Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033689
CDS Infomation

pacid=37447292 polypeptide=PGSC0003DMP400022916 locus=PGSC0003DMG400012941 ID=PGSC0003DMT400033689.v4.03 annot-version=v4.03
Sequence

ATGAAGGCTTGGGAGGCAACCGTGAGGAAAACACAAGCAGTCGCGAGGAAACGAGCCAAC
ACAATATTTGGTACATATGGTCCATCGCACGTTGAGGAAGAGATAATTGATCAAGTAGAT
GTAGAAGAGGACAATGAAGGTCATGCGAATGGGGAGGTTTACCATTCGGAGAGGTTCCTC
CCCAATGGAGATTACTATAGTGGCTATTGGGTTGATAGTTTCCCCCATGGACATGGAAAA
TATTGGTGGACTGATGGATGCATGTATGTAGGTGATTGGTTTCGAGGGAAAAAGATGGGG
AAAGGAACGTTTAGTTGGCCGTCTGGTGCTATGTATGAGGGGAATTTCAAGAGTGGATAT
ATGGATGGTGAAGGCACGTTTACGGGGCCTAATGGAGACTCATTTAAAGGTTCTTGGGTG
ATGAATTTGAAACATGGATATGGGGTTAAAGAATACTCTAATGGTGATGTTTACGATGGA
GAATGGAATCGAGGATTACAACAAGGAAACGGGAAGTATGCATGGAAGAATGGGAATTGT
TATGTTGGTGAATGGAAGAATGGTGTTATATGTGGTAAAGGCAAGATGTGTTGGAAAAAT
GGTAATGTGTATGAAGGGAATTGGGAAGATGGAGTGCCAAAGGGAAATGGAACATTGAAA
TGGGATGATGGGAGTTTTTATGTTGGAAATTGGAATAAAGAACAAAATGAACAAAATGGT
ACTTTTTATCCATCTGCATCATTGTTAGAAGGTGGAAATCTTGATTGGGATCCTCAAGAG
GTTTACAATACTGATTTGATAGAATGTAGCATTTGTCCAAATGAGAAGGTTTCAATATTA
CCTTCTCAGAAAAAGTTGGCAGTTTGGAGGTCTGCCAAGGCGACAGAAAACAACGTTAGG
CCAAGGAGGATGTCAGTAGATGGGCGAATAGACGCAGCCCCTGTAGATAGGGAATTTGGT
AGAATGCGCTTATCAGACTGTGCCGGAACACCTCCAAGAATTTCTTGTATAGATGATGCT
ATGGATGGATATATTAGAGGGAGTCCTATTAGACATCCTAAGGCAGCAAAAAGGCAAGGA
GAGACTATTTCCAAAGGGCATAAGAACTATGACCTTATGCTCAATTTGCAGTTGGGAATC
AGGCATTCAGTAGGAAGGCCAGGACCAGTTCCATCCCTAGATCTCAAGCCTTCGGCATTT
GATCCGAAAGAGAAGTACTGGACAAGATTCCCACCTGAAGGATCCAAAAGCACACCTCCT
CATCCATCTTGTGAATTCAGATGGAAAGACTATTGCCCAAAAGTTTTCAGGGCTTTAAGG
ATGTTATTCAAAGTCGATGCAGCTGATTATATGTTGTCTATTTGTGGTAATGACGCCCTC
AGGGAGCTATGTTCCCCAGGAAAAAGTGGAAGCTTCTTCTACTTAACAAATGATGATAGA
TACATGATCAAGACAATGAAGAAGGCAGAAGTGAAAGTGCTTCTAAGGATGCTCCATGCC
TATTTCAGTCACGTTCGTTCTTTTGATAACACGCTAATGACCAAGTATTTTGGCCTGCAT
TGTGTTAAGCTAACTGGACCAGCACAGAAAAAGGTACGATTTGTTATCATGGGGAATCTC
TTCTGCACTGATTACACAATTCATAGACGATTTGACTTGAAAGGGTCAACGTTTGGCCGG
ATGACAGATAAACCAGAATCAGAGATTGATGCAACCACAACTCTAAAGGACCTTGATCTC
AACTTCATATTCAGGTTACCTAAGACATGGTTCCAAGAATTCCGAAGGCAGGTTGATAGG
GATTGTGAGCTACTAGAACAAGAGAGAGTGATGGACTACAGCCTTTTAGTTGGTCTTCAT
TTTAAGGAAGCAACTGGAGATCAAACTCCTCCTCCTGGTTGTAGAACACCTACTGATAAT
GTAGGATTGGAAGATGGCTCAGCTCCTCGTCTTTCTCGTGCAGATAGGGATCGATTGCTT
CTTGATCCTTCCGGGTTGGCTGGCAGAAGTTTGGGTATAAACATGTCGGCACGCGTTGAA
AGGACAGAGAGGAAAAATGACTTAGACTTTCAATTAGTAGGAGAACCAACAGGGGAGTTT
TATGATGTGATATTATTTTTTGGAATCATAGACATACTTCAAGACTATGACATTACAAAG
AAGCTTGAGCATGCATATAAATCTATCCAATGTGATCCCAATTCTATCTCAGCTGTTGAT
CCAAAGGCATACTCAAGACGTTTTCGCGATTACATATACAAAGTTTTTACAGAGGACACT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400022916
PEP Infomation

