Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034446
CDS Infomation

pacid=37465569 polypeptide=PGSC0003DMP400023417 locus=PGSC0003DMG400013243 ID=PGSC0003DMT400034446.v4.03 annot-version=v4.03
Sequence

ATGACGAGAGGTGAGGAAGTACTGGAGATAGACATTAATGGAGGTCGAGCAGAGTATGAA
ATAGAAGATATGAGAGATAAGATGGAATCTTCTAGAGGAAGTCGATTTAAACTCAGCGAA
AACGATCTCGTCGGAGTTGATTTGCTTAGTCGCCGGAGAAGAAAAATTAGCCGGGAAAGT
TTACTCAACGGACTTAAGGATCTCTCACAAGGCTTCGTTATTCATCCTGATAACAGGTGG
TACAGGATGTGGGAAAATTTCATCCTTATATGGTCAATATATTCATCATTTTTCACACCA
ATGGAGTTTGCTTTCTTCAATGGATTACCAAGGAAACTATTTCTCTTAGACATTTGTGGT
CAAATTGTTTTTCTTGTTGATATAGTCATCCAATTCTCTGTTGCATATAGAGATAGTCAG
ACTTACAAGATGGTGTATAAACGAACCCCTATCGCTCTTCGGTACTTAAAGTCTCATTTC
ATTATGGATTTTCTAGGTTGCATGCCCTGGGATATAATCTATAAGGCTGTTGGCAGCAAA
GAGGAAGTGAGATACCTCTTATGGATTCGGTTGAGCAGGGCGCGTAGAATTACTTACTTT
TTCCAGAAGATGGAGAAAGATATTCGGATCAATTACCTCTTCACGAGGATTGTAAAACTT
ATCACTGTAGAACTATACTGCACGCATACAGCAGCCTGCATTTTTTACTTTTTGGCGACT
ACGCTGTCTGAACAACAAGAAGGTTACACATGGATTGGTAGTTTGAAATTGGGAGATTAC
AGTTATTCAAACTTTAGAGATATTGATCTTTGGACGCGATACACTACTTCAATGTATTTT
GCCATTGTTACTATGGCAACTGTTGGTTATGGAGATATACATGCTGTCAATTTGAGGGAA
ATGATATTTGTCATGATTTATGTCTCTTTTGATATGATTCTTAGTGCTTATTTGATCGGT
AACATGACAGCTCTAATTGTGAAAGGATCAAAAACTGAACGATACAGGGATAAGATGACG
GATCTATTGAAATATATGAACAGAAATAGACTCGGAAGGGACATTCGTAATCAAATTAAA
GGTCACTTGCGATTACAATATGAAAGTGCTTACACTGATGCTGCTGTTCTCCAAGATATT
CCAATCTCTATCCGAGCCAAGATTTCCCAGAATTTATATCAGTCTTACATAGAAAATGTT
CCTCTTTTTAAGGGCTGTTCCTCGGAATTCATAAGTCAAGTCGTAACTCGAGTTCATGAG
GAATTTTTCCTCCCTGGAGAAGTGATAATGGAGCAAGGCAATGTAGTAGACCAGCTATAT
TTTGTCTGTCATGGTGTTCTGGAGGAAGTTGGTATAGCGAAGAACGGATCAGAAGAGACA
GTGTCACTTCTTGAGCCTAACAGCTCATTCGGAGACATTTCCATCGTTTGCAACATTCCT
CAACCATATACAGTTCGTGTTTGTGAACTATGCAGGCTCTTACGTATCGATAAGCAGTCA
TTTGCCAATATTCTGGAGATTTATTTTCATGATGGAAGAAGAATCTTGAGTAATTTACTA
CAGGGAAAAGAATCTAATCTCCGCGTGAAGCAACTAGAGTCGGATATTGCACTCCATATA
GGGAAGCATGAGGCAGAGCTTGCTTTGAAAGTGAATAGTGCAGCTTATCATGGTGATTTG
CATCAGCTGAAGAGTCTAATTCGAGCTGGAGCTGATCCAAACAAGAAAGATTATGACGGA
CGATCACCTCTGCATCTTGCAGCATCGAGAGGCTATGAAGACATAACTCTTTTCCTCATC
CAAGAAGGCGTTGATATTAATGCTCCAGATAAATTTGGCAACACACCTCTGCTTGAAGCA
ATCAAGAGTGGACATGATCGCGTTGCTTCATTACTTGTTAAGGAAGGGGCCTTATTGAAC
ATTGAAAATGCTGGTAGCTTCCTATGTATGGTTATAGCAAAGGGGGATTCAGATTTATTA
CGAAGGCTATTGTCAAACGGTGTTGATCCAAACAACAAAGACTATGATCAACGAACGCCA
CTTCACGTTGCTGCTTCTCAAGGTCAATACTCAATGGCAAAGTTACTTTTGGGAGCTGGT
GCTTCTGTTTTCTCAAAGGATAGATGGGGAAATACTCCAGTTGATGAAGCTAGAGTAAGT
GGAAACAAGCAAATGATCAGTCTTTTAGAAGAAGCAAAATCTGCTCAATTATCTGAATTC
CCTGATGTTCCACATGAGATCTCAGATAAATTGCGTCCGAGGAAATGCACTGTGTTTCCT
TTCCATCCATGGGAGTCTAAAGATGTGAGAAAACATGGTGTTGTCCTGTGGATACCTCAG
ACAATCGAGGAGCTCGTTATAACAGCATCAGAACAACTCGGTTTCCCATCGGGCTCTTGT
ATATTATCAGAAGATGCTGGCAAGATTCTTGATGTAGATATGATTGTTGATGGTCAAAAA
TTGTACTTGATCAATGAATCAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023417
PEP Infomation

