Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034533
CDS Infomation

pacid=37466953 polypeptide=PGSC0003DMP400023475 locus=PGSC0003DMG400013273 ID=PGSC0003DMT400034533.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAAGTCGTTTGTTGAAGTTGAACCGGAATCTCACTTCCCTCTCGAGAACCTG
CCGTACGGTGTATTCAAGCCTGAACCGGGTTCACTACCTCGACCGGGCGTCGCTATCGGA
GAATATGTTTTGGACTTATCGGAGATTGCTTTCGCCGGTTTATTTGACGGTCCTTTGCTC
AGTAACTCCGATTGTTTCAATCAGCCTAACTTGAACAAGTTTGTTGGATTGGGACGACCT
GCATGGAAGGAAGCTCGGGTGACATTGCAAAAGCTGTTATCAGCCACAGAACCAACATTG
CGTGACAATGCTGCTTTAAGACAGATAGCTCTTCTGCCTATGGAAAAGGTGCAAATGCTT
CTACCTGTTGCGATTGGAGACTATACTGACTTCTTTGCATCAATGCACCATGCCAAGAAT
TGTGGGACTCTTTTTCGTGGCCCTGAAAATCCTATCAACCTTAATTGGTTCCATCTTCCT
ATTGCTTACCATGGGCGAGCATCATCAATTGTCGTTTCTGGAACAGATATCATTAGACCC
AGAGGACAAGGTCATCCAACTGGTAATTCTGCGCCATATTTTGGACCTTCGAGAAAATTG
GATTTTGAGTTGGAAATGGCTGCTATAGTTGGCCCTGGTAATGAACTAGGAACAACAATC
GACGTCAATGATGCTGCAAATCATATATTTGGACTTGTCTTGATGAATGATTGGAGTGCA
AGAGATATCCAGGCATGGGAGTATGTGCCTCTTGGTCCTTTTCTTGGAAAGAGTTTTGGC
ACAACCATATCTCCTTGGATTGTGACTTTAGATGCCTTGGAACCCTTTGCTTGTGAGGGC
CCAAAGCAGAACCCTTCTCCATTGACATATCTTGTAGAGAAGACATCAAGAAACTATGAC
ATTTCTTTGGAGGTCCTCATTAAGCCTTCTGGACAAGCTGATTCATGTGTTGTGACAAGA
AGCAACTTTAACCACTTATATTGGACAATTACTCAACAGCTGGCTCACCATACTATCAAT
GGCTGCAACCTAAGGCCTGGGGACATGTTTGGAACTGGAACTATCAGTGGACCAGAACCA
GAATCTTATGGATGTTTGCTTGAATTAACATGGAATGGACAAAAGCCTTTGTCTTTAGAT
GGAACTACCCGTACATTCTTAGAAGATGGAGATGAAGTAGCTTTCTTTGGTTATTGTCAG
GGCAATGGATACAAAGTTGGTTTCGGAAGATGCTCAGGGAAGATTGTCCCGTCTCCACAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400023475
PEP Infomation

pacid=37466953 transcript=PGSC0003DMT400034533 locus=PGSC0003DMG400013273 ID=PGSC0003DMT400034533.v4.03 annot-version=v4.03
Sequence

MALKSFVEVEPESHFPLENLPYGVFKPEPGSLPRPGVAIGEYVLDLSEIAFAGLFDGPLL
SNSDCFNQPNLNKFVGLGRPAWKEARVTLQKLLSATEPTLRDNAALRQIALLPMEKVQML
LPVAIGDYTDFFASMHHAKNCGTLFRGPENPINLNWFHLPIAYHGRASSIVVSGTDIIRP
RGQGHPTGNSAPYFGPSRKLDFELEMAAIVGPGNELGTTIDVNDAANHIFGLVLMNDWSA
RDIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACEGPKQNPSPLTYLVEKTSRNYD
ISLEVLIKPSGQADSCVVTRSNFNHLYWTITQQLAHHTINGCNLRPGDMFGTGTISGPEP
ESYGCLLELTWNGQKPLSLDGTTRTFLEDGDEVAFFGYCQGNGYKVGFGRCSGKIVPSPQ
*

Transcript Sequence

Transcript ID

PGSC0003DMT400034533
Transcript Infomation

pacid=37466953 locus=PGSC0003DMG400013273 ID=PGSC0003DMT400034533.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAAGTCGTTTGTTGAAGTTGAACCGGAATCTCACTTCCCTCTCGAGAACCTG
CCGTACGGTGTATTCAAGCCTGAACCGGGTTCACTACCTCGACCGGGCGTCGCTATCGGA
GAATATGTTTTGGACTTATCGGAGATTGCTTTCGCCGGTTTATTTGACGGTCCTTTGCTC
AGTAACTCCGATTGTTTCAATCAGCCTAACTTGAACAAGTTTGTTGGATTGGGACGACCT
GCATGGAAGGAAGCTCGGGTGACATTGCAAAAGCTGTTATCAGCCACAGAACCAACATTG
CGTGACAATGCTGCTTTAAGACAGATAGCTCTTCTGCCTATGGAAAAGGTGCAAATGCTT
CTACCTGTTGCGATTGGAGACTATACTGACTTCTTTGCATCAATGCACCATGCCAAGAAT
TGTGGGACTCTTTTTCGTGGCCCTGAAAATCCTATCAACCTTAATTGGTTCCATCTTCCT
ATTGCTTACCATGGGCGAGCATCATCAATTGTCGTTTCTGGAACAGATATCATTAGACCC
AGAGGACAAGGTCATCCAACTGGTAATTCTGCGCCATATTTTGGACCTTCGAGAAAATTG
GATTTTGAGTTGGAAATGGCTGCTATAGTTGGCCCTGGTAATGAACTAGGAACAACAATC
GACGTCAATGATGCTGCAAATCATATATTTGGACTTGTCTTGATGAATGATTGGAGTGCA
AGAGATATCCAGGCATGGGAGTATGTGCCTCTTGGTCCTTTTCTTGGAAAGAGTTTTGGC
ACAACCATATCTCCTTGGATTGTGACTTTAGATGCCTTGGAACCCTTTGCTTGTGAGGGC
CCAAAGCAGAACCCTTCTCCATTGACATATCTTGTAGAGAAGACATCAAGAAACTATGAC
ATTTCTTTGGAGGTCCTCATTAAGCCTTCTGGACAAGCTGATTCATGTGTTGTGACAAGA
AGCAACTTTAACCACTTATATTGGACAATTACTCAACAGCTGGCTCACCATACTATCAAT
GGCTGCAACCTAAGGCCTGGGGACATGTTTGGAACTGGAACTATCAGTGGACCAGAACCA
GAATCTTATGGATGTTTGCTTGAATTAACATGGAATGGACAAAAGCCTTTGTCTTTAGAT
GGAACTACCCGTACATTCTTAGAAGATGGAGATGAAGTAGCTTTCTTTGGTTATTGTCAG
GGCAATGGATACAAAGTTGGTTTCGGAAGATGCTCAGGGAAGATTGTCCCGTCTCCACAA
TGA