Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034638
CDS Infomation

pacid=37464493 polypeptide=PGSC0003DMP400023547 locus=PGSC0003DMG400013309 ID=PGSC0003DMT400034638.v4.03 annot-version=v4.03
Sequence

ATGGGATTAGGGTTACTCGCTTCTCGAGCCCTACGATCTTCTAGAATCATCCGAAACTCT
ACCCGCACCATCGTCTCCACGCCGGAGCTCAAAAACGCCGATGCTGCCGCCGCCGCAGCA
GCTGCGGACGCACCATCAGATCTTCCTAAGAGAAACCCAGTTGGTGGTGCTCGAGTTCAT
TTACCTAATCCGGAGGATGTTATTGAGGTTTTCGTTGATGGGTACCCGGTCAAAATCCCT
AAGGGTATGACTGTGCTTCAGGCTTGTGAAATTGCCGGAGTTGACATTCCGAGGTTTTGT
TATCATAGCCGACTTTCTATTGCTGGAAATTGCAGAATGTGTCTTGTTGAGGTTGAGAAA
TCTCCTAAGCCTGTTGCTTCTTGTGCCATGCCTGCACTTCCAGGAATGAAGATCAAGACA
GATACACCAATTGCCAAAAAGGCTCGTGAAGGAGTCATGGAGTTCTTGCTTATGAATCAT
CCACTTGATTGCCCAATTTGTGATCAGGGAGGAGAATGTGATCTCCAGGATCAATCTATG
GCCTTTGGATCCGATCGTGGGCGTTTCACTGAAATGAAGAGATCTGTGGTTGACAAGAAT
TTGGGTCCATTGGTGAAGACTGTGATGACCCGGTGCATCCAGTGTACAAGGTGTGTCAGG
TTCGCATCAGAAGTAGCTGGAGTGGAGGACCTTGGAATGTTGGGTCGTGGTAGTGGAGAA
GAAATTGGAACTTATGTTGAAAAGCTTATGACAAGTGAGCTTTCAGGGAATGTGATTGAT
ATATGTCCAGTAGGAGCCCTTACATCAAAACCTTTTGCCTTCAAAGCCAGAAATTGGGAG
CTAAAGGGCACAGAAAGCATTGATGTGACTGATGCTGTTGGTTCTAACATCCGAATTGAT
AGTAGAGGTCCGGAGGTCATGCGTGTTGTACCACGATTAAATGAGGACATCAATGAAGAA
TGGATATCAGACAAAACACGATTCTTTTATGATGGTCTGAAGAGGCAAAGGCTCAATGAC
CCCATGATCCGTGGTGCTGATGGACGATTTCAGGCAGTGAGCTGGCGGGATGCCCTAGCT
ATTGTTGCTGAAGTCATGCATCAAATTAAGCCAGAGGAAATTATTGGTGTTGCAGGAAAA
CTGTCTGATGCAGAATCCATGATGGCACTGAAGGATCTTTTGAACAAAATGGGGTCAAAC
AACATCTTTTGTGAAGGAAATGGCATGCGTCCAAATGCTGACCTGCGTTCTGGATATATT
ATGAATACCAGCATTAGTGGCTTGGAGAAAGCAGATGCTTTCCTCTTGGTTGGAACCCAG
CCAAGGGTGGAAGCTGCTATGGTGAATGCCAGAATTCACAAAACAGTTAAAGCTACAAAT
GCTAAGGTAGGTTATGTTGGGCCTGCTGCTGATTTCAACTATGATCATGAACATCTTGGA
ACAGACCCTCAAACACTAGTTGAAATTGCCAAGGGAAGCCATCCATTTTCCTCAGCTCTC
AAAAATGCTAAGAACCCAGTGATCATCGTCGGTGCTGGAGTGTTTGATCGAGATGATAAG
GATGCTGTCTTTGCTGCTGTTGACACTATTGCAAAGAACAATAATGTCGTGAGACCTGAC
TGGAATGGACTAAATGTTTTGCTTCTGAATGCTGCCCAAGCTGCCGCTCTTGATCTTGGA
CTTGTGCCTGAATCTGATAAATGCATTGAGTCTGCAAAGTTTGTATATTTGATGGGTGCT
GATGATGTGAACTTGGACAAACTTCCAGATGATGCCTTTGTTGTTTACCAAGGTCACCAT
GGTGATCGCGGTGTGTATCGTGCCAATGTCATTTTGCCAGCATCTGCTTTCACAGAGAAA
GAAGGAATATATGAAAACACAGAAGGATGTGCTCAGATCACACTACCAGCAGTTCCCACT
GTTGGTGACGCCAGGGATGATTGGAAGATAGTAAGAGCATTGTCTGAAGTGGCAGGTGTC
GGATTACCCTACGATAGTCTAGGTGCAATCCGATCTCGAATTAAGACAGTAGCACCAAAT
CTCCTAGAAGTGGATGAGAGACAACCAGCCACATTCTCAACTTCTTTGAGACCTGAAGTC
ATCCAAAAAGTAAGTGCAACTCCATTCACACCTGCCGTGGCGAATTTCTACATGACTGAT
GCAATTACTAGGGCCTCAAAGATTATGGCTCAGTGTAGTGCCTTGCTAAAGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400023547
PEP Infomation

