Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034298
CDS Infomation

pacid=37465184 polypeptide=PGSC0003DMP400023327 locus=PGSC0003DMG400013186 ID=PGSC0003DMT400034298.v4.03 annot-version=v4.03
Sequence

ATGAATGATCAAAAGGTGTTGATCTTTGGGTCATTTACAGAAGATGAGATCAAAACTTTG
CAAAGCCAGCCGACAACTGATGTAGGGATCACATTTGGTTCTTTGGATTCTGCAACTTTA
AAATCTGTGGGCATTTTTGACACAAAATTGACAGAGTTTGATCATTCTAAGAAACTTCAG
CCATCAGAGCTTGTTCATAGAGCGAATGTCACTGAGGCTCATAGCAATACAGGGAAAACC
AAAAAGTCGATTGGCAATACTGTAAAAGAATATGGTAGTTCTAGTTTCACAAATCCTGCT
TACAATGGGAGTGTGTTACATCCAACAGTGAATACCGGAAGTGCTTATGATTCGTCCGAA
AAGTCAAGCTTGTTGCAGTCTGCAGCTGATAATGTGTCTGAATTGTCTAGCAGTGTGCAC
GATGTTCATTTAACTAATCAGCTTAAAAACTATAACTTGGTGAATGGTAGACACACATCT
CTGAATGCATCATCAAATGGGTCTGCTGTGGTTTTCAGAAGTTTTTTACCTCGAGGGTTG
GTCAACTTGGGGAACTTATGCTTTCTTAATGCAACTCTTCAGGCTCTTCTCTCTTGCTCT
CCTTTTGTTCATCTCCTGCAAGAACTAAAAACACGTGATATAACAGAGGCTGGGTATCCA
ACTTTACATGCCTTTGTTCAGTTCATCTCTGACTTCGGCATATACATTGATCCGAGCATG
AAGAAAAAGGAAACAATTGTTCCAGAAATTGGGCTGCCTTTTCGACCTTTAATGTTTGAA
TCTGTCCTAAAGAACTTCACTCCAGATGTTGCAAATAGCTTGACAGGCAGACCTAGGCAG
GAAGATGTTCAGGAGTTCCTCAGTTTTCTGATGCATCAGATGCATGATGAATTGCTAAAA
TTAGAGGGTCAAGTACCAAATGGTATTGGGAGAAACTCCTCTCTGGTTTCATCACCAGAT
GATGAGGAAGAGGATGATGATTGGGAGACTGTTGGCCCAAGGAATAAGACTGCAGTTACT
AGAACACAGAGCTTTGTTCCATCAAAATTAAGTGAAATTTTTGGAGGTCAATTGAAGAGT
GTAGTGAAGGCTAAAGGTAACAAAGCCTCAGCAACAGTACAACCATTTCTTCTGCTCCAC
CTTAACATTTATCCAGAGCCTATTTGCTCCATAGAAGATGCACTTCGGATGTTTTCTGCA
CCAGAGGCACTTGAAGGATATCGAACTTCTGCAGCTGGAAAGGCTGAGGTAGTCAGTGCC
AGCAAGTCTGTTAAGATTCTGGAGCTTTCTGATATAATGGTGTTGCATTTGATGCGCTTT
AGCTACGAAAGTGAAGGGAGTACCAAGTTGCACAAACCCGTGCACTTTCCTTTGGAGCTT
GTGTTTGGTCGTGAATTGCTTGACTCTCCTACTGAGGGTCGGAAGTATGAACTAGTTGCA
ACGATCACTCATCATGGAAGGGACCCTTCAAAGGGTCATTATACTGCTGATGCCCGCCAT
CCAAGTGGCAAGTGGCTGCGTTACGATGATGTGTCCGTCACAGCCATCCCCACAAGCAAG
GTGCTGCATGATCAAGCTTACGTTCTCTTCTACAAACAGTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400023327
PEP Infomation

pacid=37465184 transcript=PGSC0003DMT400034298 locus=PGSC0003DMG400013186 ID=PGSC0003DMT400034298.v4.03 annot-version=v4.03
Sequence

