Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034161
CDS Infomation

pacid=37478603 polypeptide=PGSC0003DMP400023240 locus=PGSC0003DMG400013126 ID=PGSC0003DMT400034161.v4.03 annot-version=v4.03
Sequence

ATGCATCAGAAAAAATCAGAAGTTCAGATCGGAAAAGAAAGCAGTTGCATCTCTTCCGAT
TTCAATCCTACACCGCCCCTTGTTTCTTCTTCTTCTTTATCTGTTCATCAGAAACATACT
TTGATTTCTCCTCAACATACTGCTATTCAGATTTATGTAGAAAATGATAATGACCCAATT
CAACCTCATACCCCAACCAAAACCACCCCACATAAGAGACCTCATTTGGGTTCTAAATCT
GTCTTCAAATCTCCATCTTTATCTACTTCTCTTCATAAATACCCTTTAAAGCCTCAAAAC
ACATATAACAATTTCCATATATATCCTTGTCTTTGTCATCTTCGTCGAATTTTCCGTCTC
CATATACGCCTTATACTCCTTCTTTCTCTACCCTTTTTCTATTTCTTCGTTTCCCATCCA
ACCAATTCTTTCTTTTTGGATTTTCTTTCTGCTTTTGCATTTTCCTCAGCCCTTTTGTTT
TCACTAAATTTAGCACTCCCCAGACTTCCCTCAATTCGCTTATTCCTTTCTAGGTCTTTG
CCAATTAAACCTTCTTCCTCCAAACAAGTTTCTAGGAATGCTTTGCCTGTCTTTTGGTCA
ATTGGGTCACGAGCAAAAATTGATAAAACCGTGAATTCAGGTTGTTATGTTCAGGCTTAT
AGTAATGGGGATGTCTATGAAGGGGAGTTTCATAAGGGCAAATGTAGTGGAAGTGGAGTT
TATTACTATTATATGAGTGGCAGGTTTGAAGGGGATTGGGTTGATGGCAAGTATGATGGG
TATGGGGTCGAAACATGGGCAAGGGGGAGCAGATATAGGGGCCAATACAGGCAAGGTCTT
AGGCATGGATTTGGGGTTTATAGGTTCTTTACAGGTGATGTATATGCTGGGGAATGGTCT
AATGGACAAAGTCACGGCTGTGGAGTTCATACTTGTGAGGATGGGAGCAGGTATGTAGGT
GAATTCAAGTGGGGAGTTAAGCATGGCCTTGGACATTACCACTTCAGGAATGGAGATAAT
TATGCTGGGGAATATTTTGCTGATAAGATGCATGGTTTCGGAGTATATGTTTTTGCAAAT
GGGCATCGGTATGAAGGAGCCTGGCATGAGGGAAGGAGACAAGGGCTTGGGATGTATACT
TTTAGAAACGGGGAAACCCAGTCTGGTCATTGGCAAAATGGGGTCCTTGACATTCCAAGT
ACACAGAACAACTCCTATCCTGTATCTCCTGTTGCTGTTTACCATTCCAAAGTGCTAAAT
GCTGTACAGGAAGCACGTCGAGCAGCAGAAAGGGCCTATGATGTGGCTAAGGTTGATGAG
AGAGTGAACAGGGCAGTTTCAGCAGCCAACAAAGCAGCCAATGCAGCTAGAGTAGCTGCA
GTGAAAGCTGTGCAAAAGCAGATGCATCATCATCGCAGGAATAGTGATGACCTTGCAATG
TTCTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023240
PEP Infomation

pacid=37478603 transcript=PGSC0003DMT400034161 locus=PGSC0003DMG400013126 ID=PGSC0003DMT400034161.v4.03 annot-version=v4.03
Sequence