pacid=37464493 transcript=PGSC0003DMT400034638 locus=PGSC0003DMG400013309 ID=PGSC0003DMT400034638.v4.03 annot-version=v4.03
Sequence

MGLGLLASRALRSSRIIRNSTRTIVSTPELKNADAAAAAAAADAPSDLPKRNPVGGARVH
LPNPEDVIEVFVDGYPVKIPKGMTVLQACEIAGVDIPRFCYHSRLSIAGNCRMCLVEVEK
SPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSM
AFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVEDLGMLGRGSGE
EIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRID
SRGPEVMRVVPRLNEDINEEWISDKTRFFYDGLKRQRLNDPMIRGADGRFQAVSWRDALA
IVAEVMHQIKPEEIIGVAGKLSDAESMMALKDLLNKMGSNNIFCEGNGMRPNADLRSGYI
MNTSISGLEKADAFLLVGTQPRVEAAMVNARIHKTVKATNAKVGYVGPAADFNYDHEHLG
TDPQTLVEIAKGSHPFSSALKNAKNPVIIVGAGVFDRDDKDAVFAAVDTIAKNNNVVRPD
WNGLNVLLLNAAQAAALDLGLVPESDKCIESAKFVYLMGADDVNLDKLPDDAFVVYQGHH
GDRGVYRANVILPASAFTEKEGIYENTEGCAQITLPAVPTVGDARDDWKIVRALSEVAGV
GLPYDSLGAIRSRIKTVAPNLLEVDERQPATFSTSLRPEVIQKVSATPFTPAVANFYMTD
AITRASKIMAQCSALLKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400034638
Transcript Infomation

pacid=37464493 locus=PGSC0003DMG400013309 ID=PGSC0003DMT400034638.v4.03 annot-version=v4.03
Sequence