pacid=37465569 transcript=PGSC0003DMT400034446 locus=PGSC0003DMG400013243 ID=PGSC0003DMT400034446.v4.03 annot-version=v4.03
Sequence

MTRGEEVLEIDINGGRAEYEIEDMRDKMESSRGSRFKLSENDLVGVDLLSRRRRKISRES
LLNGLKDLSQGFVIHPDNRWYRMWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICG
QIVFLVDIVIQFSVAYRDSQTYKMVYKRTPIALRYLKSHFIMDFLGCMPWDIIYKAVGSK
EEVRYLLWIRLSRARRITYFFQKMEKDIRINYLFTRIVKLITVELYCTHTAACIFYFLAT
TLSEQQEGYTWIGSLKLGDYSYSNFRDIDLWTRYTTSMYFAIVTMATVGYGDIHAVNLRE
MIFVMIYVSFDMILSAYLIGNMTALIVKGSKTERYRDKMTDLLKYMNRNRLGRDIRNQIK
GHLRLQYESAYTDAAVLQDIPISIRAKISQNLYQSYIENVPLFKGCSSEFISQVVTRVHE
EFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIAKNGSEETVSLLEPNSSFGDISIVCNIP
QPYTVRVCELCRLLRIDKQSFANILEIYFHDGRRILSNLLQGKESNLRVKQLESDIALHI
GKHEAELALKVNSAAYHGDLHQLKSLIRAGADPNKKDYDGRSPLHLAASRGYEDITLFLI
QEGVDINAPDKFGNTPLLEAIKSGHDRVASLLVKEGALLNIENAGSFLCMVIAKGDSDLL
RRLLSNGVDPNNKDYDQRTPLHVAASQGQYSMAKLLLGAGASVFSKDRWGNTPVDEARVS
GNKQMISLLEEAKSAQLSEFPDVPHEISDKLRPRKCTVFPFHPWESKDVRKHGVVLWIPQ
TIEELVITASEQLGFPSGSCILSEDAGKILDVDMIVDGQKLYLINEST*

Transcript Sequence

Transcript ID

PGSC0003DMT400034446
Transcript Infomation

pacid=37465569 locus=PGSC0003DMG400013243 ID=PGSC0003DMT400034446.v4.03 annot-version=v4.03
Sequence

