Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034198
CDS Infomation

pacid=37478304 polypeptide=PGSC0003DMP400023269 locus=PGSC0003DMG400013147 ID=PGSC0003DMT400034198.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTGTTTGTGGTAAACTTTCTCGAAAGGTCAAAGATCGTCGGGATGGTCAAAAG
AAGAGAGAGTTAGATAAAGGGGCATCAGCTGTGAGTTCAAAGAGAGAAAAGAGTTTTAGG
GTGAAAGAGAAATCGGAGAATGGTGATATAAGTGTTGGTTCATTCGACAGGAAGCCTAAT
GGATCTAAAAAGGTTGGGGACAATCACTGCGAGAAGCTTGAAGTTGTCCCAAAAGCAATG
GAAGGAGAGTTGATTGCTGCAGGATGGCCTTCTTCGCTTGCTGCAGTAGCCAGTGAAGCT
ATTAATGGTTGGATTCCACGCAAGGCTGATACTTTTGAGAAATTAGACAAGATTGGTCAA
GGGACTTATAGTAGTGTATACAAGGCTCGTGACCTGGTTAATGATAAAGTTGTTGCGCTT
AAAAGAGTAAGGTTCGAAAAAATGGATCCTGAAAGTATCAGATTTATGGCTAGGGAAATT
GTTATTCTGCGAAGGCTTGATCATCCAAATATCATCAAATTGGAAGGCTTGATCGTATCA
AGAACATCTTGTAGTCTGTACCTTGTATTTGAGTACATGGAACATGATCTCACTGGACTG
GCAGCTCTTCCCGGTATTAAATTTACAGAGCCACAGGTTAAATGTTACATGCGGCAGCTT
TTAAGTGGACTTGACCATTGCCACAATCGGGGTGTTCTGCATCGGGACATCAAGGGTTCT
AATCTTCTCATTGACAATCATGGCACTTTAAAGATTGCAGATTTTGGGTTGGCAAACTTT
TTCGATAACCAGCAAATTGTTCCATTAACAAGCCGTGTTGTGACTCTTTGGTATCGACCA
CCAGAGCTCTTACTTGGAGCAAGTCATTATGGAACTGCAGTAGACTTGTGGAGTACTGGC
TGCATTCTCGGAGAATTATATGTTGCCAAGCCCATAATGCCCGGTAGGACAGAGGTGGAA
CAACTACATAAGATCTTTAAGCTTTGTGGTTCACCAACTGAGGATTATTGGAAGAAAACA
AAACTATCCTATTCAGCAGTATTTAAACCTATACAGCCTTACAAGCGGTGTATTGGCGAA
AGATTTAAGGAGGTTCCTCCATCTGCCGTGGGGTTACTGGAAACATTACTTTCTATAGAT
CCTGCACTTAGAGGAACAGCAGTTGGGGCTCTTGAGAGTGAGTTCTTCACCACGAAGCCA
TTTGCTTGTGATCCTTCGAGTTTGCCAACATACCCTCCCAGCAAGGAAATTGATGCAAAA
ATGCGGGAAGAGGAAGCCAGAAGAGGAGGGACTACAAATGGATCAAAAGAACGTCAAGCA
GTTCCAGCACGTGATGCTAATGCCAAGCTAGCTAGCTCAATGCAGAGGAGGCCGAGCAGT
TCCAATCCTAAGAGCCAAAGTGACCGGTTCAATCCCTCGAAGGAAGCTGCTGCTCGTTTT
CCAAATGATCCTCCTAAACCATCACAAGCAGTGAAAGAAACCACGAAAGATCACATGGAG
AATCTTTCAGATAGATTTTCAGCCAAAGATAACCTTGACGATCTTTCAGAGACATTTTCT
CATTCAGTCCCTATGGCTCTAGGGGTATTTGGGAAGAAATATGATGATATCTCCATTGGT
CCCAACAGAGCTGACTTGTCAGACTTAGTAGCATCCAGGTCCGTTGTGTCCGGAGACAAT
CGAGATAGATGTGTTCAGCTACAATCAGCCCATCAAGTAGAAAGGACAGCACGGCTTCTA
GACGAACATTCAAGGAAGCAGGATCAGAAGTATTTCACGCAGAACTTTCCCAGTTCTCAT
CAATTTGAAAGTGGAAGGACTTGTACGAAGGAGGCAAATCTGGTAAGTTCTCATAAACAC
GTAAATCTAAGAGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023269
PEP Infomation

pacid=37478304 transcript=PGSC0003DMT400034198 locus=PGSC0003DMG400013147 ID=PGSC0003DMT400034198.v4.03 annot-version=v4.03
Sequence

