Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034064
CDS Infomation

pacid=37426621 polypeptide=PGSC0003DMP400023177 locus=PGSC0003DMG400013091 ID=PGSC0003DMT400034064.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTATAGTGCTGTAACTTGTCTTCTTCAAACTCTTGAGCAACGAAATCCACAA
CTCTTTGATGCTCTCACTGCTAAAGCGCTCGAATCTATTCATGCTACTGCTCAATATTTT
TATAATTTTCTTGAAGGATCAGGCAATAAGAATGTTGAAAAAATCAAATCTTTGGAGGAA
AAAATTAGAATTGCTGCTAATCATGCAAAATATGCTGTTGAGCTGAAGATTTCCGATATA
ATCGATGGCATATCCTACACAAATGCAAATGTACAACAGGAGGATTTGCCAGTAGTTGTT
GATGAAATGTATACAATAAAGAAAGAAATGATGGAGATTATTGCTTCTGGTTTTAACACA
ACTACTCATGATGATGATGATGATCAAATTCTTGAATTATCGAGGGATTCCTTAATTGGC
ACTTCTTCTACATATTTGGAAGATGATATTGTGCACGGACTTGATGATGACTTGGAGATC
ATAATTAAAAGATTATTGACAGGACAATCGCGGGATCTTGAAATTGTCACAATAGCAGGC
ATGGGTGGCATTGGCAAGACCACACTCGCTAGAAAAGCGTATAATCATCTCGCAATCAGG
TATCATCACTTTGACATTCTTGCTTGGGTTACAATATCTCAAGAATTTCGAGGTAGAAAT
GTGTTGTTAGAAGCTTTACGTTGCATTTCAAAGCAAACAGTTAGTTCCAATGCAAAAGAT
TATGATAACAAGGATGACTCTGACTTAGCAGGCCTAGTGAAGAAAGAGTTAAATGGTAGA
AGATACTTTGTTGTTGTTGATGATATTTGGAGTAAGGACGTTTGGGATAGCATAAGAGGA
ATATTTCCTGATTGCAACAATAGGAGTCGAGTCTTATTGACTACTAGGGAAACTGAGGTA
GCGATTTATGCAACTACTAGTAGCCCTCATAAGATGAACCTCTTGGATTTAGATAACAGT
TGGAAGTTACTTCGTGATCAGGTTTTTGGACTAGAACACGATCATCCTCCTGAGTTGGGA
GAAATTGGAAAGGAAATAGCAGAAAAATGCCAAGGACTACCCTTTACGATTTCAGTTATT
TCTGGACATCTCTCTAAAGTGGACAGGACATTAGAAAGTTGGAAGGATGTTGCCCGAACC
TTAAGCGAAGTCCTTGCTAGTCATCCAGATAAATGCTTAGGAGTGCTCGGTTTGAGTTAC
CACCACTTGCCTATTCACCTCAAACCTTGTTTTCTTTCTATGGCTTGTTTCCCAGAAGAT
TTTCAAGTTGATACTCGGAGATTGATCCAATTATGGATCGCAGAAGGTTTCATAAGGATG
TCTGGTAGAAGTCGTAAAAGCTTGGAGGAAGTGGCGGAATATTATTTGGAGGATCTTATT
AGCAGGAACTTGATAATGGCAAGAAAAAGGAGATTCAATGGTGAGATAAAAGAATGTGCA
ATGCATGATCTACTACGTGAATTCTGTTTGATAGAAGCTAAGATGACAAAGTTTATATAT
GTTGTGAGAACTGACCAAGAAGTTCTTACTCTTCCAACACAAAAGCATAATGGTGGTCGC
TTCAGTTTTCAATCCCTATTTTGTTCAGCTGAAGATTTTATCTATCGATTACCATTTTTT
ACCAGATCTATCTACATCTTTTGTTCAACACGCTTTGTTCATTTCAGCCATTTCAATCTT
CTTAGGGTATTGGTCTTCCCCCATTCTTGTTTTGCATTTCCATTTGACATTACTAATTTA
