Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033802
CDS Infomation

pacid=37455740 polypeptide=PGSC0003DMP400023007 locus=PGSC0003DMG400012988 ID=PGSC0003DMT400033802.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGCTATACGTCGGCGACCTTCACGACTCTGTGACCGACGGGCAACTCTACGAA
GCATTCTCAGAGTTCAAAAACCTCGTTGACGTTCGCGTCTGTCGCGACTCTTCTACCGGC
CGTTCCCTCTGTTACGGCTACGTTAACTTCATTTCTTCTGAAGACGCTGTGCGTGCTATT
GAGGTGAAAAATCATTCCACCCTCAATGGAAAAGCTATAAGGGTTAGTTGGTCCCGTCGT
GATTCTGTTGTGAGAAGAAGTGGAACTGGAAATGTATTCATCAAGAATCTAAATGATGTA
ATTGACAGCACGAAGCTTGAAGAAATATTCCAGAAGTTCGGAAATATCTTATCCTGTAAA
GTTGCTGTTTCTGAGGATGGAAGGAGTAAAGGATTTGGCTTTGTCCAGTTTGAGACTGAG
GACAGTGCAAACACTGCTATTGAGGAGCTCAATGGATCTGCTGTTGGAGGAAAGGAGATG
TATGTAGGAAAGTTCGTCAAAAAGAGTGACCGGATTCTGCCCAGCCCTGATGAAAAATAT
ACAAATTTGTTCATCAAGAACCTGGGTCTTGACATCTCAGAAGAGCATCTTAGAGAGAAG
TTCTCTGAATTTGGGAAAATTATCAGCTTGGTCATTTCGAAAGATGAGAATGGATGTTCA
AAAGGTTTTGGTTACGTGAACTTTGAGAATCCAGATGATGCTAGGAGAGCAAGGGAAGCT
ATGAATGGATCAAAACTTGGCTGCAAGATCTTGTATGTAGCAAGAGCACAAAAGAAAACA
GAACGCGAACAGATATTGAGGCGTTTGTTTGAGGAGAGAAGGAAGGCGCGACTTATTAAG
TACCAGGGTTCAAATGTGTACGTCAAAAATATCGATGGTGATGTCAAGGATCACGAGTTG
CGTGAATTGTTCAGTCAATGTGGCAAAATCACTTCTGCAAAACTTATGCTAGATGAAAAA
GGAGTCAGCAGGGGCTTTGGATTTGTATGTTTTTCCAGACCAGAGGAGGCCAATAAAGCG
GTGAATACTTTTCATGGATTTATGTTTGGCCAAAAGCCATTGTATGTGGCTATTGCTCAA
AGGAAAGAGGAAAGGCAAACTCAATTACTGCTTAAGCATGCACAAGGAATTGCAGGTCTC
ACCAGATCTTCCGCTTTTTTCCCTGGTGGATATCCCCCTCTGTACTATCCTGCCCTTGGT
GATCTACAAGTATCTGAACAACCAGGGCTGCTGTATCAGCCTCTGAGTATGAGGCATGGT
TGGATGGTCAATGGATTTGCAAACTCTATTAGACCTTCTTATCAAACTTCCTTGATTCCT
AGTGCTTCACAATATAGGCAGAATAGGGGAAAGAAGAACGGACATATGCCAGTTCCAGAT
GTCCCTTACTGGCAGCAATCAGTCCAATCAGTGGCATCATCAAAACAATCTAGCTATACT
CAAAAGGTCAAATATGCACCAAATGGTTGTGGTATGAAGAAAGGATGTGTTTTCTCTCCT
GGCACCAGTACAAAAGGATCATTGTCTGAGGTTTCAGACAACCTGAGTACCATGCTTACT
GCTGCACCTCCTAAGCAGCAGAAACAGATACTTGGAGACCACCTTTATCCTCTTATTAGT
CAACACAAGCCCCATCTTGCTGCAAAGGTTACAGGAATGCTCTTGGAAATGGACAACTCA
GAGCTTTTATCATTGTTCAAGTCACCAGAATCTCTGGCAGCAATGGTGCAAAAAGCAGTT
GAGATGCTCAACCTCCCCAAGACTGAAGTTTCCCCTCGAGATTCATGTCTTCCAAATCTT
CTCTCTGCTAAGTTGCAGTCAACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400023007
PEP Infomation

pacid=37455740 transcript=PGSC0003DMT400033802 locus=PGSC0003DMG400012988 ID=PGSC0003DMT400033802.v4.03 annot-version=v4.03
Sequence

