Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033636
CDS Infomation

pacid=37424748 polypeptide=PGSC0003DMP400022880 locus=PGSC0003DMG400012918 ID=PGSC0003DMT400033636.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGTGCTGCTAAGTGCTTCAGTTGAGGTTTTACTTCAAAAGTTACTTTTGCTT
GCAACAAATTGTAATAGTCATTTATGGGGTTCCAAGAAAGAATTGGAAAATCTGAGGAGA
TGTTTAGCTATGGCTAGAGCAGTTTTACATGATGCTGAGAGGCAACAGAGAAAGGACCAA
GCAGTGAAGCTTTGGCTGAAGAAACTTGAAGATTTAGCTTATGATGCTGATAATTTGTTG
GATGAGCTCAATCACACAACACTCAAGAAAAGTGAGTGGAAGGTATGTTTTGTTTTATCA
CTACCAAATCCACTTTCTTGTAAAATGAGGGCCAAAATCAGGGAGATCATTGTGAACCTG
AAAATGATTAATGAGGAAGCCAATGACTTTGCTATCCCAAGGGGAGTTGAGGATGGAATT
AATCATATCAACCATAAGGAGACTGACTGTTTCCATGGTGATTCCAATATTGTTGGAAGG
GAGGATGATGTTTCAACAATGGTTGAATCCCTAATTTGTCAAACCAACCAAGTAGTTGCA
GTTTTCCCTATAGTAGGCATGGGTGGGCTAGGTAAAACTACATTGGCTCGATTGATATAC
AACGATGAACAAATAGTTAGATATTTTGATGAGAGAATATGGGTCTGTGTATCTGAGAAT
TTTGATGTGAACAAAATTATTAGACTGGTTTTAGAATCATTAACACAGAGAAGTATTGAT
GTGCAAAGTAGGAATGCTTTACTTCAAATACTTCACAAGGAACTAGGTGGCAGAAAATAC
TTGCTCGTTCTCGATGATGTTTGGAATGAAAAGCTTGAGGAGTGGGATGATTTTAAAAGG
TCCTTAGTTGGCATTAATGCAACAAAGGGAAATGCCATTATTGTGACTACTCGAAGTGAA
CGAGTGGCATCCATAGTAGCAACGCATCATCTTCATTTCTTGGAGAAATTATCAGAAGAT
GACTGTTGGTCTGTGTTCAAAGAAAGAGCATTTCCAGAAGGAGATGTGCCAATGGAATTG
GTACCAATTGGTAAACAAATTGCGCACAAGTGTAGTGGTTTGCCTTTAGCAGCTAACTTG
CTTGGAGGAATGTTGCGTCTCACGAAAGAAACCAGTGAGTGGTCATTAGTTTTGAGAAAT
GGCCTCTGGAACTTAAACGGGGATGAAAATGCAGTCTTGCAAGTGCTGAAGCTGAGTTTT
GATCATTTGCCATCAACATCTGTTAAGAAGTGTTTCGCCTATTGTTCAATTTTCAGTCGG
GATCATGACATTGAAAAGGATCAACTGGTACAATTATGGATGGCTGAAGGATTTCTCCAA
CTAAGCCAAGGAGATCATTTGAAAATGGAAAGCTTGGGAAATGAGTTCTTCAACATTTTG
TTGCAAAATTCCCTATTACAGGATGTGAAAAGAGATGACTATGGTAACATTACCCATTGT
AAGATGCACAGCCATGTTCATGCTCTTGCTCAATCAATTTCGAGATATGAAGGATTTAAT
ATAGGGTGCAGTACTGAAGATGGCCATCCACATGTTCGATATCTTTCAATGAAGTCCTTA
AGGGAATCAATGCCTTCAGTTGTCAAGGAAAGAGCAAGATCTTTACGCACCTTGTTTTTA
GCAGATAATGTTTCTGGGAGCATGTTATCAAACTTCAAGTATTTGCGTGTATTAAGTTTC
