Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033637
CDS Infomation

pacid=37425766 polypeptide=PGSC0003DMP400022881 locus=PGSC0003DMG400012919 ID=PGSC0003DMT400033637.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAGCAACACCTAATCACACACAAACTGTTGCTGGTTGGGCAGCTCATGATTCT
TCTGGAAAAATCACACCTTTTAACTTCAAGAGAAGAGAAAATGGTGAGAATGATGTGACC
ATTGAGATCTTGTATTGTGGAATCTGTCATACGGATATTCATCATGTCAAGGATGACTGG
GGCATTACTAAGTACCCTGTTGTGCCTGGGCATGAAATTACTGGGATTATAACAAAGGTG
GGTAGCAATGTGAGTAAATTCAAGATGGGAGACAGAGTAGGGGTAGGTTGCTTGGCCGCA
ACATGTTTGAAATGTGAGTATTGCGAGGAGTCTCAAGAGAACTACTGTGACCAAGTAGAA
TTCACTTACAATGGCATCTTTTGGGATGGTAGCATTACTTATGGTGGCTACTCAAAAATG
CTTGTTGCTGATCATAGGTACGTGGTACGTATACCAGATAACATGGCAATGGACAGAGCA
GCACCATTATTATGTGCAGGAATAACAGTTTTTACTCCTTTGAAAGACAATAATTTGGTG
GATACAAAAGGTAAAAAAATAGGAATAATAGGTCTTGGTGGACTTGGACATGTAGCTGTC
AAATTTGGAAAAGCATTTGGACATCATGTGACTGTCATTAGCACCTCTCCAATCAAAGAA
CAAGAAGCCAAAGACAACTTAGGTGCTGATGATTTTATAATAAGCACTAATCCCAAACAA
ATGCTGGAAAAGAAAAGAACCCTAGACTTTATTTTGGATACAGTGTCAGCCAAACACTCA
CTTGGGAGTTACTTAGAGCTCTTAAAAGTGAATGGAACTCTAGTGATTGTTGGAGCACCA
GATAAGCCAATTGATTTGCCCGCTTTCCCTATGATATTTGGAAAAAGAACAGTGAAAGGA
AGCATGATAGGAAGTATAGAAGAGACACAAGAAATGATGGACTTATGTGGAAAACATAAC
ATATTGAGTGATATAGAGATTATCACTACTGATCAAATTAATGAAGGACTTGAAAGGCTT
GCTAAAAATGATGTTAAGTACCGTTTTGTCATTGACATTGCTGGTCCATCTTCTCATCTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400022881
PEP Infomation

pacid=37425766 transcript=PGSC0003DMT400033637 locus=PGSC0003DMG400012919 ID=PGSC0003DMT400033637.v4.03 annot-version=v4.03
Sequence

MAQATPNHTQTVAGWAAHDSSGKITPFNFKRRENGENDVTIEILYCGICHTDIHHVKDDW
GITKYPVVPGHEITGIITKVGSNVSKFKMGDRVGVGCLAATCLKCEYCEESQENYCDQVE
FTYNGIFWDGSITYGGYSKMLVADHRYVVRIPDNMAMDRAAPLLCAGITVFTPLKDNNLV
DTKGKKIGIIGLGGLGHVAVKFGKAFGHHVTVISTSPIKEQEAKDNLGADDFIISTNPKQ
MLEKKRTLDFILDTVSAKHSLGSYLELLKVNGTLVIVGAPDKPIDLPAFPMIFGKRTVKG
SMIGSIEETQEMMDLCGKHNILSDIEIITTDQINEGLERLAKNDVKYRFVIDIAGPSSHL
*

Transcript Sequence

Transcript ID

PGSC0003DMT400033637
Transcript Infomation

pacid=37425766 locus=PGSC0003DMG400012919 ID=PGSC0003DMT400033637.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAGCAACACCTAATCACACACAAACTGTTGCTGGTTGGGCAGCTCATGATTCT
TCTGGAAAAATCACACCTTTTAACTTCAAGAGAAGAGAAAATGGTGAGAATGATGTGACC
ATTGAGATCTTGTATTGTGGAATCTGTCATACGGATATTCATCATGTCAAGGATGACTGG
GGCATTACTAAGTACCCTGTTGTGCCTGGGCATGAAATTACTGGGATTATAACAAAGGTG
GGTAGCAATGTGAGTAAATTCAAGATGGGAGACAGAGTAGGGGTAGGTTGCTTGGCCGCA
ACATGTTTGAAATGTGAGTATTGCGAGGAGTCTCAAGAGAACTACTGTGACCAAGTAGAA
TTCACTTACAATGGCATCTTTTGGGATGGTAGCATTACTTATGGTGGCTACTCAAAAATG
CTTGTTGCTGATCATAGGTACGTGGTACGTATACCAGATAACATGGCAATGGACAGAGCA
GCACCATTATTATGTGCAGGAATAACAGTTTTTACTCCTTTGAAAGACAATAATTTGGTG
GATACAAAAGGTAAAAAAATAGGAATAATAGGTCTTGGTGGACTTGGACATGTAGCTGTC
AAATTTGGAAAAGCATTTGGACATCATGTGACTGTCATTAGCACCTCTCCAATCAAAGAA
CAAGAAGCCAAAGACAACTTAGGTGCTGATGATTTTATAATAAGCACTAATCCCAAACAA
ATGCTGGAAAAGAAAAGAACCCTAGACTTTATTTTGGATACAGTGTCAGCCAAACACTCA
CTTGGGAGTTACTTAGAGCTCTTAAAAGTGAATGGAACTCTAGTGATTGTTGGAGCACCA
GATAAGCCAATTGATTTGCCCGCTTTCCCTATGATATTTGGAAAAAGAACAGTGAAAGGA
AGCATGATAGGAAGTATAGAAGAGACACAAGAAATGATGGACTTATGTGGAAAACATAAC
ATATTGAGTGATATAGAGATTATCACTACTGATCAAATTAATGAAGGACTTGAAAGGCTT
GCTAAAAATGATGTTAAGTACCGTTTTGTCATTGACATTGCTGGTCCATCTTCTCATCTT
TAA