Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033991
CDS Infomation

pacid=37436763 polypeptide=PGSC0003DMP400023139 locus=PGSC0003DMG400013067 ID=PGSC0003DMT400033991.v4.03 annot-version=v4.03
Sequence

ATGAAAGGCGGGAAGATTTTTGCATTTGGTATATCGATTATCCTGGTTGTTGGAGTAGTT
ATTGCTATTATTGCAAGCAATAATCGGACACAAGACTCTTCGGGCAATGATGAAAAGGAT
GACAAAGTGCTTTCTACCACATCCAAATCCATTGCTTCTGTTTGTTCACAAACAGATTTC
AAGAAATCATGTGTAAATTGCCTTAGCTCTATGGCCAACAACCAAAGCGCCACCCCGAAG
GAATTCCTCCAAAAAGCCATTGAGGTGGCCATTCAGGAAGTTAGAATTGGAATAGAAAGG
TCCACCTCTATCGGCAAAGCAGAGGCTCATGACTCCTTGCAAAAGATGGCCACTGATGAT
TGCAAGGAATTGCTGGAATACGCGATTGATGAGCTTCAAGCATCGTTCTCCTCTGTGGGT
GATAGCAGCGTCCACACTATCGCTGATAGGGAAACAGAACTCAAAAACTGGCTCAGTGCT
GTCTTCTCTTACCAACAAACCTGCATAGATGGTTTTACTCAACCAGAACTTCAGAAAGCC
ATTTCTACCTCCCTCTTAAATGCAACACAACTCACGGACAATGTTCTTGCAATGGTCGAT
GCAATGACTGAAATTCTTTCTAAATTTAATATTCCCATTGGAAACAAGACTGATACTACA
TCAGCAGAAACAGCAGCATCTCGGCGATTGTTAGAAAATGAAGACATTGACAAGCAGGAA
GCCAACAATACAAACAATGGATATCCTGCATGGCTTTCTAGTAGTGATAGAAAATTGTTG
GCAGCAAGCAATAACGGCAATCCATCACCAAACGTTGTGGTAGCTAAGGATGGATCTGGA
CAATTCAACACAATTGCAGCAGCTCTGGCTGCGTACCCTAAGAACCTAAAAGGAAGGTAT
ACTATATATGTGAAGGCCGGAATTTATGATGAATACATAATTGTCACAAAAGATCAAGTT
AACGTATTTATGTATGGAGATGGACCCCGAAAGACCATAGTTACAGGACACAAATCCGCA
CTTAATGGTGTGTCTACTTATCAGAGTGCTTCCTTCAGTGCCATTGGAAATGGATTTATA
GGCAAGTCCATGGGATTCCAAAACACAGCAGGACCGGAGGGGCACCAGGCGGTAGCCCTC
CGTGTTCAATCTGATATGTCTGCATTTTACAATTGTAGAATGGATGGATATCAAGACACT
TTGTATGTTCAAACACATCGACAATTTTACCGCAATTGTGTGGTGTCAGGCACAGTTGAT
TTCATCTTTGGTGACTCATCTACGATCCTCCAAAACTGCTTAATTATTGCAAGGAAGCCA
ATGGAAAAACAACAAAATACAGTGGCAGCTCAAGGTAGAACTAACATTCGGGCAACCACA
GGGCTAGTAATCCAAAATTGTCGCATTGTCCCCGAGCAATTACTAGAACCTCTGCGTTTC
AAGATTCCTACCTTCTTAGGAAGGCCATGGAAGATGTACGCAAGAACTGTGATCATGGAA
TCAACTTTGGCAGATTTCATTCAACCTGCAGGTTGGATGCCCTGGGATGGAAATTTTGCC
CTTGACACATGCCTATGTGCCGAGTACGCAAATCGTGGTCCAGGAGCCAATACCAACAAT
AGGGTCAAATGGAAGGGATTCAAAGTGATCACGGACAGGAATGAAGCACTTCAATATACA
ACAACTCCATTTATTCAAGGAAATCAGTGGGTGCAATCCACAGGTGCCCCACACTTCCTT
GGCCTGAAAAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400023139
PEP Infomation

pacid=37436763 transcript=PGSC0003DMT400033991 locus=PGSC0003DMG400013067 ID=PGSC0003DMT400033991.v4.03 annot-version=v4.03
Sequence