ATGACGAGAGGTGAGGAAGTACTGGAGATAGACATTAATGGAGGTCGAGCAGAGTATGAA
ATAGAAGATATGAGAGATAAGATGGAATCTTCTAGAGGAAGTCGATTTAAACTCAGCGAA
AACGATCTCGTCGGAGTTGATTTGCTTAGTCGCCGGAGAAGAAAAATTAGCCGGGAAAGT
TTACTCAACGGACTTAAGGATCTCTCACAAGGCTTCGTTATTCATCCTGATAACAGGTGG
TACAGGATGTGGGAAAATTTCATCCTTATATGGTCAATATATTCATCATTTTTCACACCA
ATGGAGTTTGCTTTCTTCAATGGATTACCAAGGAAACTATTTCTCTTAGACATTTGTGGT
CAAATTGTTTTTCTTGTTGATATAGTCATCCAATTCTCTGTTGCATATAGAGATAGTCAG
ACTTACAAGATGGTGTATAAACGAACCCCTATCGCTCTTCGGTACTTAAAGTCTCATTTC
ATTATGGATTTTCTAGGTTGCATGCCCTGGGATATAATCTATAAGGCTGTTGGCAGCAAA
GAGGAAGTGAGATACCTCTTATGGATTCGGTTGAGCAGGGCGCGTAGAATTACTTACTTT
TTCCAGAAGATGGAGAAAGATATTCGGATCAATTACCTCTTCACGAGGATTGTAAAACTT
ATCACTGTAGAACTATACTGCACGCATACAGCAGCCTGCATTTTTTACTTTTTGGCGACT
ACGCTGTCTGAACAACAAGAAGGTTACACATGGATTGGTAGTTTGAAATTGGGAGATTAC
AGTTATTCAAACTTTAGAGATATTGATCTTTGGACGCGATACACTACTTCAATGTATTTT
GCCATTGTTACTATGGCAACTGTTGGTTATGGAGATATACATGCTGTCAATTTGAGGGAA
ATGATATTTGTCATGATTTATGTCTCTTTTGATATGATTCTTAGTGCTTATTTGATCGGT
AACATGACAGCTCTAATTGTGAAAGGATCAAAAACTGAACGATACAGGGATAAGATGACG
GATCTATTGAAATATATGAACAGAAATAGACTCGGAAGGGACATTCGTAATCAAATTAAA
GGTCACTTGCGATTACAATATGAAAGTGCTTACACTGATGCTGCTGTTCTCCAAGATATT
CCAATCTCTATCCGAGCCAAGATTTCCCAGAATTTATATCAGTCTTACATAGAAAATGTT
CCTCTTTTTAAGGGCTGTTCCTCGGAATTCATAAGTCAAGTCGTAACTCGAGTTCATGAG
GAATTTTTCCTCCCTGGAGAAGTGATAATGGAGCAAGGCAATGTAGTAGACCAGCTATAT
TTTGTCTGTCATGGTGTTCTGGAGGAAGTTGGTATAGCGAAGAACGGATCAGAAGAGACA
GTGTCACTTCTTGAGCCTAACAGCTCATTCGGAGACATTTCCATCGTTTGCAACATTCCT
CAACCATATACAGTTCGTGTTTGTGAACTATGCAGGCTCTTACGTATCGATAAGCAGTCA
TTTGCCAATATTCTGGAGATTTATTTTCATGATGGAAGAAGAATCTTGAGTAATTTACTA
CAGGGAAAAGAATCTAATCTCCGCGTGAAGCAACTAGAGTCGGATATTGCACTCCATATA
GGGAAGCATGAGGCAGAGCTTGCTTTGAAAGTGAATAGTGCAGCTTATCATGGTGATTTG
CATCAGCTGAAGAGTCTAATTCGAGCTGGAGCTGATCCAAACAAGAAAGATTATGACGGA
CGATCACCTCTGCATCTTGCAGCATCGAGAGGCTATGAAGACATAACTCTTTTCCTCATC
CAAGAAGGCGTTGATATTAATGCTCCAGATAAATTTGGCAACACACCTCTGCTTGAAGCA
ATCAAGAGTGGACATGATCGCGTTGCTTCATTACTTGTTAAGGAAGGGGCCTTATTGAAC
ATTGAAAATGCTGGTAGCTTCCTATGTATGGTTATAGCAAAGGGGGATTCAGATTTATTA
CGAAGGCTATTGTCAAACGGTGTTGATCCAAACAACAAAGACTATGATCAACGAACGCCA
CTTCACGTTGCTGCTTCTCAAGGTCAATACTCAATGGCAAAGTTACTTTTGGGAGCTGGT
GCTTCTGTTTTCTCAAAGGATAGATGGGGAAATACTCCAGTTGATGAAGCTAGAGTAAGT
GGAAACAAGCAAATGATCAGTCTTTTAGAAGAAGCAAAATCTGCTCAATTATCTGAATTC
CCTGATGTTCCACATGAGATCTCAGATAAATTGCGTCCGAGGAAATGCACTGTGTTTCCT
TTCCATCCATGGGAGTCTAAAGATGTGAGAAAACATGGTGTTGTCCTGTGGATACCTCAG
ACAATCGAGGAGCTCGTTATAACAGCATCAGAACAACTCGGTTTCCCATCGGGCTCTTGT
ATATTATCAGAAGATGCTGGCAAGATTCTTGATGTAGATATGATTGTTGATGGTCAAAAA
TTGTACTTGATCAATGAATCAACTTGA