Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033827
CDS Infomation

pacid=37468490 polypeptide=PGSC0003DMP400023027 locus=PGSC0003DMG402012996 ID=PGSC0003DMT400033827.v4.03 annot-version=v4.03
Sequence

ATGGCAACTGTAAAAGCAGTGATGGGGAATTTGACGGTGGCAGAACGACAAGTACTCACG
GCAGTGAACAGCGGAGCATCAAGTCTCTCATTCGTCGGTTCAGGATTTATAGTACTCTGT
TATTTGCTTTTCAAAGAGCTTCGCAAGTTCTCCTTCAAACTTGTCTTCTACCTCGCTTTA
TCTGACATGTGCTGCAGTTTCTTCAGCATAATTGGGGATCCTTCCAAAGGGTACTTCTGT
TATGCTCAGGGATATACAACACATTTCTTCTGCCTAGCGTCTTTCTTGTGGACAACAACA
ATTGCCTTTACTCTTCACCGAACAGTTGTTAGACATAAGACGGATGTTGAAGATTTGGAG
CCAATGTTTCATTTATATGTTTGGGGAACTTCAGGAGTAATGACAGTTATAAGATCAATT
GCCAATAATCATGAACATCTAAGTCGGCTGGGCACTTGGTGTTGGGCACAAACAGGACAC
ACAGGAAAGGTGGTACACTTCATAACGTTTTATGCACCTCTTTGGGGTGCCATTCTTTTT
AACGGTGTCACCTATTTTCAAGTGATACGGATGCTAAACAATGCAACTCGTATGGCAGTG
GGCATGTCAGAGAGGTCATACCAACCAGATCCACGGTCAGACATGAAGGCACTAAATCGT
TGGGGTTACTATCCCCTTATTCTTATTGGATCATGGTTTTTCGGTACAATCAACCGTATA
CATGACGTTATTGAACCAGGTCATAAGATCTTTTGGCTTTCTGTTCTTGATGTTGGAATG
GCACAGCTCATGGGTCTCTTCAACTCAATAGCATACGGCCTTAACAGCTCAGTCCGTAGA
GCAATTTACGAGAGATTGGATCTGTTACCTGAATGGTCTCAAAGATGGCTTCCAAAGAGC
TCAAAGTCAAGAGGCCAACAGCAAGACAGTGAATTAGTCTCTCTAAAGATTCAAGATCAG
CAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400023027
PEP Infomation

pacid=37468490 transcript=PGSC0003DMT400033827 locus=PGSC0003DMG402012996 ID=PGSC0003DMT400033827.v4.03 annot-version=v4.03
Sequence

MATVKAVMGNLTVAERQVLTAVNSGASSLSFVGSGFIVLCYLLFKELRKFSFKLVFYLAL
SDMCCSFFSIIGDPSKGYFCYAQGYTTHFFCLASFLWTTTIAFTLHRTVVRHKTDVEDLE
PMFHLYVWGTSGVMTVIRSIANNHEHLSRLGTWCWAQTGHTGKVVHFITFYAPLWGAILF
NGVTYFQVIRMLNNATRMAVGMSERSYQPDPRSDMKALNRWGYYPLILIGSWFFGTINRI
HDVIEPGHKIFWLSVLDVGMAQLMGLFNSIAYGLNSSVRRAIYERLDLLPEWSQRWLPKS
SKSRGQQQDSELVSLKIQDQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400033827
Transcript Infomation

pacid=37468490 locus=PGSC0003DMG402012996 ID=PGSC0003DMT400033827.v4.03 annot-version=v4.03
Sequence

ATGGCAACTGTAAAAGCAGTGATGGGGAATTTGACGGTGGCAGAACGACAAGTACTCACG
GCAGTGAACAGCGGAGCATCAAGTCTCTCATTCGTCGGTTCAGGATTTATAGTACTCTGT
TATTTGCTTTTCAAAGAGCTTCGCAAGTTCTCCTTCAAACTTGTCTTCTACCTCGCTTTA
TCTGACATGTGCTGCAGTTTCTTCAGCATAATTGGGGATCCTTCCAAAGGGTACTTCTGT
TATGCTCAGGGATATACAACACATTTCTTCTGCCTAGCGTCTTTCTTGTGGACAACAACA
ATTGCCTTTACTCTTCACCGAACAGTTGTTAGACATAAGACGGATGTTGAAGATTTGGAG
CCAATGTTTCATTTATATGTTTGGGGAACTTCAGGAGTAATGACAGTTATAAGATCAATT
GCCAATAATCATGAACATCTAAGTCGGCTGGGCACTTGGTGTTGGGCACAAACAGGACAC
ACAGGAAAGGTGGTACACTTCATAACGTTTTATGCACCTCTTTGGGGTGCCATTCTTTTT
AACGGTGTCACCTATTTTCAAGTGATACGGATGCTAAACAATGCAACTCGTATGGCAGTG
GGCATGTCAGAGAGGTCATACCAACCAGATCCACGGTCAGACATGAAGGCACTAAATCGT
TGGGGTTACTATCCCCTTATTCTTATTGGATCATGGTTTTTCGGTACAATCAACCGTATA
CATGACGTTATTGAACCAGGTCATAAGATCTTTTGGCTTTCTGTTCTTGATGTTGGAATG
GCACAGCTCATGGGTCTCTTCAACTCAATAGCATACGGCCTTAACAGCTCAGTCCGTAGA
GCAATTTACGAGAGATTGGATCTGTTACCTGAATGGTCTCAAAGATGGCTTCCAAAGAGC
TCAAAGTCAAGAGGCCAACAGCAAGACAGTGAATTAGTCTCTCTAAAGATTCAAGATCAG
CAATAA