ATGGGATTAGGGTTACTCGCTTCTCGAGCCCTACGATCTTCTAGAATCATCCGAAACTCT
ACCCGCACCATCGTCTCCACGCCGGAGCTCAAAAACGCCGATGCTGCCGCCGCCGCAGCA
GCTGCGGACGCACCATCAGATCTTCCTAAGAGAAACCCAGTTGGTGGTGCTCGAGTTCAT
TTACCTAATCCGGAGGATGTTATTGAGGTTTTCGTTGATGGGTACCCGGTCAAAATCCCT
AAGGGTATGACTGTGCTTCAGGCTTGTGAAATTGCCGGAGTTGACATTCCGAGGTTTTGT
TATCATAGCCGACTTTCTATTGCTGGAAATTGCAGAATGTGTCTTGTTGAGGTTGAGAAA
TCTCCTAAGCCTGTTGCTTCTTGTGCCATGCCTGCACTTCCAGGAATGAAGATCAAGACA
GATACACCAATTGCCAAAAAGGCTCGTGAAGGAGTCATGGAGTTCTTGCTTATGAATCAT
CCACTTGATTGCCCAATTTGTGATCAGGGAGGAGAATGTGATCTCCAGGATCAATCTATG
GCCTTTGGATCCGATCGTGGGCGTTTCACTGAAATGAAGAGATCTGTGGTTGACAAGAAT
TTGGGTCCATTGGTGAAGACTGTGATGACCCGGTGCATCCAGTGTACAAGGTGTGTCAGG
TTCGCATCAGAAGTAGCTGGAGTGGAGGACCTTGGAATGTTGGGTCGTGGTAGTGGAGAA
GAAATTGGAACTTATGTTGAAAAGCTTATGACAAGTGAGCTTTCAGGGAATGTGATTGAT
ATATGTCCAGTAGGAGCCCTTACATCAAAACCTTTTGCCTTCAAAGCCAGAAATTGGGAG
CTAAAGGGCACAGAAAGCATTGATGTGACTGATGCTGTTGGTTCTAACATCCGAATTGAT
AGTAGAGGTCCGGAGGTCATGCGTGTTGTACCACGATTAAATGAGGACATCAATGAAGAA
TGGATATCAGACAAAACACGATTCTTTTATGATGGTCTGAAGAGGCAAAGGCTCAATGAC
CCCATGATCCGTGGTGCTGATGGACGATTTCAGGCAGTGAGCTGGCGGGATGCCCTAGCT
ATTGTTGCTGAAGTCATGCATCAAATTAAGCCAGAGGAAATTATTGGTGTTGCAGGAAAA
CTGTCTGATGCAGAATCCATGATGGCACTGAAGGATCTTTTGAACAAAATGGGGTCAAAC
AACATCTTTTGTGAAGGAAATGGCATGCGTCCAAATGCTGACCTGCGTTCTGGATATATT
ATGAATACCAGCATTAGTGGCTTGGAGAAAGCAGATGCTTTCCTCTTGGTTGGAACCCAG
CCAAGGGTGGAAGCTGCTATGGTGAATGCCAGAATTCACAAAACAGTTAAAGCTACAAAT
GCTAAGGTAGGTTATGTTGGGCCTGCTGCTGATTTCAACTATGATCATGAACATCTTGGA
ACAGACCCTCAAACACTAGTTGAAATTGCCAAGGGAAGCCATCCATTTTCCTCAGCTCTC
AAAAATGCTAAGAACCCAGTGATCATCGTCGGTGCTGGAGTGTTTGATCGAGATGATAAG
GATGCTGTCTTTGCTGCTGTTGACACTATTGCAAAGAACAATAATGTCGTGAGACCTGAC
TGGAATGGACTAAATGTTTTGCTTCTGAATGCTGCCCAAGCTGCCGCTCTTGATCTTGGA
CTTGTGCCTGAATCTGATAAATGCATTGAGTCTGCAAAGTTTGTATATTTGATGGGTGCT
GATGATGTGAACTTGGACAAACTTCCAGATGATGCCTTTGTTGTTTACCAAGGTCACCAT
GGTGATCGCGGTGTGTATCGTGCCAATGTCATTTTGCCAGCATCTGCTTTCACAGAGAAA
GAAGGAATATATGAAAACACAGAAGGATGTGCTCAGATCACACTACCAGCAGTTCCCACT
GTTGGTGACGCCAGGGATGATTGGAAGATAGTAAGAGCATTGTCTGAAGTGGCAGGTGTC
GGATTACCCTACGATAGTCTAGGTGCAATCCGATCTCGAATTAAGACAGTAGCACCAAAT
CTCCTAGAAGTGGATGAGAGACAACCAGCCACATTCTCAACTTCTTTGAGACCTGAAGTC
ATCCAAAAAGTAAGTGCAACTCCATTCACACCTGCCGTGGCGAATTTCTACATGACTGAT
GCAATTACTAGGGCCTCAAAGATTATGGCTCAGTGTAGTGCCTTGCTAAAGAAATGA