Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034707
CDS Infomation

pacid=37464618 polypeptide=PGSC0003DMP400023608 locus=PGSC0003DMG400013334 ID=PGSC0003DMT400034707.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGAGGAGAGCGTAATTCAATGGGAGTATTAGTGCCGACGGTGAACGCCGGT
GAAACTTCAGCTCCGGCCGGAGCGGAGACGGAGGCGGCGGTGGTTGGGACGGAGGTGGTG
GTGGTGACGGAGAGAGTTGCGGAGGAGGAAGAGGAAGAGGAAGAGGAGGTGGATAAGGAT
ATACTGTGTCCGATATGTATGCAAATTATAAAGGATGCGTTTCTAACGGCGTGTGGACAT
AGTTTTTGTTATATGTGCATTGTTACTCATTTGCAGAATAAAAGTGATTGTCCTTGTTGT
TCTCATTACTTGACGACGAATCATCTTTATCCTAATTTCCTTCTTAATAAGTTATTGATG
AAGAAATCTGCTCGCCAAATGGCCAAAAGTGCTACACCTGTGGAACAACTTCGCCAAGCA
ATACAGCAGGGATGCGAGGTGTCCGTTAAAGAGCTGGATAGTCTATTATCACTTCTTATG
GACAAGAAAAGAAAAATGGAACAAGAAGAAGCTGAAACAAATCTTCAGATTCTGCTCGAG
TTTCTCCAGTGTTTAAAGAAGCAAAAAGTTGACGAGCTTAATGAGATTCAAAATGATCTC
CAATACATTAAAGAAGACATAAATGCTGTGGAGAAGCGTAGAATAGAGTTATATAGGACA
AGAGGTAGATATTCTGCGAAAATGAGAACGCTAGTAGATGATTCATCTGCAATGACAGTC
AGGCCTCCATTGAGAGATAAGGGAAGTGGTGCAATTGTTTCTAGTCCTGTCAATTTACAA
GAACAAGGTCGTGCTGGCACTTCACAGACCAGGAATACTGATACAAGAGCTCCTCAGAAT
CCTCAAATTGTGCAACGGAAGGATGACAACCAAGGTGGATCAGATTCACAGGATCCTAAT
CAACCTGGAAAGTCATTAGCAAGGAAACGACGCGTTCATGCACAGTTCAATGAGCTTCAA
GATTGTTACCTACAAAAGAGGCGCTATTGGGCAAGACAGTCGCAGAAACAGGGAGAAAGG
GTAGCAAATATCATGAATAGAGTAGGTTATTCTGCGGGACTTGAGGATTTTCAATCTGTT
CTGTCTACCTTTACACGATACAGTAGTCTGCGGGTTGTTGCTGAACTCAGGCATTCTGAC
ATTTTCCACTCAGCCAATATTGTTTCAAGTATTGAATTTGACCGAGATGATGAATTGTTT
GCTACTGCTGGGGTATCACGAAGAATTAAGGTCTTCGAGTTTTCATCAGTGGTAAACGAA
CCAGCTGATGCGCAATGTCCAATTGTTGAAATGTCTACCCGATCTAAACTAAGTTGTTTG
AGTTGGAACAACTACACTAAAAACCACTTAGCAAGCAGTGACTATGAGGGCATAGTAACG
GTTTGGGATGTTACAACTCGTCAGAGTGTGATGGAGTACGAGGAGCATGAAAAACGAGCA
TGGAGTGTTGACTTTTGTCGTACTGAACCTTCTATGCTTGTATCTGGTAGTGATGATTGC
AAGGTTAAAGTTTGGTGCACGAATCAGGAAGCTAGTGTTCTTACCATTGACATGAAAGCT
AACATTTGCTCGGTGAAGTATAATCCTGGATCCAGTGCTCACATAGCTGTGGGTTCTGCA
GATCATCACGTTCACTATTACGACTTGAGAAATATTAGCCAGCCACTGTACATTTTCAGT
GGACACCGTAAAGCTGTTTCATATGTAAAATTTCTATCAAACTATGAGCTAGCTTCTGCA
TCAACCGATAGTACACTACGTTTGTGGGATGTCAATGAGAACGTTCCACTGCGTACGTTT
AAAGGACATACAAACGAGAAGAACTTTGTTGGTCTTACAGTAAACAGTGAATACCTTGCA
TGTGGAAGTGAGACAAATGAAGTCTTTGTCTATCACAAGGCAATTTCTAAACCAGCAGCT
TGGCACAGATTTGTTTCTGATGATCAGAATGATCCAGACGGGGACATGGGATCATTTTTC
ATCAGTGCTGTTTGTTGGAAACGGGACAGCCCAACGATTGTTACAGCAAACAGTCAAGGG
ACAATAAAAGCACTTGTTCTTGCTGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023608
PEP Infomation

pacid=37464618 transcript=PGSC0003DMT400034707 locus=PGSC0003DMG400013334 ID=PGSC0003DMT400034707.v4.03 annot-version=v4.03
Sequence