MNDQKVLIFGSFTEDEIKTLQSQPTTDVGITFGSLDSATLKSVGIFDTKLTEFDHSKKLQ
PSELVHRANVTEAHSNTGKTKKSIGNTVKEYGSSSFTNPAYNGSVLHPTVNTGSAYDSSE
KSSLLQSAADNVSELSSSVHDVHLTNQLKNYNLVNGRHTSLNASSNGSAVVFRSFLPRGL
VNLGNLCFLNATLQALLSCSPFVHLLQELKTRDITEAGYPTLHAFVQFISDFGIYIDPSM
KKKETIVPEIGLPFRPLMFESVLKNFTPDVANSLTGRPRQEDVQEFLSFLMHQMHDELLK
LEGQVPNGIGRNSSLVSSPDDEEEDDDWETVGPRNKTAVTRTQSFVPSKLSEIFGGQLKS
VVKAKGNKASATVQPFLLLHLNIYPEPICSIEDALRMFSAPEALEGYRTSAAGKAEVVSA
SKSVKILELSDIMVLHLMRFSYESEGSTKLHKPVHFPLELVFGRELLDSPTEGRKYELVA
TITHHGRDPSKGHYTADARHPSGKWLRYDDVSVTAIPTSKVLHDQAYVLFYKQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400034298
Transcript Infomation

pacid=37465184 locus=PGSC0003DMG400013186 ID=PGSC0003DMT400034298.v4.03 annot-version=v4.03
Sequence

ATGAATGATCAAAAGGTGTTGATCTTTGGGTCATTTACAGAAGATGAGATCAAAACTTTG
CAAAGCCAGCCGACAACTGATGTAGGGATCACATTTGGTTCTTTGGATTCTGCAACTTTA
AAATCTGTGGGCATTTTTGACACAAAATTGACAGAGTTTGATCATTCTAAGAAACTTCAG
CCATCAGAGCTTGTTCATAGAGCGAATGTCACTGAGGCTCATAGCAATACAGGGAAAACC
AAAAAGTCGATTGGCAATACTGTAAAAGAATATGGTAGTTCTAGTTTCACAAATCCTGCT
TACAATGGGAGTGTGTTACATCCAACAGTGAATACCGGAAGTGCTTATGATTCGTCCGAA
AAGTCAAGCTTGTTGCAGTCTGCAGCTGATAATGTGTCTGAATTGTCTAGCAGTGTGCAC
GATGTTCATTTAACTAATCAGCTTAAAAACTATAACTTGGTGAATGGTAGACACACATCT
CTGAATGCATCATCAAATGGGTCTGCTGTGGTTTTCAGAAGTTTTTTACCTCGAGGGTTG
GTCAACTTGGGGAACTTATGCTTTCTTAATGCAACTCTTCAGGCTCTTCTCTCTTGCTCT
CCTTTTGTTCATCTCCTGCAAGAACTAAAAACACGTGATATAACAGAGGCTGGGTATCCA
ACTTTACATGCCTTTGTTCAGTTCATCTCTGACTTCGGCATATACATTGATCCGAGCATG
AAGAAAAAGGAAACAATTGTTCCAGAAATTGGGCTGCCTTTTCGACCTTTAATGTTTGAA
TCTGTCCTAAAGAACTTCACTCCAGATGTTGCAAATAGCTTGACAGGCAGACCTAGGCAG
GAAGATGTTCAGGAGTTCCTCAGTTTTCTGATGCATCAGATGCATGATGAATTGCTAAAA
TTAGAGGGTCAAGTACCAAATGGTATTGGGAGAAACTCCTCTCTGGTTTCATCACCAGAT
GATGAGGAAGAGGATGATGATTGGGAGACTGTTGGCCCAAGGAATAAGACTGCAGTTACT
AGAACACAGAGCTTTGTTCCATCAAAATTAAGTGAAATTTTTGGAGGTCAATTGAAGAGT
GTAGTGAAGGCTAAAGGTAACAAAGCCTCAGCAACAGTACAACCATTTCTTCTGCTCCAC
CTTAACATTTATCCAGAGCCTATTTGCTCCATAGAAGATGCACTTCGGATGTTTTCTGCA
CCAGAGGCACTTGAAGGATATCGAACTTCTGCAGCTGGAAAGGCTGAGGTAGTCAGTGCC
AGCAAGTCTGTTAAGATTCTGGAGCTTTCTGATATAATGGTGTTGCATTTGATGCGCTTT
AGCTACGAAAGTGAAGGGAGTACCAAGTTGCACAAACCCGTGCACTTTCCTTTGGAGCTT
GTGTTTGGTCGTGAATTGCTTGACTCTCCTACTGAGGGTCGGAAGTATGAACTAGTTGCA
ACGATCACTCATCATGGAAGGGACCCTTCAAAGGGTCATTATACTGCTGATGCCCGCCAT
CCAAGTGGCAAGTGGCTGCGTTACGATGATGTGTCCGTCACAGCCATCCCCACAAGCAAG
GTGCTGCATGATCAAGCTTACGTTCTCTTCTACAAACAGTTGTAA