Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033805
CDS Infomation

pacid=37457975 polypeptide=PGSC0003DMP400023010 locus=PGSC0003DMG400012989 ID=PGSC0003DMT400033805.v4.03 annot-version=v4.03
Sequence

ATGTCTGGCATGAAGTTGTTGACTGTTGTTTTGGTGGTGGCTGCCGCCGCCGCCTCCGTG
GTGGACGCCGGAGCTGAGAAATTGCCGGCGGGGGTGCTTAGTTTGGAGAGGATTTTTCCG
GTGAATGGGAAAGTGGAGCTGGAGGAACTTAGAGCTAGGGATAAAGCTAGACATGCTCGA
ATGTTGCAGAGTTTTGGTGGTGGCATTGTTGATTTTCCTGTTGTCGGTTCCTCTGACCCT
TATCTCGTCGGCCTTTATTTTACAAAAGTGAGACTGGGAACTCCGCCAAGAGAATATAAT
GTGCAGATTGATACTGGCAGTGATATCCTGTGGGTCACCTGCAGTTCCTGTGACGATTGT
CCTCGAACAAGTGGACTTGGGGTTGAACTCAACTTCTATGATGCTACAGTCTCATCAACT
GCTTCTCCCATTTCTTGTGCGGACCAAGTGTGCGCCTCTATAGTTCAAACTACCTCTGCT
GAGTGCTCTACAGAAACCAACCAGTGTGGTTACACCTTTCAGTATGGAGATGGGAGTGGC
ACAACTGGTCATTACGTAGCCGATTTATTATATTTCGATACAGTCCTGGGAACCTCGTTG
ATTGCCAACTCTTCAGCACCAATTGTTTTTGGGTGCAGCACCTCTCAGTCTGGGGACTTG
ACCAAGACGGACAGAGCAATTGATGGGATTTTTGGGTTTGGTCAACAGGGACTTTCAGTA
ATATCTCAATTGTCTTCTCGTGGGATTACTCCTAAAGTATTTTCACATTGCTTGAAAGGA
GAGGGAAATGGTGGAGGTATACTAGTCCTTGGTGAGATTTTGGATCCGAGAATCGTATAT
AGTCCCCTTGTTCCATCACAAGCGCATTACAATGTATATCTGCAGAGCATTGCTGTTAAT
GGACAGTTGGTGCCTGTTGATCCATCAGTGTTTGCGACATCTGGCAATCGAGGAACTATT
GTGGATTCTGGTACAACTTTGTCTTATATTGCCGCAGAAGCTTATGATCCCTTTGTCAGT
GCTATAGCTGCTGCTGTTTCACAATCAACTAGGCCAATCATCTCACGAACGAAACCATGC
TTTCTAGTGTCCTCAAGCATAGCTGAGATATTTCCCCCAGTTTCTTTGAACTTCGATGGT
GGCGCATCAATGGCTTTAAGACCAGCAGACTACCTTGTGCATATGGGCTTTGTTGAAGGC
GCTGCTATGTGGTGCATTGGCTTTGAAAAACAAGATCAAGGTGTAACAATTTTAGGAGAC
CTTGTTCTGAAAGACAAAATCATTGTATATGACTTGGCTCGGCAAAGGATTGGATGGACA
GATTATGATTGTTCCTCATCTGTGAATGTATCCATAACCTCTGGCAAGGGTGAATTTATC
AACGCTGGACAGTTGAGCGTGAATGGTGCATCAGGCTGTGCGATGTTCAGTCTGCAGCAC
ACGAGAGCTAGTGCTCTTCTGCTACTATTGGTCCTTATGATTGGTTCCCCATTTTTAACT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400023010
PEP Infomation

pacid=37457975 transcript=PGSC0003DMT400033805 locus=PGSC0003DMG400012989 ID=PGSC0003DMT400033805.v4.03 annot-version=v4.03
Sequence

