAGTCAAGGCTCTC
ATGGGAATGCTGGGATCTGCTGTGAAGACTTGGCACTCTGGCGCTGCTGAATTAATTGGT
CGTCTTATAATAAATCCTGACAATGAACCCTTCCTACTTCCTTTTGCTTCACAGATATAT
ACACGTTTGGTCGATATAATGAGCTCTCCACCTACTGATGCTCAAGCAGCTGCTGTAGGT
GCATTATATAACCTTGCAGAGATAAATATGGACTGTCGTTTGAAGCTGGCCAGTGAGCGA
TGGGCAATTGATCGACTGTTGAAAGTGATCAAGATGCCACATCCAGTACCAGAAATTTGC
AGGAAAGCAGCAACTATTTTGGAAAACCTTGTGTTGGAGCCGCAGAACAAGCCCCTCCTC
CTATCATATGAAAATGCCTTCGCAGAAATGCTCTTCGGGGATCCAAGGTACTCAGACATA
TTCGCAAGGATATTATATGAACTAACATCACGACCAAGCAACAAAGTTGCATCAGCTTGT
GGGATTTGGGGCATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400023693
PEP Infomation

pacid=37463100 transcript=PGSC0003DMT400034835 locus=PGSC0003DMG400013391 ID=PGSC0003DMT400034835.v4.03 annot-version=v4.03
Sequence

MQKRQSGGVAGGGSATPAAKRGRPLGSVNSNSAAASAAAAAASSAADSVAPPTLLGPSLH
VHYAFADQNNKRIVLALQSGLKSELTWALNALTLLSFKEKDEIRKDATPLAKIPGLLDAL
LQVIDDWRDITLPRVLVKTPRVRLLGANSAVTGFGNEYEALNSDNPSPHPSTGSGSSNKE
ASVLKCANKLRPGAWNFDEDGLFNLDEEGRAEKQLCAVAASNIIRNFSNMPDNEVIMAQH
RHCFETIFQCLEDYVTEDEELVTNALETVVNLALLLNLRIFSSSKPSFIKMTEKRAVKAL
MGMLGSAVKTWHSGAAELIGRLIINPDNEPFLLPFASQIYTRLVDIMSSPPTDAQAAAVG
ALYNLAEINMDCRLKLASERWAIDRLLKVIKMPHPVPEICRKAATILENLVLEPQNKPLL
LSYENAFAEMLFGDPRYSDIFARILYELTSRPSNKVASACGIWGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400034835
Transcript Infomation

pacid=37463100 locus=PGSC0003DMG400013391 ID=PGSC0003DMT400034835.v4.03 annot-version=v4.03
Sequence

ATGCAGAAGCGGCAAAGCGGTGGTGTAGCTGGCGGTGGCTCAGCTACTCCGGCAGCTAAG
AGAGGACGTCCGTTAGGCAGCGTAAACAGTAACTCCGCCGCTGCCTCTGCTGCAGCGGCA
GCCGCATCCAGTGCTGCCGACTCAGTAGCTCCGCCAACGCTTCTCGGACCTTCACTTCAT
GTTCACTATGCATTTGCTGATCAGAATAATAAAAGGATTGTTCTGGCACTTCAAAGTGGA
TTGAAGAGTGAGCTGACGTGGGCATTAAACGCTCTCACTTTGCTATCATTTAAAGAGAAA
GATGAAATCCGCAAAGATGCAACCCCTCTTGCGAAAATTCCTGGGTTGCTTGATGCTCTA
CTTCAAGTTATAGATGACTGGCGTGACATAACGTTACCAAGGGTGCTTGTGAAGACACCA
CGTGTTCGACTATTGGGTGCGAATTCAGCTGTTACTGGATTTGGAAATGAATATGAGGCC
TTGAACTCGGATAATCCCTCACCTCATCCTAGTACTGGATCTGGATCTTCCAACAAAGAG
GCATCTGTTCTGAAGTGTGCTAACAAGCTTCGCCCTGGAGCCTGGAATTTTGATGAAGAC
GGCCTATTTAACTTGGATGAGGAGGGGCGTGCTGAGAAACAGCTGTGTGCTGTCGCTGCT
TCAAACATTATCCGTAACTTCTCTAACATGCCAGATAATGAAGTCATCATGGCGCAGCAC
AGGCATTGCTTTGAAACCATATTTCAATGTCTTGAAGATTATGTTACAGAGGATGAGGAA
CTTGTCACAAATGCCCTCGAGACTGTAGTGAATTTGGCTTTGTTGTTGAATCTTCGGATC
TTTAGCTCCTCAAAACCTTCTTTTATCAAAATGACGGAGAAACGTGCAGTCAAGGCTCTC
ATGGGAATGCTGGGATCTGCTGTGAAGACTTGGCACTCTGGCGCTGCTGAATTAATTGGT
CGTCTTATAATAAATCCTGACAATGAACCCTTCCTACTTCCTTTTGCTTCACAGATATAT
ACACGTTTGGTCGATATAATGAGCTCTCCACCTACTGATGCTCAAGCAGCTGCTGTAGGT
GCATTATATAACCTTGCAGAGATAAATATGGACTGTCGTTTGAAGCTGGCCAGTGAGCGA
TGGGCAATTGATCGACTGTTGAAAGTGATCAAGATGCCACATCCAGTACCAGAAATTTGC
AGGAAAGCAGCAACTATTTTGGAAAACCTTGTGTTGGAGCCGCAGAACAAGCCCCTCCTC
CTATCATATGAAAATGCCTTCGCAGAAATGCTCTTCGGGGATCCAAGGTACTCAGACATA
TTCGCAAGGATATTATATGAACTAACATCACGACCAAGCAACAAAGTTGCATCAGCTTGT
GGGATTTGGGGCATGTAA