TTTCATTTGAGATATCTTGAAGTTGAAAGGTTTGATTGTCCTCCTGAATCAATCTCAAAG
CTTCAGAATTTGCAAACTCTAATTCAGCATGAACAATGTGGGAGCTATATAACCGTACCA
GGGACGATTTGGTTGATGAAGAACTTGAGGCATGTGTATCTGGGGTCACCGAGTAATTTA
CCCAGTCCTAGAATATCAGAACTTGAGATAGGAATATTGCCAAATCTAGAGGAACTTTCT
GGTCTATGTTCCTTCAGTTGTACAAATGACGTTTTCAAAAGCATTCCCAATCTAAAGAGA
TTAATGGTTCGTGTATCTTGTTCGAAAGAAGATGTTATGACCAAACGCCTTATTGATATG
TCCAGCTTGACAAAACTTGAAGCATTGAAGTGTTTTAGAAATGCTTGGGAAGCGATTTCC
ATCAGGAGGTTCAGTTTCCCAACATCACTTAAAATGTTGACTTTAACCAGTAACTATCTT
TTTCCGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400023177
PEP Infomation

pacid=37426621 transcript=PGSC0003DMT400034064 locus=PGSC0003DMG400013091 ID=PGSC0003DMT400034064.v4.03 annot-version=v4.03
Sequence

MAAYSAVTCLLQTLEQRNPQLFDALTAKALESIHATAQYFYNFLEGSGNKNVEKIKSLEE
KIRIAANHAKYAVELKISDIIDGISYTNANVQQEDLPVVVDEMYTIKKEMMEIIASGFNT
TTHDDDDDQILELSRDSLIGTSSTYLEDDIVHGLDDDLEIIIKRLLTGQSRDLEIVTIAG
MGGIGKTTLARKAYNHLAIRYHHFDILAWVTISQEFRGRNVLLEALRCISKQTVSSNAKD
YDNKDDSDLAGLVKKELNGRRYFVVVDDIWSKDVWDSIRGIFPDCNNRSRVLLTTRETEV
AIYATTSSPHKMNLLDLDNSWKLLRDQVFGLEHDHPPELGEIGKEIAEKCQGLPFTISVI
SGHLSKVDRTLESWKDVARTLSEVLASHPDKCLGVLGLSYHHLPIHLKPCFLSMACFPED
FQVDTRRLIQLWIAEGFIRMSGRSRKSLEEVAEYYLEDLISRNLIMARKRRFNGEIKECA
MHDLLREFCLIEAKMTKFIYVVRTDQEVLTLPTQKHNGGRFSFQSLFCSAEDFIYRLPFF
TRSIYIFCSTRFVHFSHFNLLRVLVFPHSCFAFPFDITNLFHLRYLEVERFDCPPESISK
LQNLQTLIQHEQCGSYITVPGTIWLMKNLRHVYLGSPSNLPSPRISELEIGILPNLEELS
GLCSFSCTNDVFKSIPNLKRLMVRVSCSKEDVMTKRLIDMSSLTKLEALKCFRNAWEAIS
IRRFSFPTSLKMLTLTSNYLFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400034064
Transcript Infomation

pacid=37426621 locus=PGSC0003DMG400013091 ID=PGSC0003DMT400034064.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTATAGTGCTGTAACTTGTCTTCTTCAAACTCTTGAGCAACGAAATCCACAA
CTCTTTGATGCTCTCACTGCTAAAGCGCTCGAATCTATTCATGCTACTGCTCAATATTTT
TATAATTTTCTTGAAGGATCAGGCAATAAGAATGTTGAAAAAATCAAATCTTTGGAGGAA
AAAATTAGAATTGCTGCTAATCATGCAAAATATGCTGTTGAGCTGAAGATTTCCGATATA
ATCGATGGCATATCCTACACAAATGCAAATGTACAACAGGAGGATTTGCCAGTAGTTGTT