MGCVCGKLSRKVKDRRDGQKKRELDKGASAVSSKREKSFRVKEKSENGDISVGSFDRKPN
GSKKVGDNHCEKLEVVPKAMEGELIAAGWPSSLAAVASEAINGWIPRKADTFEKLDKIGQ
GTYSSVYKARDLVNDKVVALKRVRFEKMDPESIRFMAREIVILRRLDHPNIIKLEGLIVS
RTSCSLYLVFEYMEHDLTGLAALPGIKFTEPQVKCYMRQLLSGLDHCHNRGVLHRDIKGS
NLLIDNHGTLKIADFGLANFFDNQQIVPLTSRVVTLWYRPPELLLGASHYGTAVDLWSTG
CILGELYVAKPIMPGRTEVEQLHKIFKLCGSPTEDYWKKTKLSYSAVFKPIQPYKRCIGE
RFKEVPPSAVGLLETLLSIDPALRGTAVGALESEFFTTKPFACDPSSLPTYPPSKEIDAK
MREEEARRGGTTNGSKERQAVPARDANAKLASSMQRRPSSSNPKSQSDRFNPSKEAAARF
PNDPPKPSQAVKETTKDHMENLSDRFSAKDNLDDLSETFSHSVPMALGVFGKKYDDISIG
PNRADLSDLVASRSVVSGDNRDRCVQLQSAHQVERTARLLDEHSRKQDQKYFTQNFPSSH
QFESGRTCTKEANLVSSHKHVNLRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400034198
Transcript Infomation

pacid=37478304 locus=PGSC0003DMG400013147 ID=PGSC0003DMT400034198.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTGTTTGTGGTAAACTTTCTCGAAAGGTCAAAGATCGTCGGGATGGTCAAAAG
AAGAGAGAGTTAGATAAAGGGGCATCAGCTGTGAGTTCAAAGAGAGAAAAGAGTTTTAGG
GTGAAAGAGAAATCGGAGAATGGTGATATAAGTGTTGGTTCATTCGACAGGAAGCCTAAT
GGATCTAAAAAGGTTGGGGACAATCACTGCGAGAAGCTTGAAGTTGTCCCAAAAGCAATG
GAAGGAGAGTTGATTGCTGCAGGATGGCCTTCTTCGCTTGCTGCAGTAGCCAGTGAAGCT
ATTAATGGTTGGATTCCACGCAAGGCTGATACTTTTGAGAAATTAGACAAGATTGGTCAA
GGGACTTATAGTAGTGTATACAAGGCTCGTGACCTGGTTAATGATAAAGTTGTTGCGCTT
AAAAGAGTAAGGTTCGAAAAAATGGATCCTGAAAGTATCAGATTTATGGCTAGGGAAATT
GTTATTCTGCGAAGGCTTGATCATCCAAATATCATCAAATTGGAAGGCTTGATCGTATCA
AGAACATCTTGTAGTCTGTACCTTGTATTTGAGTACATGGAACATGATCTCACTGGACTG
GCAGCTCTTCCCGGTATTAAATTTACAGAGCCACAGGTTAAATGTTACATGCGGCAGCTT
TTAAGTGGACTTGACCATTGCCACAATCGGGGTGTTCTGCATCGGGACATCAAGGGTTCT
AATCTTCTCATTGACAATCATGGCACTTTAAAGATTGCAGATTTTGGGTTGGCAAACTTT
TTCGATAACCAGCAAATTGTTCCATTAACAAGCCGTGTTGTGACTCTTTGGTATCGACCA
CCAGAGCTCTTACTTGGAGCAAGTCATTATGGAACTGCAGTAGACTTGTGGAGTACTGGC
TGCATTCTCGGAGAATTATATGTTGCCAAGCCCATAATGCCCGGTAGGACAGAGGTGGAA
CAACTACATAAGATCTTTAAGCTTTGTGGTTCACCAACTGAGGATTATTGGAAGAAAACA
AAACTATCCTATTCAGCAGTATTTAAACCTATACAGCCTTACAAGCGGTGTATTGGCGAA
AGATTTAAGGAGGTTCCTCCATCTGCCGTGGGGTTACTGGAAACATTACTTTCTATAGAT
CCTGCACTTAGAGGAACAGCAGTTGGGGCTCTTGAGAGTGAGTTCTTCACCACGAAGCCA
TTTGCTTGTGATCCTTCGAGTTTGCCAACATACCCTCCCAGCAAGGAAATTGATGCAAAA
ATGCGGGAAGAGGAAGCCAGAAGAGGAGGGACTACAAATGGATCAAAAGAACGTCAAGCA
GTTCCAGCACGTGATGCTAATGCCAAGCTAGCTAGCTCAATGCAGAGGAGGCCGAGCAGT
TCCAATCCTAAGAGCCAAAGTGACCGGTTCAATCCCTCGAAGGAAGCTGCTGCTCGTTTT
CCAAATGATCCTCCTAAACCATCACAAGCAGTGAAAGAAACCACGAAAGATCACATGGAG
AATCTTTCAGATAGATTTTCAGCCAAAGATAACCTTGACGATCTTTCAGAGACATTTTCT
CATTCAGTCCCTATGGCTCTAGGGGTATTTGGGAAGAAATATGATGATATCTCCATTGGT
CCCAACAGAGCTGACTTGTCAGACTTAGTAGCATCCAGGTCCGTTGTGTCCGGAGACAAT
CGAGATAGATGTGTTCAGCTACAATCAGCCCATCAAGTAGAAAGGACAGCACGGCTTCTA
GACGAACATTCAAGGAAGCAGGATCAGAAGTATTTCACGCAGAACTTTCCCAGTTCTCAT
CAATTTGAAAGTGGAAGGACTTGTACGAAGGAGGCAAATCTGGTAAGTTCTCATAAACAC
GTAAATCTAAGAGTTTGA