Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400034054
CDS Infomation

pacid=37438231 polypeptide=PGSC0003DMP400023171 locus=PGSC0003DMG400013088 ID=PGSC0003DMT400034054.v4.03 annot-version=v4.03
Sequence

ATGAATACTAGCAGTTGCATTGGTATTTCAACCATGAAACCATGTTGTAGAATCCTCAGC
AGTTGTAAAGGTTCATCCTTTATTGGTTACTCATTTGGGAAATGTAATCATTTAATTAAT
GATAATTTGTCGAATCCGCACTGCAAATTAGATGATATACATAGGGTTTCTAATTATGCT
AATAGGGTTATAGGGGTTATTGGTTCGAATCGGAGTGTTTTTTGTGGATCCGATTCGAAT
TGGAGGCATGCTAGGATTCTTTTGGGTTTTAGGTTGAATAAGGAAACTAGGTGCTACTGT
GTCAATGCAAATGCTGCATCTGATGTAAGGAATCATTCAACTTCAATTGAAGCTCAAGTG
AATGAGAAGATCTTCGATAAGTTTTACATACATGGGGGCTTAAATGTGAAGCCTTTAGTC
ATTGACAGAAAAGAATCAGGTAAAGACGTAGCTAAAGTAGAAAAAGTTAGGACAGATGTC
AATGATGGATCAGGTGTAAATGTAAAGCATCCTGATAATTATTTAAATGGGGAGAGTGTT
TCTGAATCACCCCATGAGAAAGAGTTATCGGAAGTGGAAAAGGAAGCATGGACTTTGCTT
AGGGGAGCCGTTGTAAACTATTGTGGCTTCCCCGTTGGGACTGTGGCAGCTAATGATCCA
GCTGATATGCAGCCGCTTAACTACGATCAAGTGTTTATACGCGATTTTGTCCCATCGGCT
CTTGCTTTTTTGCTTAATGGAGAAGGGGGGATTGTCAAGAATTTTCTGCTCCACACTCTG
CAATTGCAGAGCTGGGAGAAATCTGTGGACTGCTATAACCCTGGAAAAGGATTGATGCCC
GCGAGTTTTAAAGTCAGAACTGTGCCTCTTGATGGAAGTAATGGTGAATTTAAAGATGTG
CTAGACCCAGACTTTGGTGAATCCGCAATTGGACGTGTTGCACCTGTTGATTCTGGGTTG
TGGTGGATTATCTTATTAAGAGCTTATGGAAGGATTACAGGGGACTATACTTTGCAAGAG
AGGGTGGATGTACAGACAGGCATATGTCTGATACTTCACCTGTGCTTAAGTGATGGTTTT
GACATGTTTCCTACTCTCTTGGTCACTGATGGGTCCTGCATGATTGATAGGAGGATGGGT
ATTCACGGTCATCCACTTGAGATCCAAGTAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400023171
PEP Infomation

pacid=37438231 transcript=PGSC0003DMT400034054 locus=PGSC0003DMG400013088 ID=PGSC0003DMT400034054.v4.03 annot-version=v4.03
Sequence

MNTSSCIGISTMKPCCRILSSCKGSSFIGYSFGKCNHLINDNLSNPHCKLDDIHRVSNYA
NRVIGVIGSNRSVFCGSDSNWRHARILLGFRLNKETRCYCVNANAASDVRNHSTSIEAQV
NEKIFDKFYIHGGLNVKPLVIDRKESGKDVAKVEKVRTDVNDGSGVNVKHPDNYLNGESV
SESPHEKELSEVEKEAWTLLRGAVVNYCGFPVGTVAANDPADMQPLNYDQVFIRDFVPSA
LAFLLNGEGGIVKNFLLHTLQLQSWEKSVDCYNPGKGLMPASFKVRTVPLDGSNGEFKDV
LDPDFGESAIGRVAPVDSGLWWIILLRAYGRITGDYTLQERVDVQTGICLILHLCLSDGF
DMFPTLLVTDGSCMIDRRMGIHGHPLEIQVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400034054
Transcript Infomation

pacid=37438231 locus=PGSC0003DMG400013088 ID=PGSC0003DMT400034054.v4.03 annot-version=v4.03
Sequence

ATGAATACTAGCAGTTGCATTGGTATTTCAACCATGAAACCATGTTGTAGAATCCTCAGC
AGTTGTAAAGGTTCATCCTTTATTGGTTACTCATTTGGGAAATGTAATCATTTAATTAAT
GATAATTTGTCGAATCCGCACTGCAAATTAGATGATATACATAGGGTTTCTAATTATGCT
AATAGGGTTATAGGGGTTATTGGTTCGAATCGGAGTGTTTTTTGTGGATCCGATTCGAAT
TGGAGGCATGCTAGGATTCTTTTGGGTTTTAGGTTGAATAAGGAAACTAGGTGCTACTGT
GTCAATGCAAATGCTGCATCTGATGTAAGGAATCATTCAACTTCAATTGAAGCTCAAGTG
AATGAGAAGATCTTCGATAAGTTTTACATACATGGGGGCTTAAATGTGAAGCCTTTAGTC
ATTGACAGAAAAGAATCAGGTAAAGACGTAGCTAAAGTAGAAAAAGTTAGGACAGATGTC
AATGATGGATCAGGTGTAAATGTAAAGCATCCTGATAATTATTTAAATGGGGAGAGTGTT
TCTGAATCACCCCATGAGAAAGAGTTATCGGAAGTGGAAAAGGAAGCATGGACTTTGCTT
AGGGGAGCCGTTGTAAACTATTGTGGCTTCCCCGTTGGGACTGTGGCAGCTAATGATCCA
GCTGATATGCAGCCGCTTAACTACGATCAAGTGTTTATACGCGATTTTGTCCCATCGGCT
CTTGCTTTTTTGCTTAATGGAGAAGGGGGGATTGTCAAGAATTTTCTGCTCCACACTCTG
CAATTGCAGAGCTGGGAGAAATCTGTGGACTGCTATAACCCTGGAAAAGGATTGATGCCC
GCGAGTTTTAAAGTCAGAACTGTGCCTCTTGATGGAAGTAATGGTGAATTTAAAGATGTG
CTAGACCCAGACTTTGGTGAATCCGCAATTGGACGTGTTGCACCTGTTGATTCTGGGTTG
TGGTGGATTATCTTATTAAGAGCTTATGGAAGGATTACAGGGGACTATACTTTGCAAGAG
AGGGTGGATGTACAGACAGGCATATGTCTGATACTTCACCTGTGCTTAAGTGATGGTTTT
GACATGTTTCCTACTCTCTTGGTCACTGATGGGTCCTGCATGATTGATAGGAGGATGGGT
ATTCACGGTCATCCACTTGAGATCCAAGTAAGATAA