CATGGTGTTGACGTTGCTGAGGTACCCTCATCAATCAGCAAGCTAATACATTTAAGATAT
CTTGATCTATCAGGCACCAAAATTCGAGCTTTAGCAGATTCACTTTGCATGCTTTTTAAT
CTACAGACTTTAAGATTAAATGGATGTGACTTTCTTGAGAGTATTCCGAGTCAGTTGAGC
AAGTTGAAAAACTTGAGACACCTACACTATTATTCATTCGATGCAACTTGTCTAATGCCA
TTCAAGATGGGACAATTAACTTGTCTGCAAACATTGCAATTCTTCAATGTTGGTTATGCT
GATGGTCAGCAAATTGGTGAGATTGGATTTTTGAAGGAACTTGGAGGTGATCTTGAAATA
AGAAATCTTGAGAAAGTAACTAACCAGCAAGAAGCTCGAAGTGCAGATCTGTGTAGAAAG
GAAAATATTTATAAGTTAATATTTCAATGGAGCAGTGGGAGGCAAGACACAGTCAATGAT
GATTCTGTCTTGGGAGGCCTTGAACCTCATCCAAATTTGAAAAGCTTGACAGTCCAGAAC
TTCATGGGTGACAAGTTACCCACATGGATTATGACAATGATGGTCAGTACTATTGAGGGG
CACTTACTGGGACTTGACAATCTGGTGGAGATCAAATTAAAAGGCTGTAGAAAGTGTGAA
GAACTACCAATGCTTGGGCACCTACCGCATCTCAAATATCTAGACCTCACTGGACTGGAT
AATTTGAAAACCATAAATCGTTCCTTTTATGGTAGAGACTTTCTCAGATCAAGAACCTAT
CAAGGTGATAATACGAATATCGCATCATTCAGATCACTAAAGAGACTCGTTTTCTGCAAC
ATGCCCAACTTAGTTGAGTGGACTGAACCAGAAGAGGTGACAACAGAGAAGGTGTTCCCT
CACTTGGAGGAAATAGAAATACACAACTGTTCACAATTAACTACCACTCCATGTTCTTTC
CCCAGCCTGGAGGAATTGAGGATTTCAAATGTTAGCAGTTACCAGCCGTTGGAAAATATA
TGCAGTAGTGATAACTCATCAGGTCTTACATTCCTACATATTGATGGGTTGCTGGAGCTT
GCTTGCCTTCCGGACAATCTTCTTAACAATGTTAAGAATCTGGTATATCTAGCTATATAT
AAATGTCCTAATTTGGTGCATGTTGTTCCACGTGTGAGAGGTTTTGGTTCCTTTCTTCGT
GTGTTGGATATCAAAGAGTGCACTAATCTTAGCACGTTACCTGATGATCTACAAACTCTT
CAGTCTCTTGCAATGCTGTGGATATCTAGATGTCCAAAAATTACGTCAATCCCAAGCTTG
GAAGGCCTGACGACTCTGGAAGAACTGAGAATCAGCTACTGTGACGAGTTGGCTTCTCTG
CCAAATGAAATGCTGCTGTCCTGCATGTCTCTGAAGTCTTTGAGCATAGAAAACTGTGTT
AATTTAACCTCCTTTCCTAATTTGAAACAGTTGCATTCCCTTTTATCCTTGAGAATTGTT
GATTGCCCACAGCTGACTTGTCTCCCCAAGGGGCTTCATTCTCTTTCTTGCTTAAACTAC
TTAAGAATTGGTCCATTTTCAGAGGATCTCACTTCATTTCCGATTCTTGATTACGAAGAC
GCTCCTAACAGTGAGATACATGAGGAAAACTTGCAACTTTTCTCTCTTAGAAGTTTAACA
CTTTTTGGGCGACCTCATTGGGACTCTCTGCCTGCATGGCTTCAAAGTCTTTCTTCTTTA
GCAGAACTACATCTTTATGATTTTGGATTTGAAGCTGTGCCTGAATGGATAAAAAACATG
TCTTCCCTAGAACGATTGGGCCTATACTGGTGTGAAAAAGTGAGTTTTCTTCCCTCCATT