MSGMKLLTVVLVVAAAAASVVDAGAEKLPAGVLSLERIFPVNGKVELEELRARDKARHAR
MLQSFGGGIVDFPVVGSSDPYLVGLYFTKVRLGTPPREYNVQIDTGSDILWVTCSSCDDC
PRTSGLGVELNFYDATVSSTASPISCADQVCASIVQTTSAECSTETNQCGYTFQYGDGSG
TTGHYVADLLYFDTVLGTSLIANSSAPIVFGCSTSQSGDLTKTDRAIDGIFGFGQQGLSV
ISQLSSRGITPKVFSHCLKGEGNGGGILVLGEILDPRIVYSPLVPSQAHYNVYLQSIAVN
GQLVPVDPSVFATSGNRGTIVDSGTTLSYIAAEAYDPFVSAIAAAVSQSTRPIISRTKPC
FLVSSSIAEIFPPVSLNFDGGASMALRPADYLVHMGFVEGAAMWCIGFEKQDQGVTILGD
LVLKDKIIVYDLARQRIGWTDYDCSSSVNVSITSGKGEFINAGQLSVNGASGCAMFSLQH
TRASALLLLLVLMIGSPFLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400033805
Transcript Infomation

pacid=37457975 locus=PGSC0003DMG400012989 ID=PGSC0003DMT400033805.v4.03 annot-version=v4.03
Sequence

ATGTCTGGCATGAAGTTGTTGACTGTTGTTTTGGTGGTGGCTGCCGCCGCCGCCTCCGTG
GTGGACGCCGGAGCTGAGAAATTGCCGGCGGGGGTGCTTAGTTTGGAGAGGATTTTTCCG
GTGAATGGGAAAGTGGAGCTGGAGGAACTTAGAGCTAGGGATAAAGCTAGACATGCTCGA
ATGTTGCAGAGTTTTGGTGGTGGCATTGTTGATTTTCCTGTTGTCGGTTCCTCTGACCCT
TATCTCGTCGGCCTTTATTTTACAAAAGTGAGACTGGGAACTCCGCCAAGAGAATATAAT
GTGCAGATTGATACTGGCAGTGATATCCTGTGGGTCACCTGCAGTTCCTGTGACGATTGT
CCTCGAACAAGTGGACTTGGGGTTGAACTCAACTTCTATGATGCTACAGTCTCATCAACT
GCTTCTCCCATTTCTTGTGCGGACCAAGTGTGCGCCTCTATAGTTCAAACTACCTCTGCT
GAGTGCTCTACAGAAACCAACCAGTGTGGTTACACCTTTCAGTATGGAGATGGGAGTGGC
ACAACTGGTCATTACGTAGCCGATTTATTATATTTCGATACAGTCCTGGGAACCTCGTTG
ATTGCCAACTCTTCAGCACCAATTGTTTTTGGGTGCAGCACCTCTCAGTCTGGGGACTTG
ACCAAGACGGACAGAGCAATTGATGGGATTTTTGGGTTTGGTCAACAGGGACTTTCAGTA
ATATCTCAATTGTCTTCTCGTGGGATTACTCCTAAAGTATTTTCACATTGCTTGAAAGGA
GAGGGAAATGGTGGAGGTATACTAGTCCTTGGTGAGATTTTGGATCCGAGAATCGTATAT
AGTCCCCTTGTTCCATCACAAGCGCATTACAATGTATATCTGCAGAGCATTGCTGTTAAT
GGACAGTTGGTGCCTGTTGATCCATCAGTGTTTGCGACATCTGGCAATCGAGGAACTATT
GTGGATTCTGGTACAACTTTGTCTTATATTGCCGCAGAAGCTTATGATCCCTTTGTCAGT
GCTATAGCTGCTGCTGTTTCACAATCAACTAGGCCAATCATCTCACGAACGAAACCATGC
TTTCTAGTGTCCTCAAGCATAGCTGAGATATTTCCCCCAGTTTCTTTGAACTTCGATGGT
GGCGCATCAATGGCTTTAAGACCAGCAGACTACCTTGTGCATATGGGCTTTGTTGAAGGC
GCTGCTATGTGGTGCATTGGCTTTGAAAAACAAGATCAAGGTGTAACAATTTTAGGAGAC
CTTGTTCTGAAAGACAAAATCATTGTATATGACTTGGCTCGGCAAAGGATTGGATGGACA
GATTATGATTGTTCCTCATCTGTGAATGTATCCATAACCTCTGGCAAGGGTGAATTTATC
AACGCTGGACAGTTGAGCGTGAATGGTGCATCAGGCTGTGCGATGTTCAGTCTGCAGCAC
ACGAGAGCTAGTGCTCTTCTGCTACTATTGGTCCTTATGATTGGTTCCCCATTTTTAACT
TAA