Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034106
CDS Infomation

pacid=37426507 polypeptide=PGSC0003DMP400023204 locus=PGSC0003DMG400013102 ID=PGSC0003DMT400034106.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGAAAGTGGCAGAAGTTTTGCCCGAAGGAACCAATTGTTGGAGATAGAGAAA
CAGGTTCATAACTGGTGGACAGAAGGTGATGTTTTCAAAGCTGAACCTAAAGAATCACCT
CCTAAAGTGGGGGAAAAGTTCTTTGGGAATTTCCCTTTTCCTTATATGAATGGATATCTA
CATTTGGGTCATGCTTTTTCAGTGTCAAAACTAGAATTTGCGGCAGCATATCATAGATTG
AAAGGTGCTACTGTTCTTTTGCCTTTTGCCTTTCACTGCACTGGGATGCCCATAAAGGCA
TCTTCGGATAAGCTTTCGAGGGAGATATCGATGTTTGGGAACCCACCTGTTTTTCCTGCT
AGGGTAGAGGAGAATGTTGAAACAGAAGTGAAGGTTGAGACTGAAGGAAATCAGCCTGCA
CCGGGTGGAAAATTTAAAGGAAAAAAATCAAAGGCAGTTGCGAAGACGGGTGGTGATAAG
TACCAGTGGGAGATAATGAGGAGTTATGGTCTGTCGGATGAGGAGATTGCCAAGTTTACA
GACCCATATTACTGGCTAACATACTTTCCACCACTGGCCGTAGAGGATCTGAAGGAGTTT
GGATTGGGTTGTGATTGGCGTAGGGTTTTTATTACAACTGATATAAATCCATACTTTGAT
TCGTTTGTGCGGTGGCAAATGCGGAAGCTGAAAGCCTCGGGAAAGATTGTTAAAGATCTC
AGGTACACCGTATATTCACCCCTAGATGGTCAGCCATGTGCTGACCATGACCGTGCTTCC
GGTGAAGGAGTTATTCCTCAGGAGTATACTCTTATTAAGATGGAAGTTGTCTCACCTTTT
CCACCAAAGATGAGTGCTCTGGAGGGGAAAAAGGTATTTCTCGCAGCAGCTACACTGAGA
CCAGAGACCATGTATGGGCAAACAAATGCTTGGGTTTTGCCTGAAGGAAAATATGGGGCA
TTTGAGATTAATGATACTGAGGTTTTTGTCATGACTTATAGGGCAGCTCTTAATCTTGCC
TACCAAAGGTTGTCTCATATCCCTGAGAAGCCTACTTGTTTGGTTGAATTGTCTGGTCAA
GATCTTATCGGTTTGCCCTTGAGGTCTCCCTTGGCATTTAATGAGATAATATACACTCTA
CCCATGTTATCTGTTCTTACTGATAAGGGTACTGGAATTGTAACTAGTGTTCCCAGTGAT
TCCCCTGATGATTATATGGCCCTCCATGATTTGAAGTCAAAGCCAGCTTTCAGGGCCAAA
TTTGGTGTGAAGGATGAGTGGGTTGTGCCGTTTGAGATAGTCCCAATTATCAACCATCCA
GATTTTGGAGACAGGTCAGCTGAGAGGATTTGCATTGAAAAAAAAATCAAGAGTCAAAAT
GAGAGAGATAAGCTTGATGAGGCAAAGAAAACAATTTACAAGGGCGGGTTTTATGAGGGA
ATCATGATTGTTGGAGAGTTTGCTGGTATGAAAGTCCAAGAAGCTAAAGGTCTGATCAGG
AGCAACCTTTTGGAGACAAATCAAGCTGTAGTATATAGTGAACCTGAGAAAAAAGTCATG
TCGCGATCCGGGGATGAGTGTGTTGTGGCTTTGACTGATCAATGGTATATCACTTATGGA
GAATCAGAATGGAGGAAGGCTGCAGAGGAGTGTTTGGCCAGTATGAATCTCTACTCTGAT
GAGACACGACATGGCTTTGAGCACACTCTCAGCTGGCTTAATCAGTGGGCTTGTTCTCGC
AGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTCGAATCCTTATCC
GATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATG
TATGGTAATGATCATTCTTCAGTGAAACCAGAGCACTTGACAGATGATGTCTGGGAATTC
TTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTCTATATCTTCTTCTCTTCTAAAGGAG
ATGAAGCAGGAATTTCTCTACTGGTATCCATTGGATCTCAGAGTTTCTGGCAAGGATCTT
ATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCAC
TGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCCAAG
TCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACA
CGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAACTTCGTCTTTGAAACA
GCTAATGCTGCTATCTTACGTCTTACAAAAGAAATGGCATGGATGCAGGAAGTCCTTGAT
GCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCACGTATTTGCTAAT
GAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTATATGTTCCGGGAT
GCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTTTCCTGT
GGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTT
ATTACTCCTATCTGTCCACACTATGCTGAATATGCCTGGAGAAAGCTTTTGAAGAAGGAT
GGTTATGGCATCAAAGCTGGGTGGCCAGAGGCTGATTTGCCGGATCTTAGCCTTAAGAAG
GCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTT
TCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGAGGGCCTG
ATATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGG
AAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAG
AAGAGTGAGATCGGGCAACAAGGCAATTTCAAACAAATACAAAAGCTTTGTATGCCATTC
TTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTT
CCTTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGT
CTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAGAGAGAGCAGGGCCTCAT
GCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023204
PEP Infomation

pacid=37426507 transcript=PGSC0003DMT400034106 locus=PGSC0003DMG400013102 ID=PGSC0003DMT400034106.v4.03 annot-version=v4.03
Sequence

MAEESGRSFARRNQLLEIEKQVHNWWTEGDVFKAEPKESPPKVGEKFFGNFPFPYMNGYL
HLGHAFSVSKLEFAAAYHRLKGATVLLPFAFHCTGMPIKASSDKLSREISMFGNPPVFPA
RVEENVETEVKVETEGNQPAPGGKFKGKKSKAVAKTGGDKYQWEIMRSYGLSDEEIAKFT
DPYYWLTYFPPLAVEDLKEFGLGCDWRRVFITTDINPYFDSFVRWQMRKLKASGKIVKDL
RYTVYSPLDGQPCADHDRASGEGVIPQEYTLIKMEVVSPFPPKMSALEGKKVFLAAATLR
PETMYGQTNAWVLPEGKYGAFEINDTEVFVMTYRAALNLAYQRLSHIPEKPTCLVELSGQ
DLIGLPLRSPLAFNEIIYTLPMLSVLTDKGTGIVTSVPSDSPDDYMALHDLKSKPAFRAK
FGVKDEWVVPFEIVPIINHPDFGDRSAERICIEKKIKSQNERDKLDEAKKTIYKGGFYEG
IMIVGEFAGMKVQEAKGLIRSNLLETNQAVVYSEPEKKVMSRSGDECVVALTDQWYITYG
ESEWRKAAEECLASMNLYSDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEEFLVESLS
DSTIYMAYYTVAHFLQKGDMYGNDHSSVKPEHLTDDVWEFLFCDGPFPENSSISSSLLKE
MKQEFLYWYPLDLRVSGKDLIQNHLTFCIYNHTALFPKHHWPRGFRCNGHIMLNSEKMSK
STGNFRTLRQAIEEFSADATRFSLADAGDGMDDANFVFETANAAILRLTKEMAWMQEVLD
AETSLRTGPPSTYADHVFANEINIAVRTTEKNYSEYMFRDALKTGFYDLQAARDEYRLSC
GSGGMNRDLLWRFMDVQTRLITPICPHYAEYAWRKLLKKDGYGIKAGWPEADLPDLSLKK
ANKYLQDTIVSMRKLLQKQVSGSKKGNANLTSQNKPSEGLIYVDEQYSGWKKECLGILQR
KFDTSTGSFAPDKEILSELQKSEIGQQGNFKQIQKLCMPFLRFKKDEVVAVGVQALDLKL
PFGEIEVLEKNSELIKRQLGLETLEILSMTDDALERAGPHAAVVKQNPPSPGNPTAIFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400034106
Transcript Infomation

pacid=37426507 locus=PGSC0003DMG400013102 ID=PGSC0003DMT400034106.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGAAAGTGGCAGAAGTTTTGCCCGAAGGAACCAATTGTTGGAGATAGAGAAA
CAGGTTCATAACTGGTGGACAGAAGGTGATGTTTTCAAAGCTGAACCTAAAGAATCACCT
CCTAAAGTGGGGGAAAAGTTCTTTGGGAATTTCCCTTTTCCTTATATGAATGGATATCTA
CATTTGGGTCATGCTTTTTCAGTGTCAAAACTAGAATTTGCGGCAGCATATCATAGATTG
AAAGGTGCTACTGTTCTTTTGCCTTTTGCCTTTCACTGCACTGGGATGCCCATAAAGGCA
TCTTCGGATAAGCTTTCGAGGGAGATATCGATGTTTGGGAACCCACCTGTTTTTCCTGCT
AGGGTAGAGGAGAATGTTGAAACAGAAGTGAAGGTTGAGACTGAAGGAAATCAGCCTGCA
CCGGGTGGAAAATTTAAAGGAAAAAAATCAAAGGCAGTTGCGAAGACGGGTGGTGATAAG
TACCAGTGGGAGATAATGAGGAGTTATGGTCTGTCGGATGAGGAGATTGCCAAGTTTACA