GAAGCCACAAAATGCCTTGTCAAACTAAGAGAAGTGGAGATTTACAATTGCCCTTTATTG
AGTGAAAGATGCTCTTCTTTGAGTGGCTCTAATTCTGAATGGTCTAAAATTTCTCATATA
AACCAAATCAAAGTTGATGGTAAACAAATCACATCCGAGGCTACTTATGAAGTGTTACCA
TCTCCAACTCTCACAAAAAAAGAAAAAAAACGGAGGAAGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400022880
PEP Infomation

pacid=37424748 transcript=PGSC0003DMT400033636 locus=PGSC0003DMG400012918 ID=PGSC0003DMT400033636.v4.03 annot-version=v4.03
Sequence

MAEVLLSASVEVLLQKLLLLATNCNSHLWGSKKELENLRRCLAMARAVLHDAERQQRKDQ
AVKLWLKKLEDLAYDADNLLDELNHTTLKKSEWKVCFVLSLPNPLSCKMRAKIREIIVNL
KMINEEANDFAIPRGVEDGINHINHKETDCFHGDSNIVGREDDVSTMVESLICQTNQVVA
VFPIVGMGGLGKTTLARLIYNDEQIVRYFDERIWVCVSENFDVNKIIRLVLESLTQRSID
VQSRNALLQILHKELGGRKYLLVLDDVWNEKLEEWDDFKRSLVGINATKGNAIIVTTRSE
RVASIVATHHLHFLEKLSEDDCWSVFKERAFPEGDVPMELVPIGKQIAHKCSGLPLAANL
LGGMLRLTKETSEWSLVLRNGLWNLNGDENAVLQVLKLSFDHLPSTSVKKCFAYCSIFSR
DHDIEKDQLVQLWMAEGFLQLSQGDHLKMESLGNEFFNILLQNSLLQDVKRDDYGNITHC
KMHSHVHALAQSISRYEGFNIGCSTEDGHPHVRYLSMKSLRESMPSVVKERARSLRTLFL
ADNVSGSMLSNFKYLRVLSFHGVDVAEVPSSISKLIHLRYLDLSGTKIRALADSLCMLFN
LQTLRLNGCDFLESIPSQLSKLKNLRHLHYYSFDATCLMPFKMGQLTCLQTLQFFNVGYA
DGQQIGEIGFLKELGGDLEIRNLEKVTNQQEARSADLCRKENIYKLIFQWSSGRQDTVND
DSVLGGLEPHPNLKSLTVQNFMGDKLPTWIMTMMVSTIEGHLLGLDNLVEIKLKGCRKCE
ELPMLGHLPHLKYLDLTGLDNLKTINRSFYGRDFLRSRTYQGDNTNIASFRSLKRLVFCN
MPNLVEWTEPEEVTTEKVFPHLEEIEIHNCSQLTTTPCSFPSLEELRISNVSSYQPLENI
CSSDNSSGLTFLHIDGLLELACLPDNLLNNVKNLVYLAIYKCPNLVHVVPRVRGFGSFLR
VLDIKECTNLSTLPDDLQTLQSLAMLWISRCPKITSIPSLEGLTTLEELRISYCDELASL
PNEMLLSCMSLKSLSIENCVNLTSFPNLKQLHSLLSLRIVDCPQLTCLPKGLHSLSCLNY
LRIGPFSEDLTSFPILDYEDAPNSEIHEENLQLFSLRSLTLFGRPHWDSLPAWLQSLSSL
AELHLYDFGFEAVPEWIKNMSSLERLGLYWCEKVSFLPSIEATKCLVKLREVEIYNCPLL
SERCSSLSGSNSEWSKISHINQIKVDGKQITSEATYEVLPSPTLTKKEKKRRKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400033636
Transcript Infomation

pacid=37424748 locus=PGSC0003DMG400012918 ID=PGSC0003DMT400033636.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGTGCTGCTAAGTGCTTCAGTTGAGGTTTTACTTCAAAAGTTACTTTTGCTT
