Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033788
CDS Infomation

pacid=37457467 polypeptide=PGSC0003DMP400022994 locus=PGSC0003DMG401012981 ID=PGSC0003DMT400033788.v4.03 annot-version=v4.03
Sequence

ATGGAAAACAATAGCTCAAAAGTAGAGATGATGAAGCCAGTATTCCTCAAGGCTGGAATA
CCAATAGCCCTCACTTTAGCTGGTTACATAATTGCCAAAATCACCACTAAAAAAATCTCT
CAAATTTCACCAATTCAAGAAAATACTCATGAGGTCTCAAGAAAAGATGAAAATGGTCAT
CAAAATCTTGAAATTTCAGAATCTTTATCTTGTATAGAAGCACATGATTATGATGATGAT
CATTGTTCTACAAATACCCTTTACAATGATTCATCAAAAAGTTTTGATCTTTATCAAAAT
AAATCCAAATTTCAAGCAAATCATCATGAAATCTCAAGAAATGGAGATGGTCATCAAAAT
CTTGATAATTCAGAAACTTTATCTTGTATTGAATCTGATGATAATGATCATTGTTCTACA
AACACCCTCTACAAAGATTCATCAGAAAGTTTCAATCTTTATCAAGAAAAATGCAAAATT
CAAGAAAATCCTCATGAGGTTTCAAGAAATGAAGATGGTCATCAAAATCTTGAAAATTCA
GAAACTTTATCTTGTATTGAAGCTAATGATGATGATCATTGTTCTACACATACCCTTTAC
AAAGATTCATTAGAAAGTTTCAATCTTTATCAAGAAAAACACAAAATTCAAGAAGATATT
AAGGCCAAATTTCAACACTATACTCACTTGAAAGAGAAAGAAATTGCACTTATGGATATG
CAATACAAGTTGTTATTAGAGATCAATAAAGTTGAGTTCTTTAGTAAGGAAATTACACTA
ATGGAAGCAGAGAGCCAAAGATTTCAAAATATGGTAATTGAATATTTGAGAATTATGGAA
CTTCTTGATTTGTCAAATTCAGAAAATAGTTTGCTTCAAAAAAGAGTTAAGAAGCTTTTG
AAGAAGATTAAAGAACATTCAAGAGTTATGAAGGAACAAAAATTTCAACTTGAAGCTAAG
GAAAAAGAAATTTCAAGAAATCAAGAAGGGCTAGAAATGAAAGATCATGTCATCAAGGAA
ATGGAATTGGAAATTCAGCAGCTGAAAATGGAGCTGGAATTGGCAAAGACTTCAAATCAA
TCAAAGAATGATGTAGAAGTTGTGACAATAGAAGATTACAAAGAATTGGTAAATGAACTT
GAGCAATTGCAAAAGGACAAAGCTAGTGAAGACAAAGAGCTAATATACTTAAGATGGTGC
AATGCATGTTTAAGACATGAATTAATGAAAAGAAATCAAGAACAAATGGAACAAGGGAAA
AATCAAGAATTGAATTTGGGAGAAGAAAATAGAGAAAATGTTGAAGAATTTGTACCAAAA
CTACATGATTTAATAATTGGGAGGAGTTCATCAGTTGGGCATAATGAATCTTGTTTAAAT
TCACCTATTAATGATCATTCAAAAAGGAGAAAATTAATGCAAAAGTTCAAGAAATGGGTA
GAGGGAAGTGATAAAATGAAAAATGAAACAAATTGCTTTAAGAGGCATTGTGTTTCTGAT
CATACTGAGAATTTGATTCATCCTGCTAGAAAATCATGTTCTAGTGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022994
PEP Infomation

pacid=37457467 transcript=PGSC0003DMT400033788 locus=PGSC0003DMG401012981 ID=PGSC0003DMT400033788.v4.03 annot-version=v4.03
Sequence

