Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034299
CDS Infomation

pacid=37464259 polypeptide=PGSC0003DMP400023328 locus=PGSC0003DMG400013187 ID=PGSC0003DMT400034299.v4.03 annot-version=v4.03
Sequence

ATGGGGAGGCTAGGAGTTGGGTTAGCGGTGGGTTGTGCTATGGCGGCGTGTATTGTAGCA
GCAGCTATGGTGGGTAAGAGGGTAAGCAAGAGGAGGAAATGGTTGAAAATGGTGAAAGTT
TTGGAAGAACTGGAAGAGTCATGTGATACTACTGTTTTTAGATTAAAGCAAGTAGTTGAT
GCTATGGCTGTTGAAATGCATGCTGGACTTGCTTCTGAAGGAGGGAGTAAACTCAAGATG
TTGCTTACATATGTTGATAAACTCCCAAATGGGAGTGAGGAGGGAACATATTATGCTCTG
GACCTTGGTGGTACAAACTTTAGAGTTTTGAGAGTCCACTTAGGAGACCAAAGGTCTGCT
ATTCTTGGACAAGATATTGAACGCCAACCCATTCCGCAACACCTAATGACAAGCACAAGC
GAGGATCTCTTTGATTTCATTGCTTCATCGCTAAAGGACTTCATTGAAAAGGAGGGTAAT
GACTTAGAACAGACTTCACCTAGGAGGAGAGAACTTGGTTTCACATTTTCATTTCCTGTG
AAGCAATCTTCCGTCTCATCTGGCATTTTGATGAAATGGACAAAAGGATTTGCAATTGAA
GATACGATTGGGAGAGATGTTTCTGAATGTCTGCAACTAGCACTCTCCAGGAAAGGTCTA
GATGTGCGGGTTGCAGCACTGATAAATGATACTGTGGGAACTCTAGCTCTTGGACATTAT
AATGATGAAGACACAGTTGCTGCGGTTATAATTGGGACTGGCACTAATGCATGCTATTTG
GAGCGGGCAGATGCAATTATTAAGTGTCAAGGTCTTCTAACAACATCTGGAAGCATGGTG
GTCAATATGGAATGGGGAAACTTTTGGTCATCTCATTTACCAAGAACCTCATATGATATC
GACTTGGATGTTGCTAGCCCAAACCCAAATGATCAGGGCTTTGAGAAAATGATATCAGGA
ATGTATTTGGGAGACATTGTCCGGAGAGTGCTCCTTAGAATGTCTAAGCAATCAGATGAT
TTTGGACCTTCATCTTCAAAATTAGCAATTCCTTTCGTCTTGAGAACACCGTTGATGGCT
GCTATGCATGAGGATGATTCACCTGACTTGAGTGAAGTAGCCAAAATCCTAGAAGAAGTT
CTGGAGTTACCCGATGTGCCAGTGAAAGTCCGGAAGCTTGTAGTGAAGGTATGTGATGTC
ATTACTCGAAGGGCTGCTAGACTAGCAGCTGCTGGTATCGTAGGAATCTTGAAGAAGATT
GGTCGAGATGGGAGTGGGGGCATAGCCAGTGGAAAGTTCAGGAGTAATAGGCCAAGTCGG
ATGAGAAGAACAGTTGTGGCTATCGAGGGTGGTTTATACACAAGTTACACCACATTCAGA
GAATACCTGAATGAAGCAATGGCGGAAATTTTAGGGGAAGAAGTTTCCCCTTACGTCGTT
CTTAGGGTCATGGAAGATGGATCAGGCACTGGAGCAGCTCTTGTTGCTGCTGCAAATTCA
CCCCCTGAGGCAGCGGCGGATACAGTACAGCTGCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023328
PEP Infomation

pacid=37464259 transcript=PGSC0003DMT400034299 locus=PGSC0003DMG400013187 ID=PGSC0003DMT400034299.v4.03 annot-version=v4.03
Sequence