GCAACAAATTGTAATAGTCATTTATGGGGTTCCAAGAAAGAATTGGAAAATCTGAGGAGA
TGTTTAGCTATGGCTAGAGCAGTTTTACATGATGCTGAGAGGCAACAGAGAAAGGACCAA
GCAGTGAAGCTTTGGCTGAAGAAACTTGAAGATTTAGCTTATGATGCTGATAATTTGTTG
GATGAGCTCAATCACACAACACTCAAGAAAAGTGAGTGGAAGGTATGTTTTGTTTTATCA
CTACCAAATCCACTTTCTTGTAAAATGAGGGCCAAAATCAGGGAGATCATTGTGAACCTG
AAAATGATTAATGAGGAAGCCAATGACTTTGCTATCCCAAGGGGAGTTGAGGATGGAATT
AATCATATCAACCATAAGGAGACTGACTGTTTCCATGGTGATTCCAATATTGTTGGAAGG
GAGGATGATGTTTCAACAATGGTTGAATCCCTAATTTGTCAAACCAACCAAGTAGTTGCA
GTTTTCCCTATAGTAGGCATGGGTGGGCTAGGTAAAACTACATTGGCTCGATTGATATAC
AACGATGAACAAATAGTTAGATATTTTGATGAGAGAATATGGGTCTGTGTATCTGAGAAT
TTTGATGTGAACAAAATTATTAGACTGGTTTTAGAATCATTAACACAGAGAAGTATTGAT
GTGCAAAGTAGGAATGCTTTACTTCAAATACTTCACAAGGAACTAGGTGGCAGAAAATAC
TTGCTCGTTCTCGATGATGTTTGGAATGAAAAGCTTGAGGAGTGGGATGATTTTAAAAGG
TCCTTAGTTGGCATTAATGCAACAAAGGGAAATGCCATTATTGTGACTACTCGAAGTGAA
CGAGTGGCATCCATAGTAGCAACGCATCATCTTCATTTCTTGGAGAAATTATCAGAAGAT
GACTGTTGGTCTGTGTTCAAAGAAAGAGCATTTCCAGAAGGAGATGTGCCAATGGAATTG
GTACCAATTGGTAAACAAATTGCGCACAAGTGTAGTGGTTTGCCTTTAGCAGCTAACTTG
CTTGGAGGAATGTTGCGTCTCACGAAAGAAACCAGTGAGTGGTCATTAGTTTTGAGAAAT
GGCCTCTGGAACTTAAACGGGGATGAAAATGCAGTCTTGCAAGTGCTGAAGCTGAGTTTT
GATCATTTGCCATCAACATCTGTTAAGAAGTGTTTCGCCTATTGTTCAATTTTCAGTCGG
GATCATGACATTGAAAAGGATCAACTGGTACAATTATGGATGGCTGAAGGATTTCTCCAA
CTAAGCCAAGGAGATCATTTGAAAATGGAAAGCTTGGGAAATGAGTTCTTCAACATTTTG
TTGCAAAATTCCCTATTACAGGATGTGAAAAGAGATGACTATGGTAACATTACCCATTGT
AAGATGCACAGCCATGTTCATGCTCTTGCTCAATCAATTTCGAGATATGAAGGATTTAAT
ATAGGGTGCAGTACTGAAGATGGCCATCCACATGTTCGATATCTTTCAATGAAGTCCTTA
AGGGAATCAATGCCTTCAGTTGTCAAGGAAAGAGCAAGATCTTTACGCACCTTGTTTTTA
GCAGATAATGTTTCTGGGAGCATGTTATCAAACTTCAAGTATTTGCGTGTATTAAGTTTC
CATGGTGTTGACGTTGCTGAGGTACCCTCATCAATCAGCAAGCTAATACATTTAAGATAT
CTTGATCTATCAGGCACCAAAATTCGAGCTTTAGCAGATTCACTTTGCATGCTTTTTAAT
CTACAGACTTTAAGATTAAATGGATGTGACTTTCTTGAGAGTATTCCGAGTCAGTTGAGC