MASLYVGDLHDSVTDGQLYEAFSEFKNLVDVRVCRDSSTGRSLCYGYVNFISSEDAVRAI
EVKNHSTLNGKAIRVSWSRRDSVVRRSGTGNVFIKNLNDVIDSTKLEEIFQKFGNILSCK
VAVSEDGRSKGFGFVQFETEDSANTAIEELNGSAVGGKEMYVGKFVKKSDRILPSPDEKY
TNLFIKNLGLDISEEHLREKFSEFGKIISLVISKDENGCSKGFGYVNFENPDDARRAREA
MNGSKLGCKILYVARAQKKTEREQILRRLFEERRKARLIKYQGSNVYVKNIDGDVKDHEL
RELFSQCGKITSAKLMLDEKGVSRGFGFVCFSRPEEANKAVNTFHGFMFGQKPLYVAIAQ
RKEERQTQLLLKHAQGIAGLTRSSAFFPGGYPPLYYPALGDLQVSEQPGLLYQPLSMRHG
WMVNGFANSIRPSYQTSLIPSASQYRQNRGKKNGHMPVPDVPYWQQSVQSVASSKQSSYT
QKVKYAPNGCGMKKGCVFSPGTSTKGSLSEVSDNLSTMLTAAPPKQQKQILGDHLYPLIS
QHKPHLAAKVTGMLLEMDNSELLSLFKSPESLAAMVQKAVEMLNLPKTEVSPRDSCLPNL
LSAKLQST*

Transcript Sequence

Transcript ID

PGSC0003DMT400033802
Transcript Infomation

pacid=37455740 locus=PGSC0003DMG400012988 ID=PGSC0003DMT400033802.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGCTATACGTCGGCGACCTTCACGACTCTGTGACCGACGGGCAACTCTACGAA
GCATTCTCAGAGTTCAAAAACCTCGTTGACGTTCGCGTCTGTCGCGACTCTTCTACCGGC
CGTTCCCTCTGTTACGGCTACGTTAACTTCATTTCTTCTGAAGACGCTGTGCGTGCTATT
GAGGTGAAAAATCATTCCACCCTCAATGGAAAAGCTATAAGGGTTAGTTGGTCCCGTCGT
GATTCTGTTGTGAGAAGAAGTGGAACTGGAAATGTATTCATCAAGAATCTAAATGATGTA
ATTGACAGCACGAAGCTTGAAGAAATATTCCAGAAGTTCGGAAATATCTTATCCTGTAAA
GTTGCTGTTTCTGAGGATGGAAGGAGTAAAGGATTTGGCTTTGTCCAGTTTGAGACTGAG
GACAGTGCAAACACTGCTATTGAGGAGCTCAATGGATCTGCTGTTGGAGGAAAGGAGATG
TATGTAGGAAAGTTCGTCAAAAAGAGTGACCGGATTCTGCCCAGCCCTGATGAAAAATAT
ACAAATTTGTTCATCAAGAACCTGGGTCTTGACATCTCAGAAGAGCATCTTAGAGAGAAG
TTCTCTGAATTTGGGAAAATTATCAGCTTGGTCATTTCGAAAGATGAGAATGGATGTTCA
AAAGGTTTTGGTTACGTGAACTTTGAGAATCCAGATGATGCTAGGAGAGCAAGGGAAGCT
ATGAATGGATCAAAACTTGGCTGCAAGATCTTGTATGTAGCAAGAGCACAAAAGAAAACA
GAACGCGAACAGATATTGAGGCGTTTGTTTGAGGAGAGAAGGAAGGCGCGACTTATTAAG
TACCAGGGTTCAAATGTGTACGTCAAAAATATCGATGGTGATGTCAAGGATCACGAGTTG
CGTGAATTGTTCAGTCAATGTGGCAAAATCACTTCTGCAAAACTTATGCTAGATGAAAAA
GGAGTCAGCAGGGGCTTTGGATTTGTATGTTTTTCCAGACCAGAGGAGGCCAATAAAGCG
GTGAATACTTTTCATGGATTTATGTTTGGCCAAAAGCCATTGTATGTGGCTATTGCTCAA
AGGAAAGAGGAAAGGCAAACTCAATTACTGCTTAAGCATGCACAAGGAATTGCAGGTCTC
ACCAGATCTTCCGCTTTTTTCCCTGGTGGATATCCCCCTCTGTACTATCCTGCCCTTGGT
GATCTACAAGTATCTGAACAACCAGGGCTGCTGTATCAGCCTCTGAGTATGAGGCATGGT
TGGATGGTCAATGGATTTGCAAACTCTATTAGACCTTCTTATCAAACTTCCTTGATTCCT
AGTGCTTCACAATATAGGCAGAATAGGGGAAAGAAGAACGGACATATGCCAGTTCCAGAT
GTCCCTTACTGGCAGCAATCAGTCCAATCAGTGGCATCATCAAAACAATCTAGCTATACT
CAAAAGGTCAAATATGCACCAAATGGTTGTGGTATGAAGAAAGGATGTGTTTTCTCTCCT
GGCACCAGTACAAAAGGATCATTGTCTGAGGTTTCAGACAACCTGAGTACCATGCTTACT
GCTGCACCTCCTAAGCAGCAGAAACAGATACTTGGAGACCACCTTTATCCTCTTATTAGT
CAACACAAGCCCCATCTTGCTGCAAAGGTTACAGGAATGCTCTTGGAAATGGACAACTCA
GAGCTTTTATCATTGTTCAAGTCACCAGAATCTCTGGCAGCAATGGTGCAAAAAGCAGTT
GAGATGCTCAACCTCCCCAAGACTGAAGTTTCCCCTCGAGATTCATGTCTTCCAAATCTT
CTCTCTGCTAAGTTGCAGTCAACTTAG