Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033789
CDS Infomation

pacid=37454935 polypeptide=PGSC0003DMP400022995 locus=PGSC0003DMG402012981 ID=PGSC0003DMT400033789.v4.03 annot-version=v4.03
Sequence

ATGACCATGACTATTCTTTACAGGAGGAAAACTAACCTGTATGTCTTACTGTTACTCCAC
TTCTTTTGTTACTCTTGTTCCCAAAAGACATGTCCAAACTGTGGTTCTCTAGAGGTTCCA
TATCCCTTGAGCACGAATCCCAACTGTGGCAACCCTGACTATTCTATCCGTTGTGATCCT
CACTCTCACAAGCTCTATCTTGATACCCTTAATGGAAGCTCTTATGTCATCCTCAGAATT
ATGGCCTCGTTCCAGCGTATGGTGGTGCAATCATCACCCTGGATGCCTGGTACCTGTGTT
ACACAAGACATGTCAGTGAGTGAGGGACTGTGGTTGAACCAGACTCTTCCGTTTAACGTT
ACTTCTTCTAACACTATCTTCTTATTTAATTGTTCTCCTCGTCTTCTAGTATCCCCTTTA
AATTGCACACCTTCTAGCTTGTGCCATAAATATCTGCTTAGCTCTGGACATGTAGATGCT
AAAAGGGAACTTCAGTGTGCAAGTGGTGTTTATCCATGTTGCACATTTATTGCTGGCGGT
ATGCCCTCAGCATACAAGATACGCCTGCATATCTCGGGTTGCCAAGCATTTAGAAGCATT
CTACACTTGGATGCTATGAAGCCAGCTAATGAATGGGAGGAGGGATTGGAAATTCAATGG
TCTCCTCCACCCGAGCCACACTGTAAATCACAATCTGATTGCTCTGGAGCTTCTACATGT
TCACCTTCTGGTAAAAACAGTGTCTTTCGCTGTTTTTGCAATCGTGACTATTATTGGAAC
AGAAGTCAAGGAAATTGCATGAAGAAGAAACACTCTGGTTTTGTATTAAATATATCTATT
GGGATTGCCTTGTTTTTGGCTTTTGCTGTTGTGGTGATTGCAGTGGCTTTGAAAAGATCA
GGAAGAGTCTCAGCCAGGGCTAGGCTTGCTAAGGCAAGAGAAGACATTCTAAAATCAAAC
AATGGTGGAAAACCGGCCAGGATGTTTTGTCTTAAGGAGATGAAGAAAGCTACAAATGGA
TTCTCAAAAGACAGAATCTTGGGCCATGGTGGTTTCGGAGAAGTTTATAAAGGCGAGTTT
CAGGATGGAACGATTGTAGCAGTAAAGTTAGCCAAAGTGGGAAATGTCAAGAGCACTCAA
CAAGTACTCAATGAAGTTGGGATCCTTTCTCAAGTCAATCACAGGAACCTGGTCAAGCTT
TTAGGGTGCTGCATAGAAGCTGAACAGCCTTTGATGATTTACGAATACATTTCCAACGGA
ACCCTCCACGATCATCTTCATGGTAAGTACTCCACCTTTCTTGACTGGAAAACAAGGTTG
AAAATTGCTTCACAAACTGCAGAAGCATTGGCTTATCTTCACTCAGCTGCTTACCCTCCC
ATCTACCATAGAGATGTCAAATCTACAAACATACTCCTGGATAACGAATTCAATGCCAAA
GTTTCCGACTTTGGGATATCAAGATTGGCTTGTCCAGGGTTGAGTCATGTGTCCACTTGT
GCTCAGGGTACATTAGGTTACTTGGACCCTGAATATTTTCGCAACTATCAGCTAACCGAT
AAAAGTGATGTTTACAGCTTCGGGGTTGTGTTACTAGAACTTCTTACTTCTCAGAAGGCA
GTTGACTTCTCTCGAGACGAAAATAGTGTCAACTTGGTTTCTTATGTCATTCAGCAAGAA
AACCATGGTTCAGTTATGGATGTAGTGGACAGGCGCTTGCTTGGGGAGGAGCCTTTGACT
AATGTAACTACTGGTATGGACTCGTTCTTGGCGCTTGCACTTTCGTGTTTAAGAGAAACG
AAGACAGAGAGACCCTGCATGAAAGATGTTGTTCAGCAACTTCACTGCATAAGTGAAATA
GTTGATCAAGAAGAGCCTATTGAGGTTAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022995
PEP Infomation

pacid=37454935 transcript=PGSC0003DMT400033789 locus=PGSC0003DMG402012981 ID=PGSC0003DMT400033789.v4.03 annot-version=v4.03
Sequence