MENNSSKVEMMKPVFLKAGIPIALTLAGYIIAKITTKKISQISPIQENTHEVSRKDENGH
QNLEISESLSCIEAHDYDDDHCSTNTLYNDSSKSFDLYQNKSKFQANHHEISRNGDGHQN
LDNSETLSCIESDDNDHCSTNTLYKDSSESFNLYQEKCKIQENPHEVSRNEDGHQNLENS
ETLSCIEANDDDHCSTHTLYKDSLESFNLYQEKHKIQEDIKAKFQHYTHLKEKEIALMDM
QYKLLLEINKVEFFSKEITLMEAESQRFQNMVIEYLRIMELLDLSNSENSLLQKRVKKLL
KKIKEHSRVMKEQKFQLEAKEKEISRNQEGLEMKDHVIKEMELEIQQLKMELELAKTSNQ
SKNDVEVVTIEDYKELVNELEQLQKDKASEDKELIYLRWCNACLRHELMKRNQEQMEQGK
NQELNLGEENRENVEEFVPKLHDLIIGRSSSVGHNESCLNSPINDHSKRRKLMQKFKKWV
EGSDKMKNETNCFKRHCVSDHTENLIHPARKSCSSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400033788
Transcript Infomation

pacid=37457467 locus=PGSC0003DMG401012981 ID=PGSC0003DMT400033788.v4.03 annot-version=v4.03
Sequence

ATGGAAAACAATAGCTCAAAAGTAGAGATGATGAAGCCAGTATTCCTCAAGGCTGGAATA
CCAATAGCCCTCACTTTAGCTGGTTACATAATTGCCAAAATCACCACTAAAAAAATCTCT
CAAATTTCACCAATTCAAGAAAATACTCATGAGGTCTCAAGAAAAGATGAAAATGGTCAT
CAAAATCTTGAAATTTCAGAATCTTTATCTTGTATAGAAGCACATGATTATGATGATGAT
CATTGTTCTACAAATACCCTTTACAATGATTCATCAAAAAGTTTTGATCTTTATCAAAAT
AAATCCAAATTTCAAGCAAATCATCATGAAATCTCAAGAAATGGAGATGGTCATCAAAAT
CTTGATAATTCAGAAACTTTATCTTGTATTGAATCTGATGATAATGATCATTGTTCTACA
AACACCCTCTACAAAGATTCATCAGAAAGTTTCAATCTTTATCAAGAAAAATGCAAAATT
CAAGAAAATCCTCATGAGGTTTCAAGAAATGAAGATGGTCATCAAAATCTTGAAAATTCA
GAAACTTTATCTTGTATTGAAGCTAATGATGATGATCATTGTTCTACACATACCCTTTAC
AAAGATTCATTAGAAAGTTTCAATCTTTATCAAGAAAAACACAAAATTCAAGAAGATATT
AAGGCCAAATTTCAACACTATACTCACTTGAAAGAGAAAGAAATTGCACTTATGGATATG
CAATACAAGTTGTTATTAGAGATCAATAAAGTTGAGTTCTTTAGTAAGGAAATTACACTA
ATGGAAGCAGAGAGCCAAAGATTTCAAAATATGGTAATTGAATATTTGAGAATTATGGAA
CTTCTTGATTTGTCAAATTCAGAAAATAGTTTGCTTCAAAAAAGAGTTAAGAAGCTTTTG
AAGAAGATTAAAGAACATTCAAGAGTTATGAAGGAACAAAAATTTCAACTTGAAGCTAAG
GAAAAAGAAATTTCAAGAAATCAAGAAGGGCTAGAAATGAAAGATCATGTCATCAAGGAA
ATGGAATTGGAAATTCAGCAGCTGAAAATGGAGCTGGAATTGGCAAAGACTTCAAATCAA
TCAAAGAATGATGTAGAAGTTGTGACAATAGAAGATTACAAAGAATTGGTAAATGAACTT
GAGCAATTGCAAAAGGACAAAGCTAGTGAAGACAAAGAGCTAATATACTTAAGATGGTGC
AATGCATGTTTAAGACATGAATTAATGAAAAGAAATCAAGAACAAATGGAACAAGGGAAA
AATCAAGAATTGAATTTGGGAGAAGAAAATAGAGAAAATGTTGAAGAATTTGTACCAAAA
CTACATGATTTAATAATTGGGAGGAGTTCATCAGTTGGGCATAATGAATCTTGTTTAAAT
TCACCTATTAATGATCATTCAAAAAGGAGAAAATTAATGCAAAAGTTCAAGAAATGGGTA
GAGGGAAGTGATAAAATGAAAAATGAAACAAATTGCTTTAAGAGGCATTGTGTTTCTGAT
CATACTGAGAATTTGATTCATCCTGCTAGAAAATCATGTTCTAGTGCCTAA