Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034453
CDS Infomation

pacid=37464170 polypeptide=PGSC0003DMP400023422 locus=PGSC0003DMG401013245 ID=PGSC0003DMT400034453.v4.03 annot-version=v4.03
Sequence

ATGCCTCCTAAGGCAAGAAAGCTTCGTCGAAGTCTAGTTCCCGATGCCCTTAGCTACCTC
CCTGATAATATAATTGATGTCATTCTGATGTGTTTGCCTTCTAAAGATGCTGTGAGAACA
AGCATCTTATCAAAGAAATGGAGGTATCACTGGTGTCGACTTACAAAGTTGGAGCTTGAT
GAATCTCTTTGGATAACAAAGAAGGATTTACTGAACCCTACAATAAAATTTAGAAAGATT
ATGTACCAGTTTTTGAGCCTTCATGAAGGACCCATCACTAGGTTTACCCTTGATGTTGTT
CATCTAGCAAGCTGTCCTGAGATTGACAACTTCATATATTTCCTCTCGAGGAATGACATT
CAACATCTTGCTCTTCACCTTCCACTTAGAAAGGAATACAAATTGCCTTCCTTACTTTTC
GCATGTTCGCAGCTGAGGCATCTAAGTCTTTGTTATTGCTCAATACAACATCCATCAGCC
TTTCAAGGATTTGATAAGTTAATTAGCTTGAATTTATGTGAAGTCAATATTTCTTCTGAG
TTACTGGAAAGTTTAATATCTCATTGCCCGTTGCTTGAGGAGTTGGAGCTGGATATCGCA
AACAAGTCAGACACAATTGAAATTAATGCCCCCATGTTGAGGTCGTTCGATCTCTCAGGC
AATATAAGTTCTGTCTGCCTAAAGAATGTCCCTCGTCTGGTAAAAGTATTGCTCTATGGT
GACTATATTAAAGCAGAGGATCTTGATTTTGCAAAGCTTTTCGAGTGTTGTCCTGCTCTC
GAGCACCTCCTCTTTTTCTCCCTTGATTCCGGGTTCTCTGCTGGAGCAGGATATGAAGCA
CCAACAAGACTTCCGTTTAATCTTAACAGCGTCAAACGATTTACCCTGCCTGACATTATG
CTGGTGGAATCATATAAGCTCTCATATGCTCTTTGCTTGATAAGAAGTTTCCCATATTTA
GAATATCTCGAAATACAGGTTCATGAATATGGATATGACTATGAAGATGAAGATGATGAG
GATGAACCTATTCCAGAACCCCTTGAGCTCAAACATTTATCGGATGTGACATTTAATCAC
CTCAAGGAAGTTAAGCTAGGCTGCTTAACAGGAACAACGTCTGAGTTGCTGCTTATCAAA
TTTTTGTTAGCCGAGTCCCCAGTGTTGGAGAGAATGCTAATCGATCGACAGTATCTTGAT
CATGAACAGCTCGACACAAGATTACAAATATTCGCAGATATATCAAATTTTTCGCGGTCA
TCACCTAAAGCAGAAGTTGTCTACATAGATTTAGGCGGATCTTTGGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400023422
PEP Infomation

pacid=37464170 transcript=PGSC0003DMT400034453 locus=PGSC0003DMG401013245 ID=PGSC0003DMT400034453.v4.03 annot-version=v4.03
Sequence

MPPKARKLRRSLVPDALSYLPDNIIDVILMCLPSKDAVRTSILSKKWRYHWCRLTKLELD
ESLWITKKDLLNPTIKFRKIMYQFLSLHEGPITRFTLDVVHLASCPEIDNFIYFLSRNDI
QHLALHLPLRKEYKLPSLLFACSQLRHLSLCYCSIQHPSAFQGFDKLISLNLCEVNISSE
LLESLISHCPLLEELELDIANKSDTIEINAPMLRSFDLSGNISSVCLKNVPRLVKVLLYG
DYIKAEDLDFAKLFECCPALEHLLFFSLDSGFSAGAGYEAPTRLPFNLNSVKRFTLPDIM
LVESYKLSYALCLIRSFPYLEYLEIQVHEYGYDYEDEDDEDEPIPEPLELKHLSDVTFNH
LKEVKLGCLTGTTSELLLIKFLLAESPVLERMLIDRQYLDHEQLDTRLQIFADISNFSRS
SPKAEVVYIDLGGSLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400034453
Transcript Infomation

pacid=37464170 locus=PGSC0003DMG401013245 ID=PGSC0003DMT400034453.v4.03 annot-version=v4.03
Sequence

ATGCCTCCTAAGGCAAGAAAGCTTCGTCGAAGTCTAGTTCCCGATGCCCTTAGCTACCTC
CCTGATAATATAATTGATGTCATTCTGATGTGTTTGCCTTCTAAAGATGCTGTGAGAACA
AGCATCTTATCAAAGAAATGGAGGTATCACTGGTGTCGACTTACAAAGTTGGAGCTTGAT
GAATCTCTTTGGATAACAAAGAAGGATTTACTGAACCCTACAATAAAATTTAGAAAGATT
ATGTACCAGTTTTTGAGCCTTCATGAAGGACCCATCACTAGGTTTACCCTTGATGTTGTT
CATCTAGCAAGCTGTCCTGAGATTGACAACTTCATATATTTCCTCTCGAGGAATGACATT
CAACATCTTGCTCTTCACCTTCCACTTAGAAAGGAATACAAATTGCCTTCCTTACTTTTC
GCATGTTCGCAGCTGAGGCATCTAAGTCTTTGTTATTGCTCAATACAACATCCATCAGCC
TTTCAAGGATTTGATAAGTTAATTAGCTTGAATTTATGTGAAGTCAATATTTCTTCTGAG
TTACTGGAAAGTTTAATATCTCATTGCCCGTTGCTTGAGGAGTTGGAGCTGGATATCGCA
AACAAGTCAGACACAATTGAAATTAATGCCCCCATGTTGAGGTCGTTCGATCTCTCAGGC
AATATAAGTTCTGTCTGCCTAAAGAATGTCCCTCGTCTGGTAAAAGTATTGCTCTATGGT
GACTATATTAAAGCAGAGGATCTTGATTTTGCAAAGCTTTTCGAGTGTTGTCCTGCTCTC
GAGCACCTCCTCTTTTTCTCCCTTGATTCCGGGTTCTCTGCTGGAGCAGGATATGAAGCA
CCAACAAGACTTCCGTTTAATCTTAACAGCGTCAAACGATTTACCCTGCCTGACATTATG
CTGGTGGAATCATATAAGCTCTCATATGCTCTTTGCTTGATAAGAAGTTTCCCATATTTA
GAATATCTCGAAATACAGGTTCATGAATATGGATATGACTATGAAGATGAAGATGATGAG
GATGAACCTATTCCAGAACCCCTTGAGCTCAAACATTTATCGGATGTGACATTTAATCAC
CTCAAGGAAGTTAAGCTAGGCTGCTTAACAGGAACAACGTCTGAGTTGCTGCTTATCAAA
TTTTTGTTAGCCGAGTCCCCAGTGTTGGAGAGAATGCTAATCGATCGACAGTATCTTGAT
CATGAACAGCTCGACACAAGATTACAAATATTCGCAGATATATCAAATTTTTCGCGGTCA
TCACCTAAAGCAGAAGTTGTCTACATAGATTTAGGCGGATCTTTGGCTTAG