MGGGGERNSMGVLVPTVNAGETSAPAGAETEAAVVGTEVVVVTERVAEEEEEEEEEVDKD
ILCPICMQIIKDAFLTACGHSFCYMCIVTHLQNKSDCPCCSHYLTTNHLYPNFLLNKLLM
KKSARQMAKSATPVEQLRQAIQQGCEVSVKELDSLLSLLMDKKRKMEQEEAETNLQILLE
FLQCLKKQKVDELNEIQNDLQYIKEDINAVEKRRIELYRTRGRYSAKMRTLVDDSSAMTV
RPPLRDKGSGAIVSSPVNLQEQGRAGTSQTRNTDTRAPQNPQIVQRKDDNQGGSDSQDPN
QPGKSLARKRRVHAQFNELQDCYLQKRRYWARQSQKQGERVANIMNRVGYSAGLEDFQSV
LSTFTRYSSLRVVAELRHSDIFHSANIVSSIEFDRDDELFATAGVSRRIKVFEFSSVVNE
PADAQCPIVEMSTRSKLSCLSWNNYTKNHLASSDYEGIVTVWDVTTRQSVMEYEEHEKRA
WSVDFCRTEPSMLVSGSDDCKVKVWCTNQEASVLTIDMKANICSVKYNPGSSAHIAVGSA
DHHVHYYDLRNISQPLYIFSGHRKAVSYVKFLSNYELASASTDSTLRLWDVNENVPLRTF
KGHTNEKNFVGLTVNSEYLACGSETNEVFVYHKAISKPAAWHRFVSDDQNDPDGDMGSFF
ISAVCWKRDSPTIVTANSQGTIKALVLAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400034707
Transcript Infomation

pacid=37464618 locus=PGSC0003DMG400013334 ID=PGSC0003DMT400034707.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGAGGAGAGCGTAATTCAATGGGAGTATTAGTGCCGACGGTGAACGCCGGT
GAAACTTCAGCTCCGGCCGGAGCGGAGACGGAGGCGGCGGTGGTTGGGACGGAGGTGGTG
GTGGTGACGGAGAGAGTTGCGGAGGAGGAAGAGGAAGAGGAAGAGGAGGTGGATAAGGAT
ATACTGTGTCCGATATGTATGCAAATTATAAAGGATGCGTTTCTAACGGCGTGTGGACAT
AGTTTTTGTTATATGTGCATTGTTACTCATTTGCAGAATAAAAGTGATTGTCCTTGTTGT
TCTCATTACTTGACGACGAATCATCTTTATCCTAATTTCCTTCTTAATAAGTTATTGATG
AAGAAATCTGCTCGCCAAATGGCCAAAAGTGCTACACCTGTGGAACAACTTCGCCAAGCA
ATACAGCAGGGATGCGAGGTGTCCGTTAAAGAGCTGGATAGTCTATTATCACTTCTTATG
GACAAGAAAAGAAAAATGGAACAAGAAGAAGCTGAAACAAATCTTCAGATTCTGCTCGAG
TTTCTCCAGTGTTTAAAGAAGCAAAAAGTTGACGAGCTTAATGAGATTCAAAATGATCTC
CAATACATTAAAGAAGACATAAATGCTGTGGAGAAGCGTAGAATAGAGTTATATAGGACA
AGAGGTAGATATTCTGCGAAAATGAGAACGCTAGTAGATGATTCATCTGCAATGACAGTC
AGGCCTCCATTGAGAGATAAGGGAAGTGGTGCAATTGTTTCTAGTCCTGTCAATTTACAA
GAACAAGGTCGTGCTGGCACTTCACAGACCAGGAATACTGATACAAGAGCTCCTCAGAAT
CCTCAAATTGTGCAACGGAAGGATGACAACCAAGGTGGATCAGATTCACAGGATCCTAAT
CAACCTGGAAAGTCATTAGCAAGGAAACGACGCGTTCATGCACAGTTCAATGAGCTTCAA
GATTGTTACCTACAAAAGAGGCGCTATTGGGCAAGACAGTCGCAGAAACAGGGAGAAAGG
GTAGCAAATATCATGAATAGAGTAGGTTATTCTGCGGGACTTGAGGATTTTCAATCTGTT
CTGTCTACCTTTACACGATACAGTAGTCTGCGGGTTGTTGCTGAACTCAGGCATTCTGAC
ATTTTCCACTCAGCCAATATTGTTTCAAGTATTGAATTTGACCGAGATGATGAATTGTTT
GCTACTGCTGGGGTATCACGAAGAATTAAGGTCTTCGAGTTTTCATCAGTGGTAAACGAA
CCAGCTGATGCGCAATGTCCAATTGTTGAAATGTCTACCCGATCTAAACTAAGTTGTTTG
AGTTGGAACAACTACACTAAAAACCACTTAGCAAGCAGTGACTATGAGGGCATAGTAACG
GTTTGGGATGTTACAACTCGTCAGAGTGTGATGGAGTACGAGGAGCATGAAAAACGAGCA
TGGAGTGTTGACTTTTGTCGTACTGAACCTTCTATGCTTGTATCTGGTAGTGATGATTGC
AAGGTTAAAGTTTGGTGCACGAATCAGGAAGCTAGTGTTCTTACCATTGACATGAAAGCT
AACATTTGCTCGGTGAAGTATAATCCTGGATCCAGTGCTCACATAGCTGTGGGTTCTGCA
GATCATCACGTTCACTATTACGACTTGAGAAATATTAGCCAGCCACTGTACATTTTCAGT
GGACACCGTAAAGCTGTTTCATATGTAAAATTTCTATCAAACTATGAGCTAGCTTCTGCA
TCAACCGATAGTACACTACGTTTGTGGGATGTCAATGAGAACGTTCCACTGCGTACGTTT
AAAGGACATACAAACGAGAAGAACTTTGTTGGTCTTACAGTAAACAGTGAATACCTTGCA
TGTGGAAGTGAGACAAATGAAGTCTTTGTCTATCACAAGGCAATTTCTAAACCAGCAGCT
TGGCACAGATTTGTTTCTGATGATCAGAATGATCCAGACGGGGACATGGGATCATTTTTC
ATCAGTGCTGTTTGTTGGAAACGGGACAGCCCAACGATTGTTACAGCAAACAGTCAAGGG
ACAATAAAAGCACTTGTTCTTGCTGCTTGA