Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034348
CDS Infomation

pacid=37461655 polypeptide=PGSC0003DMP400023357 locus=PGSC0003DMG400013207 ID=PGSC0003DMT400034348.v4.03 annot-version=v4.03
Sequence

ATGTTCCATCGTCACAAGTTCCTTGGCAGTGACACAGATTTTTTGTTGAACCTTATTGAC
ACACCTGGGCATGTGGATTTTAGCTATGAAGTATCCAGATCTTTGGCAGCTTGTCAAGGT
GCCCTTTTGGTTGTTGATGCAGCCCAAGGTGTGCAGGCACAGACTGTTGCTAATTTTTAC
CTCGCGTTTGAATCAAACCTGGCCATAATTCCTGTCATAAATAAAATTGATCAACCCACT
GCTGATCCAGATCGGGTAAAAGCACAGCTCAAATCTATGTTTGACCTTAATCCAAGTGAT
GTACTATTGACATCAGCAAAAACTGGTCTAGGTCTAGAGCAGGTTCTTCCTGCTGCAATA
GAGAGAATTCCTCCACCCCCTGGAAAAAGCACTTCACCTTTGCGAATGCTTTTGCTGGAT
TCATATTATGATGAGTACAAAGGAGTTATCTGCCATGTGTCTATTGTTGATGGTGCTCTG
CACAAGGGTGACAAGATTTGCTCTGCTGCGACTGGCCAAAGTTATGAAGTTTCCGATGTT
GGTATCATGCACCCAGAACTTGTGGCGACAGGAATCCTTTTAACAGGTCAAGTTGGATAT
ATAGTCAGCGGAATGCGTTCAACAAAAGAGGCCCGTGTTGGAGATACTCTACATCATACA
CGAACAGTTATACAGCCCCTTCCAGGTTTCAAGCCAGCAAAACATATGGTCTTTTCTGGC
CTATATCCAGCTGATGGATCTGATTTTGAGGCACTTAACCATGCCATAGAGAGACTGACG
TGTAATGATGCCAGCGTCTCTGTAACTAAAGAAAGCAGCACAGCTCTAGGTCTGGGTTTC
AGATGTGGTTTCTTGGGCTTACTTCACATGGATGTTTTTCATCAGCGACTTGAGCAGGAA
CATGGAGCACATGTCATTTCCACTGTTCCTACAGTGCCATATATTTTTGAGTACTCAGAT
GGAAGCAAATTACAGGTTCAGAATCCAGCTGCTTTGCCTTCAAACCCCAAAAATAGACTC
ATTGCCTGCTGGGAACCTACTGTGTTAGCTACTATTATAATCCCTAGTGAGTATGTGGGG
TCTGTTATCACTTTATGCGCTGAGCGTCGCGGGGAGCAATTGGAGTACTCATTCATTGAT
AGCCAGCGAGCTTTCATGAAGTATCGCATGCCTCTGAGGGAAATTGTTGTGGACTTCTAC
AATGAATTGAAAAGTATAACATCAGGATATGCTTCGTTTGATTATGAGGATTCAGAATAT
CAGGCTTCGGATTTGGTGAAGCTGGATATTCTCCTTAATGGCCAACCAGTTGATGCCATG
GCAACCATTGTCCACAAATCAAAAGCTCCACGTGTTGGCCGTGAACTTGTGGAGAAGCTT
AAAACATTTATAGACAGGCAGATGTTTGAAATTATCATACAAGCTGCTATTGGATCTAAG
GTCATAGCCCGGGAGACGCTTTCTGCTATGAGAAAAAATGTTCTGGCAAAGTGTTATGGT
GGTGATGTTACAAGAAAGAGGAAGTTGTTGGAGAAACAGAAAGAAGGGAAGAAGCGAATG
AAGCGAGTGGGATCCGTCGATATACCCCAAGAGGCATTCCACGAGTTACTCAAGGTCTCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400023357
PEP Infomation

pacid=37461655 transcript=PGSC0003DMT400034348 locus=PGSC0003DMG400013207 ID=PGSC0003DMT400034348.v4.03 annot-version=v4.03
Sequence

MFHRHKFLGSDTDFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFY
LAFESNLAIIPVINKIDQPTADPDRVKAQLKSMFDLNPSDVLLTSAKTGLGLEQVLPAAI
ERIPPPPGKSTSPLRMLLLDSYYDEYKGVICHVSIVDGALHKGDKICSAATGQSYEVSDV
GIMHPELVATGILLTGQVGYIVSGMRSTKEARVGDTLHHTRTVIQPLPGFKPAKHMVFSG
LYPADGSDFEALNHAIERLTCNDASVSVTKESSTALGLGFRCGFLGLLHMDVFHQRLEQE
HGAHVISTVPTVPYIFEYSDGSKLQVQNPAALPSNPKNRLIACWEPTVLATIIIPSEYVG
SVITLCAERRGEQLEYSFIDSQRAFMKYRMPLREIVVDFYNELKSITSGYASFDYEDSEY
QASDLVKLDILLNGQPVDAMATIVHKSKAPRVGRELVEKLKTFIDRQMFEIIIQAAIGSK
VIARETLSAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400034348
Transcript Infomation

pacid=37461655 locus=PGSC0003DMG400013207 ID=PGSC0003DMT400034348.v4.03 annot-version=v4.03
Sequence

ATGTTCCATCGTCACAAGTTCCTTGGCAGTGACACAGATTTTTTGTTGAACCTTATTGAC
ACACCTGGGCATGTGGATTTTAGCTATGAAGTATCCAGATCTTTGGCAGCTTGTCAAGGT
GCCCTTTTGGTTGTTGATGCAGCCCAAGGTGTGCAGGCACAGACTGTTGCTAATTTTTAC
CTCGCGTTTGAATCAAACCTGGCCATAATTCCTGTCATAAATAAAATTGATCAACCCACT
GCTGATCCAGATCGGGTAAAAGCACAGCTCAAATCTATGTTTGACCTTAATCCAAGTGAT
GTACTATTGACATCAGCAAAAACTGGTCTAGGTCTAGAGCAGGTTCTTCCTGCTGCAATA
GAGAGAATTCCTCCACCCCCTGGAAAAAGCACTTCACCTTTGCGAATGCTTTTGCTGGAT
TCATATTATGATGAGTACAAAGGAGTTATCTGCCATGTGTCTATTGTTGATGGTGCTCTG
CACAAGGGTGACAAGATTTGCTCTGCTGCGACTGGCCAAAGTTATGAAGTTTCCGATGTT
GGTATCATGCACCCAGAACTTGTGGCGACAGGAATCCTTTTAACAGGTCAAGTTGGATAT
ATAGTCAGCGGAATGCGTTCAACAAAAGAGGCCCGTGTTGGAGATACTCTACATCATACA
CGAACAGTTATACAGCCCCTTCCAGGTTTCAAGCCAGCAAAACATATGGTCTTTTCTGGC
CTATATCCAGCTGATGGATCTGATTTTGAGGCACTTAACCATGCCATAGAGAGACTGACG
TGTAATGATGCCAGCGTCTCTGTAACTAAAGAAAGCAGCACAGCTCTAGGTCTGGGTTTC
AGATGTGGTTTCTTGGGCTTACTTCACATGGATGTTTTTCATCAGCGACTTGAGCAGGAA
CATGGAGCACATGTCATTTCCACTGTTCCTACAGTGCCATATATTTTTGAGTACTCAGAT
GGAAGCAAATTACAGGTTCAGAATCCAGCTGCTTTGCCTTCAAACCCCAAAAATAGACTC
ATTGCCTGCTGGGAACCTACTGTGTTAGCTACTATTATAATCCCTAGTGAGTATGTGGGG
TCTGTTATCACTTTATGCGCTGAGCGTCGCGGGGAGCAATTGGAGTACTCATTCATTGAT
AGCCAGCGAGCTTTCATGAAGTATCGCATGCCTCTGAGGGAAATTGTTGTGGACTTCTAC
AATGAATTGAAAAGTATAACATCAGGATATGCTTCGTTTGATTATGAGGATTCAGAATAT
CAGGCTTCGGATTTGGTGAAGCTGGATATTCTCCTTAATGGCCAACCAGTTGATGCCATG
GCAACCATTGTCCACAAATCAAAAGCTCCACGTGTTGGCCGTGAACTTGTGGAGAAGCTT
AAAACATTTATAGACAGGCAGATGTTTGAAATTATCATACAAGCTGCTATTGGATCTAAG
GTCATAGCCCGGGAGACGCTTTCTGCTATGAGAAAAAATGTTCTGGCAAAGTGTTATGGT
GGTGATGTTACAAGAAAGAGGAAGTTGTTGGAGAAACAGAAAGAAGGGAAGAAGCGAATG
AAGCGAGTGGGATCCGTCGATATACCCCAAGAGGCATTCCACGAGTTACTCAAGGTCTCA
TGA