pacid=37447292 transcript=PGSC0003DMT400033689 locus=PGSC0003DMG400012941 ID=PGSC0003DMT400033689.v4.03 annot-version=v4.03
Sequence

MKAWEATVRKTQAVARKRANTIFGTYGPSHVEEEIIDQVDVEEDNEGHANGEVYHSERFL
PNGDYYSGYWVDSFPHGHGKYWWTDGCMYVGDWFRGKKMGKGTFSWPSGAMYEGNFKSGY
MDGEGTFTGPNGDSFKGSWVMNLKHGYGVKEYSNGDVYDGEWNRGLQQGNGKYAWKNGNC
YVGEWKNGVICGKGKMCWKNGNVYEGNWEDGVPKGNGTLKWDDGSFYVGNWNKEQNEQNG
TFYPSASLLEGGNLDWDPQEVYNTDLIECSICPNEKVSILPSQKKLAVWRSAKATENNVR
PRRMSVDGRIDAAPVDREFGRMRLSDCAGTPPRISCIDDAMDGYIRGSPIRHPKAAKRQG
ETISKGHKNYDLMLNLQLGIRHSVGRPGPVPSLDLKPSAFDPKEKYWTRFPPEGSKSTPP
HPSCEFRWKDYCPKVFRALRMLFKVDAADYMLSICGNDALRELCSPGKSGSFFYLTNDDR
YMIKTMKKAEVKVLLRMLHAYFSHVRSFDNTLMTKYFGLHCVKLTGPAQKKVRFVIMGNL
FCTDYTIHRRFDLKGSTFGRMTDKPESEIDATTTLKDLDLNFIFRLPKTWFQEFRRQVDR
DCELLEQERVMDYSLLVGLHFKEATGDQTPPPGCRTPTDNVGLEDGSAPRLSRADRDRLL
LDPSGLAGRSLGINMSARVERTERKNDLDFQLVGEPTGEFYDVILFFGIIDILQDYDITK
KLEHAYKSIQCDPNSISAVDPKAYSRRFRDYIYKVFTEDT*

Transcript Sequence

Transcript ID

PGSC0003DMT400033689
Transcript Infomation

pacid=37447292 locus=PGSC0003DMG400012941 ID=PGSC0003DMT400033689.v4.03 annot-version=v4.03
Sequence