GATGAAATGTATACAATAAAGAAAGAAATGATGGAGATTATTGCTTCTGGTTTTAACACA
ACTACTCATGATGATGATGATGATCAAATTCTTGAATTATCGAGGGATTCCTTAATTGGC
ACTTCTTCTACATATTTGGAAGATGATATTGTGCACGGACTTGATGATGACTTGGAGATC
ATAATTAAAAGATTATTGACAGGACAATCGCGGGATCTTGAAATTGTCACAATAGCAGGC
ATGGGTGGCATTGGCAAGACCACACTCGCTAGAAAAGCGTATAATCATCTCGCAATCAGG
TATCATCACTTTGACATTCTTGCTTGGGTTACAATATCTCAAGAATTTCGAGGTAGAAAT
GTGTTGTTAGAAGCTTTACGTTGCATTTCAAAGCAAACAGTTAGTTCCAATGCAAAAGAT
TATGATAACAAGGATGACTCTGACTTAGCAGGCCTAGTGAAGAAAGAGTTAAATGGTAGA
AGATACTTTGTTGTTGTTGATGATATTTGGAGTAAGGACGTTTGGGATAGCATAAGAGGA
ATATTTCCTGATTGCAACAATAGGAGTCGAGTCTTATTGACTACTAGGGAAACTGAGGTA
GCGATTTATGCAACTACTAGTAGCCCTCATAAGATGAACCTCTTGGATTTAGATAACAGT
TGGAAGTTACTTCGTGATCAGGTTTTTGGACTAGAACACGATCATCCTCCTGAGTTGGGA
GAAATTGGAAAGGAAATAGCAGAAAAATGCCAAGGACTACCCTTTACGATTTCAGTTATT
TCTGGACATCTCTCTAAAGTGGACAGGACATTAGAAAGTTGGAAGGATGTTGCCCGAACC
TTAAGCGAAGTCCTTGCTAGTCATCCAGATAAATGCTTAGGAGTGCTCGGTTTGAGTTAC
CACCACTTGCCTATTCACCTCAAACCTTGTTTTCTTTCTATGGCTTGTTTCCCAGAAGAT
TTTCAAGTTGATACTCGGAGATTGATCCAATTATGGATCGCAGAAGGTTTCATAAGGATG
TCTGGTAGAAGTCGTAAAAGCTTGGAGGAAGTGGCGGAATATTATTTGGAGGATCTTATT
AGCAGGAACTTGATAATGGCAAGAAAAAGGAGATTCAATGGTGAGATAAAAGAATGTGCA
ATGCATGATCTACTACGTGAATTCTGTTTGATAGAAGCTAAGATGACAAAGTTTATATAT
GTTGTGAGAACTGACCAAGAAGTTCTTACTCTTCCAACACAAAAGCATAATGGTGGTCGC
TTCAGTTTTCAATCCCTATTTTGTTCAGCTGAAGATTTTATCTATCGATTACCATTTTTT
ACCAGATCTATCTACATCTTTTGTTCAACACGCTTTGTTCATTTCAGCCATTTCAATCTT
CTTAGGGTATTGGTCTTCCCCCATTCTTGTTTTGCATTTCCATTTGACATTACTAATTTA
TTTCATTTGAGATATCTTGAAGTTGAAAGGTTTGATTGTCCTCCTGAATCAATCTCAAAG
CTTCAGAATTTGCAAACTCTAATTCAGCATGAACAATGTGGGAGCTATATAACCGTACCA
GGGACGATTTGGTTGATGAAGAACTTGAGGCATGTGTATCTGGGGTCACCGAGTAATTTA
CCCAGTCCTAGAATATCAGAACTTGAGATAGGAATATTGCCAAATCTAGAGGAACTTTCT
GGTCTATGTTCCTTCAGTTGTACAAATGACGTTTTCAAAAGCATTCCCAATCTAAAGAGA
TTAATGGTTCGTGTATCTTGTTCGAAAGAAGATGTTATGACCAAACGCCTTATTGATATG
TCCAGCTTGACAAAACTTGAAGCATTGAAGTGTTTTAGAAATGCTTGGGAAGCGATTTCC
ATCAGGAGGTTCAGTTTCCCAACATCACTTAAAATGTTGACTTTAACCAGTAACTATCTT
TTTCCGTAG