MKGGKIFAFGISIILVVGVVIAIIASNNRTQDSSGNDEKDDKVLSTTSKSIASVCSQTDF
KKSCVNCLSSMANNQSATPKEFLQKAIEVAIQEVRIGIERSTSIGKAEAHDSLQKMATDD
CKELLEYAIDELQASFSSVGDSSVHTIADRETELKNWLSAVFSYQQTCIDGFTQPELQKA
ISTSLLNATQLTDNVLAMVDAMTEILSKFNIPIGNKTDTTSAETAASRRLLENEDIDKQE
ANNTNNGYPAWLSSSDRKLLAASNNGNPSPNVVVAKDGSGQFNTIAAALAAYPKNLKGRY
TIYVKAGIYDEYIIVTKDQVNVFMYGDGPRKTIVTGHKSALNGVSTYQSASFSAIGNGFI
GKSMGFQNTAGPEGHQAVALRVQSDMSAFYNCRMDGYQDTLYVQTHRQFYRNCVVSGTVD
FIFGDSSTILQNCLIIARKPMEKQQNTVAAQGRTNIRATTGLVIQNCRIVPEQLLEPLRF
KIPTFLGRPWKMYARTVIMESTLADFIQPAGWMPWDGNFALDTCLCAEYANRGPGANTNN
RVKWKGFKVITDRNEALQYTTTPFIQGNQWVQSTGAPHFLGLKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400033991
Transcript Infomation

pacid=37436763 locus=PGSC0003DMG400013067 ID=PGSC0003DMT400033991.v4.03 annot-version=v4.03
Sequence

ATGAAAGGCGGGAAGATTTTTGCATTTGGTATATCGATTATCCTGGTTGTTGGAGTAGTT
ATTGCTATTATTGCAAGCAATAATCGGACACAAGACTCTTCGGGCAATGATGAAAAGGAT
GACAAAGTGCTTTCTACCACATCCAAATCCATTGCTTCTGTTTGTTCACAAACAGATTTC
AAGAAATCATGTGTAAATTGCCTTAGCTCTATGGCCAACAACCAAAGCGCCACCCCGAAG
GAATTCCTCCAAAAAGCCATTGAGGTGGCCATTCAGGAAGTTAGAATTGGAATAGAAAGG
TCCACCTCTATCGGCAAAGCAGAGGCTCATGACTCCTTGCAAAAGATGGCCACTGATGAT
TGCAAGGAATTGCTGGAATACGCGATTGATGAGCTTCAAGCATCGTTCTCCTCTGTGGGT
GATAGCAGCGTCCACACTATCGCTGATAGGGAAACAGAACTCAAAAACTGGCTCAGTGCT
GTCTTCTCTTACCAACAAACCTGCATAGATGGTTTTACTCAACCAGAACTTCAGAAAGCC
ATTTCTACCTCCCTCTTAAATGCAACACAACTCACGGACAATGTTCTTGCAATGGTCGAT
GCAATGACTGAAATTCTTTCTAAATTTAATATTCCCATTGGAAACAAGACTGATACTACA
TCAGCAGAAACAGCAGCATCTCGGCGATTGTTAGAAAATGAAGACATTGACAAGCAGGAA
GCCAACAATACAAACAATGGATATCCTGCATGGCTTTCTAGTAGTGATAGAAAATTGTTG
GCAGCAAGCAATAACGGCAATCCATCACCAAACGTTGTGGTAGCTAAGGATGGATCTGGA
CAATTCAACACAATTGCAGCAGCTCTGGCTGCGTACCCTAAGAACCTAAAAGGAAGGTAT
ACTATATATGTGAAGGCCGGAATTTATGATGAATACATAATTGTCACAAAAGATCAAGTT
AACGTATTTATGTATGGAGATGGACCCCGAAAGACCATAGTTACAGGACACAAATCCGCA
CTTAATGGTGTGTCTACTTATCAGAGTGCTTCCTTCAGTGCCATTGGAAATGGATTTATA
GGCAAGTCCATGGGATTCCAAAACACAGCAGGACCGGAGGGGCACCAGGCGGTAGCCCTC
CGTGTTCAATCTGATATGTCTGCATTTTACAATTGTAGAATGGATGGATATCAAGACACT
TTGTATGTTCAAACACATCGACAATTTTACCGCAATTGTGTGGTGTCAGGCACAGTTGAT
TTCATCTTTGGTGACTCATCTACGATCCTCCAAAACTGCTTAATTATTGCAAGGAAGCCA
ATGGAAAAACAACAAAATACAGTGGCAGCTCAAGGTAGAACTAACATTCGGGCAACCACA
GGGCTAGTAATCCAAAATTGTCGCATTGTCCCCGAGCAATTACTAGAACCTCTGCGTTTC
AAGATTCCTACCTTCTTAGGAAGGCCATGGAAGATGTACGCAAGAACTGTGATCATGGAA
TCAACTTTGGCAGATTTCATTCAACCTGCAGGTTGGATGCCCTGGGATGGAAATTTTGCC
CTTGACACATGCCTATGTGCCGAGTACGCAAATCGTGGTCCAGGAGCCAATACCAACAAT
AGGGTCAAATGGAAGGGATTCAAAGTGATCACGGACAGGAATGAAGCACTTCAATATACA
ACAACTCCATTTATTCAAGGAAATCAGTGGGTGCAATCCACAGGTGCCCCACACTTCCTT
GGCCTGAAAAACTAG