Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033828
CDS Infomation

pacid=37468232 polypeptide=PGSC0003DMP400023028 locus=PGSC0003DMG400012997 ID=PGSC0003DMT400033828.v4.03 annot-version=v4.03
Sequence

ATGACTGGTGAAAAATTAAGCTGGAAATCAATGATTCCATGTTGTTACAAAGTGGATGAT
GAATTTGTAAGATCTAAGAAACAGGTCAAGAAACAAACTTCATTCCAGAGGCTAACACTT
TTAGACTTTGATGATCCAAGTTCACCGTTATCGGCTGATGAACTCTCTAATTCATTCATT
GGATCAAGCCTTATAAACTTTACATTTACTGATCTTAGAGAGGTTACACATCATTTTTCT
TCTGCTAATTTTCTTGGTGAAGGAGGTTTTGGACCTGTGTACAAGGGATTCGTCGATGAC
AAGGTTAGACCAGGATTAAAAGCTCAGATTGTGGCTGTTAAGGTGCTGGATACAGAGGGT
CTACAAGGTCACAAGGAATGGCTGACAGAGATAATATTCCTGGGGCAATTGAGGCATCCA
CATCTGGTAAAATTGATTGGATACTGCTGGGAGGATGATAATAGGCTTTTAGTCTATGAA
TTCTTGCCAAGAGGAAGCTTGGAGAATCAAATTTTTGGAAAGTTTTCGATCACATTATCG
TGGTCAACAAGGATGAAGATAGCATTGGGAGCAGCAAAAGGTCTCGCGTTCCTCCATGAA
GGAGACAAACCAGTCATATACAGGGATTTTAAGGCCTCAAACATCTTAATAGATTCGGAT
TACACTGCTAAACTTTCTGATTTTGGACTAGCAAAGGATGGGCCAGAAGGGGATGATACT
CATGTTTCCACACGAATAATGGGAACACATGGCTATGCAGCCCCTGAATACATCATGACA
GGTCATTTGACGACAATGAGTGATGTATACAGCTTTGGAGTAGTTCTGTTGGAACTGCTG
ACAGGTAAAAGGTCTTTGGATAAGTCGAGAAGAGAAGGAGAACATAATTTAGTTGAATGG
TTAAGGCCTTATCTAAGAGATCCAAAGAGAGTTGCTCGTGTGATGGATCGAAGACTTGAA
GATGAATACCCTATGAAAGGGGCACAAACTGCAGCATTAGTAGCATACAAATGCTTAAAT
CACTATCCTAAGCCTAGGCCTACAATGGATGATGTTGTCAAGATTCTCGAAACTCTTCAA
GATGAAAACAACAACAACATCGACACTTCAATCAGTGATCCAATGATAACGATGACATTG
AGTAGTGATTTTAGCAGTGGAAGTGAGCAAAATGAGGATGCTGCAGCACCAGAAAGGAAT
AGAAATAATGAGAGAAATCAAGGTTATGGCTGGAGACATCGACTCAATAGACAGCGAATG
GTGGCATCTTACTCAGATACAGCTCTCTATCGAAGACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400023028
PEP Infomation

pacid=37468232 transcript=PGSC0003DMT400033828 locus=PGSC0003DMG400012997 ID=PGSC0003DMT400033828.v4.03 annot-version=v4.03
Sequence

MTGEKLSWKSMIPCCYKVDDEFVRSKKQVKKQTSFQRLTLLDFDDPSSPLSADELSNSFI
GSSLINFTFTDLREVTHHFSSANFLGEGGFGPVYKGFVDDKVRPGLKAQIVAVKVLDTEG
LQGHKEWLTEIIFLGQLRHPHLVKLIGYCWEDDNRLLVYEFLPRGSLENQIFGKFSITLS
WSTRMKIALGAAKGLAFLHEGDKPVIYRDFKASNILIDSDYTAKLSDFGLAKDGPEGDDT
HVSTRIMGTHGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKRSLDKSRREGEHNLVEW
LRPYLRDPKRVARVMDRRLEDEYPMKGAQTAALVAYKCLNHYPKPRPTMDDVVKILETLQ
DENNNNIDTSISDPMITMTLSSDFSSGSEQNEDAAAPERNRNNERNQGYGWRHRLNRQRM
VASYSDTALYRRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400033828
Transcript Infomation

pacid=37468232 locus=PGSC0003DMG400012997 ID=PGSC0003DMT400033828.v4.03 annot-version=v4.03
Sequence

ATGACTGGTGAAAAATTAAGCTGGAAATCAATGATTCCATGTTGTTACAAAGTGGATGAT
GAATTTGTAAGATCTAAGAAACAGGTCAAGAAACAAACTTCATTCCAGAGGCTAACACTT
TTAGACTTTGATGATCCAAGTTCACCGTTATCGGCTGATGAACTCTCTAATTCATTCATT
GGATCAAGCCTTATAAACTTTACATTTACTGATCTTAGAGAGGTTACACATCATTTTTCT
TCTGCTAATTTTCTTGGTGAAGGAGGTTTTGGACCTGTGTACAAGGGATTCGTCGATGAC
AAGGTTAGACCAGGATTAAAAGCTCAGATTGTGGCTGTTAAGGTGCTGGATACAGAGGGT
CTACAAGGTCACAAGGAATGGCTGACAGAGATAATATTCCTGGGGCAATTGAGGCATCCA
CATCTGGTAAAATTGATTGGATACTGCTGGGAGGATGATAATAGGCTTTTAGTCTATGAA
TTCTTGCCAAGAGGAAGCTTGGAGAATCAAATTTTTGGAAAGTTTTCGATCACATTATCG
TGGTCAACAAGGATGAAGATAGCATTGGGAGCAGCAAAAGGTCTCGCGTTCCTCCATGAA
GGAGACAAACCAGTCATATACAGGGATTTTAAGGCCTCAAACATCTTAATAGATTCGGAT
TACACTGCTAAACTTTCTGATTTTGGACTAGCAAAGGATGGGCCAGAAGGGGATGATACT
CATGTTTCCACACGAATAATGGGAACACATGGCTATGCAGCCCCTGAATACATCATGACA
GGTCATTTGACGACAATGAGTGATGTATACAGCTTTGGAGTAGTTCTGTTGGAACTGCTG
ACAGGTAAAAGGTCTTTGGATAAGTCGAGAAGAGAAGGAGAACATAATTTAGTTGAATGG
TTAAGGCCTTATCTAAGAGATCCAAAGAGAGTTGCTCGTGTGATGGATCGAAGACTTGAA
GATGAATACCCTATGAAAGGGGCACAAACTGCAGCATTAGTAGCATACAAATGCTTAAAT
CACTATCCTAAGCCTAGGCCTACAATGGATGATGTTGTCAAGATTCTCGAAACTCTTCAA
GATGAAAACAACAACAACATCGACACTTCAATCAGTGATCCAATGATAACGATGACATTG
AGTAGTGATTTTAGCAGTGGAAGTGAGCAAAATGAGGATGCTGCAGCACCAGAAAGGAAT
AGAAATAATGAGAGAAATCAAGGTTATGGCTGGAGACATCGACTCAATAGACAGCGAATG
GTGGCATCTTACTCAGATACAGCTCTCTATCGAAGACATTGA