AAGTTGAAAAACTTGAGACACCTACACTATTATTCATTCGATGCAACTTGTCTAATGCCA
TTCAAGATGGGACAATTAACTTGTCTGCAAACATTGCAATTCTTCAATGTTGGTTATGCT
GATGGTCAGCAAATTGGTGAGATTGGATTTTTGAAGGAACTTGGAGGTGATCTTGAAATA
AGAAATCTTGAGAAAGTAACTAACCAGCAAGAAGCTCGAAGTGCAGATCTGTGTAGAAAG
GAAAATATTTATAAGTTAATATTTCAATGGAGCAGTGGGAGGCAAGACACAGTCAATGAT
GATTCTGTCTTGGGAGGCCTTGAACCTCATCCAAATTTGAAAAGCTTGACAGTCCAGAAC
TTCATGGGTGACAAGTTACCCACATGGATTATGACAATGATGGTCAGTACTATTGAGGGG
CACTTACTGGGACTTGACAATCTGGTGGAGATCAAATTAAAAGGCTGTAGAAAGTGTGAA
GAACTACCAATGCTTGGGCACCTACCGCATCTCAAATATCTAGACCTCACTGGACTGGAT
AATTTGAAAACCATAAATCGTTCCTTTTATGGTAGAGACTTTCTCAGATCAAGAACCTAT
CAAGGTGATAATACGAATATCGCATCATTCAGATCACTAAAGAGACTCGTTTTCTGCAAC
ATGCCCAACTTAGTTGAGTGGACTGAACCAGAAGAGGTGACAACAGAGAAGGTGTTCCCT
CACTTGGAGGAAATAGAAATACACAACTGTTCACAATTAACTACCACTCCATGTTCTTTC
CCCAGCCTGGAGGAATTGAGGATTTCAAATGTTAGCAGTTACCAGCCGTTGGAAAATATA
TGCAGTAGTGATAACTCATCAGGTCTTACATTCCTACATATTGATGGGTTGCTGGAGCTT
GCTTGCCTTCCGGACAATCTTCTTAACAATGTTAAGAATCTGGTATATCTAGCTATATAT
AAATGTCCTAATTTGGTGCATGTTGTTCCACGTGTGAGAGGTTTTGGTTCCTTTCTTCGT
GTGTTGGATATCAAAGAGTGCACTAATCTTAGCACGTTACCTGATGATCTACAAACTCTT
CAGTCTCTTGCAATGCTGTGGATATCTAGATGTCCAAAAATTACGTCAATCCCAAGCTTG
GAAGGCCTGACGACTCTGGAAGAACTGAGAATCAGCTACTGTGACGAGTTGGCTTCTCTG
CCAAATGAAATGCTGCTGTCCTGCATGTCTCTGAAGTCTTTGAGCATAGAAAACTGTGTT
AATTTAACCTCCTTTCCTAATTTGAAACAGTTGCATTCCCTTTTATCCTTGAGAATTGTT
GATTGCCCACAGCTGACTTGTCTCCCCAAGGGGCTTCATTCTCTTTCTTGCTTAAACTAC
TTAAGAATTGGTCCATTTTCAGAGGATCTCACTTCATTTCCGATTCTTGATTACGAAGAC
GCTCCTAACAGTGAGATACATGAGGAAAACTTGCAACTTTTCTCTCTTAGAAGTTTAACA
CTTTTTGGGCGACCTCATTGGGACTCTCTGCCTGCATGGCTTCAAAGTCTTTCTTCTTTA
GCAGAACTACATCTTTATGATTTTGGATTTGAAGCTGTGCCTGAATGGATAAAAAACATG
TCTTCCCTAGAACGATTGGGCCTATACTGGTGTGAAAAAGTGAGTTTTCTTCCCTCCATT
GAAGCCACAAAATGCCTTGTCAAACTAAGAGAAGTGGAGATTTACAATTGCCCTTTATTG
AGTGAAAGATGCTCTTCTTTGAGTGGCTCTAATTCTGAATGGTCTAAAATTTCTCATATA
AACCAAATCAAAGTTGATGGTAAACAAATCACATCCGAGGCTACTTATGAAGTGTTACCA
TCTCCAACTCTCACAAAAAAAGAAAAAAAACGGAGGAAGAAATAA