MTMTILYRRKTNLYVLLLLHFFCYSCSQKTCPNCGSLEVPYPLSTNPNCGNPDYSIRCDP
HSHKLYLDTLNGSSYVILRIMASFQRMVVQSSPWMPGTCVTQDMSVSEGLWLNQTLPFNV
TSSNTIFLFNCSPRLLVSPLNCTPSSLCHKYLLSSGHVDAKRELQCASGVYPCCTFIAGG
MPSAYKIRLHISGCQAFRSILHLDAMKPANEWEEGLEIQWSPPPEPHCKSQSDCSGASTC
SPSGKNSVFRCFCNRDYYWNRSQGNCMKKKHSGFVLNISIGIALFLAFAVVVIAVALKRS
GRVSARARLAKAREDILKSNNGGKPARMFCLKEMKKATNGFSKDRILGHGGFGEVYKGEF
QDGTIVAVKLAKVGNVKSTQQVLNEVGILSQVNHRNLVKLLGCCIEAEQPLMIYEYISNG
TLHDHLHGKYSTFLDWKTRLKIASQTAEALAYLHSAAYPPIYHRDVKSTNILLDNEFNAK
VSDFGISRLACPGLSHVSTCAQGTLGYLDPEYFRNYQLTDKSDVYSFGVVLLELLTSQKA
VDFSRDENSVNLVSYVIQQENHGSVMDVVDRRLLGEEPLTNVTTGMDSFLALALSCLRET
KTERPCMKDVVQQLHCISEIVDQEEPIEVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400033789
Transcript Infomation

pacid=37454935 locus=PGSC0003DMG402012981 ID=PGSC0003DMT400033789.v4.03 annot-version=v4.03
Sequence

ATGACCATGACTATTCTTTACAGGAGGAAAACTAACCTGTATGTCTTACTGTTACTCCAC
TTCTTTTGTTACTCTTGTTCCCAAAAGACATGTCCAAACTGTGGTTCTCTAGAGGTTCCA
TATCCCTTGAGCACGAATCCCAACTGTGGCAACCCTGACTATTCTATCCGTTGTGATCCT
CACTCTCACAAGCTCTATCTTGATACCCTTAATGGAAGCTCTTATGTCATCCTCAGAATT
ATGGCCTCGTTCCAGCGTATGGTGGTGCAATCATCACCCTGGATGCCTGGTACCTGTGTT
ACACAAGACATGTCAGTGAGTGAGGGACTGTGGTTGAACCAGACTCTTCCGTTTAACGTT
ACTTCTTCTAACACTATCTTCTTATTTAATTGTTCTCCTCGTCTTCTAGTATCCCCTTTA
AATTGCACACCTTCTAGCTTGTGCCATAAATATCTGCTTAGCTCTGGACATGTAGATGCT
AAAAGGGAACTTCAGTGTGCAAGTGGTGTTTATCCATGTTGCACATTTATTGCTGGCGGT
ATGCCCTCAGCATACAAGATACGCCTGCATATCTCGGGTTGCCAAGCATTTAGAAGCATT
CTACACTTGGATGCTATGAAGCCAGCTAATGAATGGGAGGAGGGATTGGAAATTCAATGG
TCTCCTCCACCCGAGCCACACTGTAAATCACAATCTGATTGCTCTGGAGCTTCTACATGT
TCACCTTCTGGTAAAAACAGTGTCTTTCGCTGTTTTTGCAATCGTGACTATTATTGGAAC
AGAAGTCAAGGAAATTGCATGAAGAAGAAACACTCTGGTTTTGTATTAAATATATCTATT
GGGATTGCCTTGTTTTTGGCTTTTGCTGTTGTGGTGATTGCAGTGGCTTTGAAAAGATCA
GGAAGAGTCTCAGCCAGGGCTAGGCTTGCTAAGGCAAGAGAAGACATTCTAAAATCAAAC
AATGGTGGAAAACCGGCCAGGATGTTTTGTCTTAAGGAGATGAAGAAAGCTACAAATGGA
TTCTCAAAAGACAGAATCTTGGGCCATGGTGGTTTCGGAGAAGTTTATAAAGGCGAGTTT
CAGGATGGAACGATTGTAGCAGTAAAGTTAGCCAAAGTGGGAAATGTCAAGAGCACTCAA
CAAGTACTCAATGAAGTTGGGATCCTTTCTCAAGTCAATCACAGGAACCTGGTCAAGCTT
TTAGGGTGCTGCATAGAAGCTGAACAGCCTTTGATGATTTACGAATACATTTCCAACGGA
ACCCTCCACGATCATCTTCATGGTAAGTACTCCACCTTTCTTGACTGGAAAACAAGGTTG
AAAATTGCTTCACAAACTGCAGAAGCATTGGCTTATCTTCACTCAGCTGCTTACCCTCCC
ATCTACCATAGAGATGTCAAATCTACAAACATACTCCTGGATAACGAATTCAATGCCAAA
GTTTCCGACTTTGGGATATCAAGATTGGCTTGTCCAGGGTTGAGTCATGTGTCCACTTGT
GCTCAGGGTACATTAGGTTACTTGGACCCTGAATATTTTCGCAACTATCAGCTAACCGAT
AAAAGTGATGTTTACAGCTTCGGGGTTGTGTTACTAGAACTTCTTACTTCTCAGAAGGCA
GTTGACTTCTCTCGAGACGAAAATAGTGTCAACTTGGTTTCTTATGTCATTCAGCAAGAA
AACCATGGTTCAGTTATGGATGTAGTGGACAGGCGCTTGCTTGGGGAGGAGCCTTTGACT
AATGTAACTACTGGTATGGACTCGTTCTTGGCGCTTGCACTTTCGTGTTTAAGAGAAACG
AAGACAGAGAGACCCTGCATGAAAGATGTTGTTCAGCAACTTCACTGCATAAGTGAAATA
GTTGATCAAGAAGAGCCTATTGAGGTTAGTTAG