MHQKKSEVQIGKESSCISSDFNPTPPLVSSSSLSVHQKHTLISPQHTAIQIYVENDNDPI
QPHTPTKTTPHKRPHLGSKSVFKSPSLSTSLHKYPLKPQNTYNNFHIYPCLCHLRRIFRL
HIRLILLLSLPFFYFFVSHPTNSFFLDFLSAFAFSSALLFSLNLALPRLPSIRLFLSRSL
PIKPSSSKQVSRNALPVFWSIGSRAKIDKTVNSGCYVQAYSNGDVYEGEFHKGKCSGSGV
YYYYMSGRFEGDWVDGKYDGYGVETWARGSRYRGQYRQGLRHGFGVYRFFTGDVYAGEWS
NGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDNYAGEYFADKMHGFGVYVFAN
GHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTQNNSYPVSPVAVYHSKVLN
AVQEARRAAERAYDVAKVDERVNRAVSAANKAANAARVAAVKAVQKQMHHHRRNSDDLAM
FY*

Transcript Sequence

Transcript ID

PGSC0003DMT400034161
Transcript Infomation

pacid=37478603 locus=PGSC0003DMG400013126 ID=PGSC0003DMT400034161.v4.03 annot-version=v4.03
Sequence

ATGCATCAGAAAAAATCAGAAGTTCAGATCGGAAAAGAAAGCAGTTGCATCTCTTCCGAT
TTCAATCCTACACCGCCCCTTGTTTCTTCTTCTTCTTTATCTGTTCATCAGAAACATACT
TTGATTTCTCCTCAACATACTGCTATTCAGATTTATGTAGAAAATGATAATGACCCAATT
CAACCTCATACCCCAACCAAAACCACCCCACATAAGAGACCTCATTTGGGTTCTAAATCT
GTCTTCAAATCTCCATCTTTATCTACTTCTCTTCATAAATACCCTTTAAAGCCTCAAAAC
ACATATAACAATTTCCATATATATCCTTGTCTTTGTCATCTTCGTCGAATTTTCCGTCTC
CATATACGCCTTATACTCCTTCTTTCTCTACCCTTTTTCTATTTCTTCGTTTCCCATCCA
ACCAATTCTTTCTTTTTGGATTTTCTTTCTGCTTTTGCATTTTCCTCAGCCCTTTTGTTT
TCACTAAATTTAGCACTCCCCAGACTTCCCTCAATTCGCTTATTCCTTTCTAGGTCTTTG
CCAATTAAACCTTCTTCCTCCAAACAAGTTTCTAGGAATGCTTTGCCTGTCTTTTGGTCA
ATTGGGTCACGAGCAAAAATTGATAAAACCGTGAATTCAGGTTGTTATGTTCAGGCTTAT
AGTAATGGGGATGTCTATGAAGGGGAGTTTCATAAGGGCAAATGTAGTGGAAGTGGAGTT
TATTACTATTATATGAGTGGCAGGTTTGAAGGGGATTGGGTTGATGGCAAGTATGATGGG
TATGGGGTCGAAACATGGGCAAGGGGGAGCAGATATAGGGGCCAATACAGGCAAGGTCTT
AGGCATGGATTTGGGGTTTATAGGTTCTTTACAGGTGATGTATATGCTGGGGAATGGTCT
AATGGACAAAGTCACGGCTGTGGAGTTCATACTTGTGAGGATGGGAGCAGGTATGTAGGT
GAATTCAAGTGGGGAGTTAAGCATGGCCTTGGACATTACCACTTCAGGAATGGAGATAAT
TATGCTGGGGAATATTTTGCTGATAAGATGCATGGTTTCGGAGTATATGTTTTTGCAAAT
GGGCATCGGTATGAAGGAGCCTGGCATGAGGGAAGGAGACAAGGGCTTGGGATGTATACT
TTTAGAAACGGGGAAACCCAGTCTGGTCATTGGCAAAATGGGGTCCTTGACATTCCAAGT
ACACAGAACAACTCCTATCCTGTATCTCCTGTTGCTGTTTACCATTCCAAAGTGCTAAAT
GCTGTACAGGAAGCACGTCGAGCAGCAGAAAGGGCCTATGATGTGGCTAAGGTTGATGAG
AGAGTGAACAGGGCAGTTTCAGCAGCCAACAAAGCAGCCAATGCAGCTAGAGTAGCTGCA
GTGAAAGCTGTGCAAAAGCAGATGCATCATCATCGCAGGAATAGTGATGACCTTGCAATG
TTCTACTGA