GACCCATATTACTGGCTAACATACTTTCCACCACTGGCCGTAGAGGATCTGAAGGAGTTT
GGATTGGGTTGTGATTGGCGTAGGGTTTTTATTACAACTGATATAAATCCATACTTTGAT
TCGTTTGTGCGGTGGCAAATGCGGAAGCTGAAAGCCTCGGGAAAGATTGTTAAAGATCTC
AGGTACACCGTATATTCACCCCTAGATGGTCAGCCATGTGCTGACCATGACCGTGCTTCC
GGTGAAGGAGTTATTCCTCAGGAGTATACTCTTATTAAGATGGAAGTTGTCTCACCTTTT
CCACCAAAGATGAGTGCTCTGGAGGGGAAAAAGGTATTTCTCGCAGCAGCTACACTGAGA
CCAGAGACCATGTATGGGCAAACAAATGCTTGGGTTTTGCCTGAAGGAAAATATGGGGCA
TTTGAGATTAATGATACTGAGGTTTTTGTCATGACTTATAGGGCAGCTCTTAATCTTGCC
TACCAAAGGTTGTCTCATATCCCTGAGAAGCCTACTTGTTTGGTTGAATTGTCTGGTCAA
GATCTTATCGGTTTGCCCTTGAGGTCTCCCTTGGCATTTAATGAGATAATATACACTCTA
CCCATGTTATCTGTTCTTACTGATAAGGGTACTGGAATTGTAACTAGTGTTCCCAGTGAT
TCCCCTGATGATTATATGGCCCTCCATGATTTGAAGTCAAAGCCAGCTTTCAGGGCCAAA
TTTGGTGTGAAGGATGAGTGGGTTGTGCCGTTTGAGATAGTCCCAATTATCAACCATCCA
GATTTTGGAGACAGGTCAGCTGAGAGGATTTGCATTGAAAAAAAAATCAAGAGTCAAAAT
GAGAGAGATAAGCTTGATGAGGCAAAGAAAACAATTTACAAGGGCGGGTTTTATGAGGGA
ATCATGATTGTTGGAGAGTTTGCTGGTATGAAAGTCCAAGAAGCTAAAGGTCTGATCAGG
AGCAACCTTTTGGAGACAAATCAAGCTGTAGTATATAGTGAACCTGAGAAAAAAGTCATG
TCGCGATCCGGGGATGAGTGTGTTGTGGCTTTGACTGATCAATGGTATATCACTTATGGA
GAATCAGAATGGAGGAAGGCTGCAGAGGAGTGTTTGGCCAGTATGAATCTCTACTCTGAT
GAGACACGACATGGCTTTGAGCACACTCTCAGCTGGCTTAATCAGTGGGCTTGTTCTCGC
AGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTCGAATCCTTATCC
GATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATG
TATGGTAATGATCATTCTTCAGTGAAACCAGAGCACTTGACAGATGATGTCTGGGAATTC
TTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTCTATATCTTCTTCTCTTCTAAAGGAG
ATGAAGCAGGAATTTCTCTACTGGTATCCATTGGATCTCAGAGTTTCTGGCAAGGATCTT
ATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCAC
TGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCCAAG
TCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACA
CGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAACTTCGTCTTTGAAACA
GCTAATGCTGCTATCTTACGTCTTACAAAAGAAATGGCATGGATGCAGGAAGTCCTTGAT
GCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCACGTATTTGCTAAT
GAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTATATGTTCCGGGAT
GCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTTTCCTGT
GGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTT
ATTACTCCTATCTGTCCACACTATGCTGAATATGCCTGGAGAAAGCTTTTGAAGAAGGAT
GGTTATGGCATCAAAGCTGGGTGGCCAGAGGCTGATTTGCCGGATCTTAGCCTTAAGAAG
GCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTT
TCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGAGGGCCTG
ATATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGG
AAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAG
AAGAGTGAGATCGGGCAACAAGGCAATTTCAAACAAATACAAAAGCTTTGTATGCCATTC
TTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTT
CCTTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGT
CTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAGAGAGAGCAGGGCCTCAT
GCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGA