Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034697
CDS Infomation

pacid=37466629 polypeptide=PGSC0003DMP400023598 locus=PGSC0003DMG400013332 ID=PGSC0003DMT400034697.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCAAAAGATCAAAGTGGCTAACCCCATAGTTGAAATGGACGGAGATGAAATG
ACCCGTGTCATTTGGAAATTAATTAAGGATAAGCTCATCTTGCCTTTTCTGGAGTTGGAT
ATAAAATACTTCGATCTTGGCCTTCCTCACCGTGATGCCACAGATGATAAGGTTACAATT
GAAAGCGCTGAGGCTACTTTGAAGTATAATGTAGCTATTAAGTGTGCAACCATCACTCCA
GATGAGGCCCGTATGGAAGAGTTTAACTTGAAGCATATGTGGAAGAGCCCAAATGGGACA
ATTAGGAACATTCTGAATGGTACGGTGTTCAGGGAACCAATCCTCTGCAAAAACATTCCC
CGACTTGTTCCAGGTTGGTCAAAACCGATATGCATTGGCAGACATGCTTTTGGTGATCAA
TATCGAGCTACTGATACAGTGATTCAAGGAGCTGGAAAACTCAAATTAGTATTTGTACCA
GAAGGGACGGATGAAAAGACCGAGTTCGAGGTTTACAACTTCACTGGTGCTGGTGGAGTA
GCTCTATCCATGTACAACACGGATGAGTCTATTTGCTCTTTTGCTGAAGCTTCTATGAAC
ATGGCATACCAAAAGAAATGGCCACTCTATCTTAGCACAAAAAATACCATCCTTAAGAAA
TACGACGGAAGATTCAAGGACATATTCCAGGAAGTTTACGAGTCAAAATGGAAGTCAAAG
TTTGAGGAAGCTGGGATCTGGTACGAACATCGCCTCATCGATGATATGGTTGCTTATGCT
TTAAAAAGTGACGGTGGTTATGTATGGGCATGTAAAAACTATGATGGAGATGTACAGAGT
GATTTCTTAGCTCAAGGATTTGGATCGCTTGGATTGATGACATCGATCCTGATATGTCCG
GATGGAAAGACTGTGGAAGCAGAAGCAGCCCATGGAACTGTTACACGCCACTACAGGGTT
CATCAGAAAGGAGGTGAAACCAGCACAAATAGCATTGCCTCGATTTTTGCTTGGACTCGT
GGACTTGCACATAGGGCAAAGTTGGACAACAATGCTGCACTCTTAGATTTCACCAAGAAA
CTAGAAGCAGCTTGCATCGGTGCAGTGGAAAATGGGAAAATGACCAAAGATCTAGCACTT
ATTATCCACGGATCCAAGGTCGCTAGACGTCAATATGTAAACACTGAAGAGTTCATTGAT
GCTGTGGCTGATGAGCTGAAAGCTAGACTTCTGAAAGCAAAGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400023598
PEP Infomation

pacid=37466629 transcript=PGSC0003DMT400034697 locus=PGSC0003DMG400013332 ID=PGSC0003DMT400034697.v4.03 annot-version=v4.03
Sequence

MAFQKIKVANPIVEMDGDEMTRVIWKLIKDKLILPFLELDIKYFDLGLPHRDATDDKVTI
ESAEATLKYNVAIKCATITPDEARMEEFNLKHMWKSPNGTIRNILNGTVFREPILCKNIP
RLVPGWSKPICIGRHAFGDQYRATDTVIQGAGKLKLVFVPEGTDEKTEFEVYNFTGAGGV
ALSMYNTDESICSFAEASMNMAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYESKWKSK
FEEAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSILICP
DGKTVEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRAKLDNNAALLDFTKK
LEAACIGAVENGKMTKDLALIIHGSKVARRQYVNTEEFIDAVADELKARLLKAKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400034697
Transcript Infomation

pacid=37466629 locus=PGSC0003DMG400013332 ID=PGSC0003DMT400034697.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCAAAAGATCAAAGTGGCTAACCCCATAGTTGAAATGGACGGAGATGAAATG
ACCCGTGTCATTTGGAAATTAATTAAGGATAAGCTCATCTTGCCTTTTCTGGAGTTGGAT
ATAAAATACTTCGATCTTGGCCTTCCTCACCGTGATGCCACAGATGATAAGGTTACAATT
GAAAGCGCTGAGGCTACTTTGAAGTATAATGTAGCTATTAAGTGTGCAACCATCACTCCA
GATGAGGCCCGTATGGAAGAGTTTAACTTGAAGCATATGTGGAAGAGCCCAAATGGGACA
ATTAGGAACATTCTGAATGGTACGGTGTTCAGGGAACCAATCCTCTGCAAAAACATTCCC
CGACTTGTTCCAGGTTGGTCAAAACCGATATGCATTGGCAGACATGCTTTTGGTGATCAA
TATCGAGCTACTGATACAGTGATTCAAGGAGCTGGAAAACTCAAATTAGTATTTGTACCA
GAAGGGACGGATGAAAAGACCGAGTTCGAGGTTTACAACTTCACTGGTGCTGGTGGAGTA
GCTCTATCCATGTACAACACGGATGAGTCTATTTGCTCTTTTGCTGAAGCTTCTATGAAC
ATGGCATACCAAAAGAAATGGCCACTCTATCTTAGCACAAAAAATACCATCCTTAAGAAA
TACGACGGAAGATTCAAGGACATATTCCAGGAAGTTTACGAGTCAAAATGGAAGTCAAAG
TTTGAGGAAGCTGGGATCTGGTACGAACATCGCCTCATCGATGATATGGTTGCTTATGCT
TTAAAAAGTGACGGTGGTTATGTATGGGCATGTAAAAACTATGATGGAGATGTACAGAGT
GATTTCTTAGCTCAAGGATTTGGATCGCTTGGATTGATGACATCGATCCTGATATGTCCG
GATGGAAAGACTGTGGAAGCAGAAGCAGCCCATGGAACTGTTACACGCCACTACAGGGTT
CATCAGAAAGGAGGTGAAACCAGCACAAATAGCATTGCCTCGATTTTTGCTTGGACTCGT
GGACTTGCACATAGGGCAAAGTTGGACAACAATGCTGCACTCTTAGATTTCACCAAGAAA
CTAGAAGCAGCTTGCATCGGTGCAGTGGAAAATGGGAAAATGACCAAAGATCTAGCACTT
ATTATCCACGGATCCAAGGTCGCTAGACGTCAATATGTAAACACTGAAGAGTTCATTGAT
GCTGTGGCTGATGAGCTGAAAGCTAGACTTCTGAAAGCAAAGATATAA