MGRLGVGLAVGCAMAACIVAAAMVGKRVSKRRKWLKMVKVLEELEESCDTTVFRLKQVVD
AMAVEMHAGLASEGGSKLKMLLTYVDKLPNGSEEGTYYALDLGGTNFRVLRVHLGDQRSA
ILGQDIERQPIPQHLMTSTSEDLFDFIASSLKDFIEKEGNDLEQTSPRRRELGFTFSFPV
KQSSVSSGILMKWTKGFAIEDTIGRDVSECLQLALSRKGLDVRVAALINDTVGTLALGHY
NDEDTVAAVIIGTGTNACYLERADAIIKCQGLLTTSGSMVVNMEWGNFWSSHLPRTSYDI
DLDVASPNPNDQGFEKMISGMYLGDIVRRVLLRMSKQSDDFGPSSSKLAIPFVLRTPLMA
AMHEDDSPDLSEVAKILEEVLELPDVPVKVRKLVVKVCDVITRRAARLAAAGIVGILKKI
GRDGSGGIASGKFRSNRPSRMRRTVVAIEGGLYTSYTTFREYLNEAMAEILGEEVSPYVV
LRVMEDGSGTGAALVAAANSPPEAAADTVQLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400034299
Transcript Infomation

pacid=37464259 locus=PGSC0003DMG400013187 ID=PGSC0003DMT400034299.v4.03 annot-version=v4.03
Sequence

ATGGGGAGGCTAGGAGTTGGGTTAGCGGTGGGTTGTGCTATGGCGGCGTGTATTGTAGCA
GCAGCTATGGTGGGTAAGAGGGTAAGCAAGAGGAGGAAATGGTTGAAAATGGTGAAAGTT
TTGGAAGAACTGGAAGAGTCATGTGATACTACTGTTTTTAGATTAAAGCAAGTAGTTGAT
GCTATGGCTGTTGAAATGCATGCTGGACTTGCTTCTGAAGGAGGGAGTAAACTCAAGATG
TTGCTTACATATGTTGATAAACTCCCAAATGGGAGTGAGGAGGGAACATATTATGCTCTG
GACCTTGGTGGTACAAACTTTAGAGTTTTGAGAGTCCACTTAGGAGACCAAAGGTCTGCT
ATTCTTGGACAAGATATTGAACGCCAACCCATTCCGCAACACCTAATGACAAGCACAAGC
GAGGATCTCTTTGATTTCATTGCTTCATCGCTAAAGGACTTCATTGAAAAGGAGGGTAAT
GACTTAGAACAGACTTCACCTAGGAGGAGAGAACTTGGTTTCACATTTTCATTTCCTGTG
AAGCAATCTTCCGTCTCATCTGGCATTTTGATGAAATGGACAAAAGGATTTGCAATTGAA
GATACGATTGGGAGAGATGTTTCTGAATGTCTGCAACTAGCACTCTCCAGGAAAGGTCTA
GATGTGCGGGTTGCAGCACTGATAAATGATACTGTGGGAACTCTAGCTCTTGGACATTAT
AATGATGAAGACACAGTTGCTGCGGTTATAATTGGGACTGGCACTAATGCATGCTATTTG
GAGCGGGCAGATGCAATTATTAAGTGTCAAGGTCTTCTAACAACATCTGGAAGCATGGTG
GTCAATATGGAATGGGGAAACTTTTGGTCATCTCATTTACCAAGAACCTCATATGATATC
GACTTGGATGTTGCTAGCCCAAACCCAAATGATCAGGGCTTTGAGAAAATGATATCAGGA
ATGTATTTGGGAGACATTGTCCGGAGAGTGCTCCTTAGAATGTCTAAGCAATCAGATGAT
TTTGGACCTTCATCTTCAAAATTAGCAATTCCTTTCGTCTTGAGAACACCGTTGATGGCT
GCTATGCATGAGGATGATTCACCTGACTTGAGTGAAGTAGCCAAAATCCTAGAAGAAGTT
CTGGAGTTACCCGATGTGCCAGTGAAAGTCCGGAAGCTTGTAGTGAAGGTATGTGATGTC
ATTACTCGAAGGGCTGCTAGACTAGCAGCTGCTGGTATCGTAGGAATCTTGAAGAAGATT
GGTCGAGATGGGAGTGGGGGCATAGCCAGTGGAAAGTTCAGGAGTAATAGGCCAAGTCGG
ATGAGAAGAACAGTTGTGGCTATCGAGGGTGGTTTATACACAAGTTACACCACATTCAGA
GAATACCTGAATGAAGCAATGGCGGAAATTTTAGGGGAAGAAGTTTCCCCTTACGTCGTT
CTTAGGGTCATGGAAGATGGATCAGGCACTGGAGCAGCTCTTGTTGCTGCTGCAAATTCA
CCCCCTGAGGCAGCGGCGGATACAGTACAGCTGCAGTGA