ATGAAGGCTTGGGAGGCAACCGTGAGGAAAACACAAGCAGTCGCGAGGAAACGAGCCAAC
ACAATATTTGGTACATATGGTCCATCGCACGTTGAGGAAGAGATAATTGATCAAGTAGAT
GTAGAAGAGGACAATGAAGGTCATGCGAATGGGGAGGTTTACCATTCGGAGAGGTTCCTC
CCCAATGGAGATTACTATAGTGGCTATTGGGTTGATAGTTTCCCCCATGGACATGGAAAA
TATTGGTGGACTGATGGATGCATGTATGTAGGTGATTGGTTTCGAGGGAAAAAGATGGGG
AAAGGAACGTTTAGTTGGCCGTCTGGTGCTATGTATGAGGGGAATTTCAAGAGTGGATAT
ATGGATGGTGAAGGCACGTTTACGGGGCCTAATGGAGACTCATTTAAAGGTTCTTGGGTG
ATGAATTTGAAACATGGATATGGGGTTAAAGAATACTCTAATGGTGATGTTTACGATGGA
GAATGGAATCGAGGATTACAACAAGGAAACGGGAAGTATGCATGGAAGAATGGGAATTGT
TATGTTGGTGAATGGAAGAATGGTGTTATATGTGGTAAAGGCAAGATGTGTTGGAAAAAT
GGTAATGTGTATGAAGGGAATTGGGAAGATGGAGTGCCAAAGGGAAATGGAACATTGAAA
TGGGATGATGGGAGTTTTTATGTTGGAAATTGGAATAAAGAACAAAATGAACAAAATGGT
ACTTTTTATCCATCTGCATCATTGTTAGAAGGTGGAAATCTTGATTGGGATCCTCAAGAG
GTTTACAATACTGATTTGATAGAATGTAGCATTTGTCCAAATGAGAAGGTTTCAATATTA
CCTTCTCAGAAAAAGTTGGCAGTTTGGAGGTCTGCCAAGGCGACAGAAAACAACGTTAGG
CCAAGGAGGATGTCAGTAGATGGGCGAATAGACGCAGCCCCTGTAGATAGGGAATTTGGT
AGAATGCGCTTATCAGACTGTGCCGGAACACCTCCAAGAATTTCTTGTATAGATGATGCT
ATGGATGGATATATTAGAGGGAGTCCTATTAGACATCCTAAGGCAGCAAAAAGGCAAGGA
GAGACTATTTCCAAAGGGCATAAGAACTATGACCTTATGCTCAATTTGCAGTTGGGAATC
AGGCATTCAGTAGGAAGGCCAGGACCAGTTCCATCCCTAGATCTCAAGCCTTCGGCATTT
GATCCGAAAGAGAAGTACTGGACAAGATTCCCACCTGAAGGATCCAAAAGCACACCTCCT
CATCCATCTTGTGAATTCAGATGGAAAGACTATTGCCCAAAAGTTTTCAGGGCTTTAAGG
ATGTTATTCAAAGTCGATGCAGCTGATTATATGTTGTCTATTTGTGGTAATGACGCCCTC
AGGGAGCTATGTTCCCCAGGAAAAAGTGGAAGCTTCTTCTACTTAACAAATGATGATAGA
TACATGATCAAGACAATGAAGAAGGCAGAAGTGAAAGTGCTTCTAAGGATGCTCCATGCC
TATTTCAGTCACGTTCGTTCTTTTGATAACACGCTAATGACCAAGTATTTTGGCCTGCAT
TGTGTTAAGCTAACTGGACCAGCACAGAAAAAGGTACGATTTGTTATCATGGGGAATCTC
TTCTGCACTGATTACACAATTCATAGACGATTTGACTTGAAAGGGTCAACGTTTGGCCGG
ATGACAGATAAACCAGAATCAGAGATTGATGCAACCACAACTCTAAAGGACCTTGATCTC
AACTTCATATTCAGGTTACCTAAGACATGGTTCCAAGAATTCCGAAGGCAGGTTGATAGG
GATTGTGAGCTACTAGAACAAGAGAGAGTGATGGACTACAGCCTTTTAGTTGGTCTTCAT
TTTAAGGAAGCAACTGGAGATCAAACTCCTCCTCCTGGTTGTAGAACACCTACTGATAAT
GTAGGATTGGAAGATGGCTCAGCTCCTCGTCTTTCTCGTGCAGATAGGGATCGATTGCTT
CTTGATCCTTCCGGGTTGGCTGGCAGAAGTTTGGGTATAAACATGTCGGCACGCGTTGAA
AGGACAGAGAGGAAAAATGACTTAGACTTTCAATTAGTAGGAGAACCAACAGGGGAGTTT
TATGATGTGATATTATTTTTTGGAATCATAGACATACTTCAAGACTATGACATTACAAAG
AAGCTTGAGCATGCATATAAATCTATCCAATGTGATCCCAATTCTATCTCAGCTGTTGAT
CCAAAGGCATACTCAAGACGTTTTCGCGATTACATATACAAAGTTTTTACAGAGGACACT
TGA