Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033620
CDS Infomation

pacid=37475206 polypeptide=PGSC0003DMP400022866 locus=PGSC0003DMG400012910 ID=PGSC0003DMT400033620.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTTCTCTCTCTAGCATCTACTCACCTTCTTCATCTTTCAAATCTGAAGTG
AAATCCATTCACAAAATCACTTCTTCCCAATTGGGTTCAATTTATTTGCCCAATAAATCA
AGATTCCATGTTCACGCGGTGGCGCGTGAGGTTTCAGCGAGCTTGTCGGCCGGAAACAAT
GACGTTGTTCACAAGTTGAAGGAGAATGTTGGGTTGGAGAAAAACCCGAATGCTCTATGG
AAGAGATATGTTGACTGGCTTTATCAGCACAAGGAGTTGGGTTTGTATTTGGATATTAGT
CGAGTTGGATTCACTGATGGGTTTCTTGAGGAAATGGAGCCTCGTTTGCAAAAGGCGTTT
AAGGATATGGTGGATTTGGAGAAGGGAGCTATTGCAAACCCAGATGAGGGTAGAATGGTG
GGTCACTATTGGTTGAGAAGTCCTCATCTTGCTCCCAACTCATTTCTCAGGTTGCAGATT
GAGAATACTCTTGAAGCTGTTTGCCAGTTTGCAAATGATGTCGTCAGTGGTAAGATCAAG
ACTCCTTCTGGTGGCCGATTTACGCAAATTCTTTCCGTTGGAATTGGTGGTTCAGCTCTT
GGACCACAATTTGTGGCTGAGGCATTGGCACCTGACAACCCTCCTCTGAAGATAAGATTT
ATCGACAACACAGATCCAGCAGGCATTGATCATCAAATTGCGCAACTTGGCCCTGAGCTG
GCTTCAACACTTGTTATTGTTATTTCAAAGAGTGGAGGCACTCCAGAAACCCGAAATGGC
TTGCTAGAAGTTCAGAAGGCCTTCCGTGAAGCTGGCCTGATATTCGCAAAACAGGGTGTT
GCCATTACACAAGAAAACTCATTGCTTGACAACACTTCTAGAATTGAGGGTTGGTTGGCC
CGATTCCCTATGTTTGATTGGGTGGGTGGAAGAACCTCTGAAATGTCTGCAGTTGGTTTA
CTTCCAGCTGCACTTCAGGGAATTGATATTAGAGAGATGCTCGCTGGTGCTGCATTGATG
GACGAAGCAAACAGGACCACTGTGGTTCGGGATAACCCGGCAGCGCTACTAGCTTTGTGT
TGGTACTGGGCAACTGATGGAGTTGGATCCAAGGATATGGTTGTCCTCCCATACAAGGAC
AGTTTATTACTATTCAGTAGGTATTTACAGCAGCTTGTCATGGAGTCTCTGGGGAAAGAG
TTTGACCTGGACGGTAACCGGGTGAATCAAGGGATCAGTGTTTATGGAAACAAAGGGAGC
ACAGATCAACATGCCTATATTCAACAACTACGAGAAGGTGTGCACAATTTCTTTGCAACA
TTTATTGAAGTATTGCGTGATAGGCCCCCTGGTCATGATTGGGAGCTTGAACCTGGTGTT
ACTTGTGGTGACTACCTCTTTGGAATGTTACAGGGAACAAGGTCAGCTCTGTATTCGAAT
GATCGGGAGTCCATCACAGTCACTGTGCAGGAAGTGACACCTAGATCTGTTGGAGCTCTA
GTAGCACTCTACGAGCGAGCTGTTGGGATTTATGCTTCACTTGTCAACATTAACGCTTAT
CATCAACCTGGTGTGGAAGCTGGGAAAAAAGCTGCTGGAGAAGTTCTTGCGCTTCAAAAG
CGTGTCCTTCAAGTACTTAATGAGGCCAGCTGTAAACAGCCTGTTGAACCACTTACTCTG
GATGAAATAGCTGAACGTTGCCATTGTGAAGACGATATTGAAATGATCTATAAGATTATT
GCACACATGGCTGCTAATGACAGAGCTCTTATTGCCGAAGGTAATTGTGGTACTCCTCAG
AGCATAAGAGTTTATCTGGGCGAGTGTAATGTTGACGAGTTATATGCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022866
PEP Infomation

pacid=37475206 transcript=PGSC0003DMT400033620 locus=PGSC0003DMG400012910 ID=PGSC0003DMT400033620.v4.03 annot-version=v4.03
Sequence

MASSSLSSIYSPSSSFKSEVKSIHKITSSQLGSIYLPNKSRFHVHAVAREVSASLSAGNN
DVVHKLKENVGLEKNPNALWKRYVDWLYQHKELGLYLDISRVGFTDGFLEEMEPRLQKAF
KDMVDLEKGAIANPDEGRMVGHYWLRSPHLAPNSFLRLQIENTLEAVCQFANDVVSGKIK
TPSGGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPEL
ASTLVIVISKSGGTPETRNGLLEVQKAFREAGLIFAKQGVAITQENSLLDNTSRIEGWLA
RFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGAALMDEANRTTVVRDNPAALLALC
WYWATDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGS
TDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYSN
DRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQK
RVLQVLNEASCKQPVEPLTLDEIAERCHCEDDIEMIYKIIAHMAANDRALIAEGNCGTPQ
SIRVYLGECNVDELYA*

Transcript Sequence

Transcript ID

PGSC0003DMT400033620
Transcript Infomation

pacid=37475206 locus=PGSC0003DMG400012910 ID=PGSC0003DMT400033620.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTTCTCTCTCTAGCATCTACTCACCTTCTTCATCTTTCAAATCTGAAGTG
AAATCCATTCACAAAATCACTTCTTCCCAATTGGGTTCAATTTATTTGCCCAATAAATCA
AGATTCCATGTTCACGCGGTGGCGCGTGAGGTTTCAGCGAGCTTGTCGGCCGGAAACAAT
GACGTTGTTCACAAGTTGAAGGAGAATGTTGGGTTGGAGAAAAACCCGAATGCTCTATGG
AAGAGATATGTTGACTGGCTTTATCAGCACAAGGAGTTGGGTTTGTATTTGGATATTAGT
CGAGTTGGATTCACTGATGGGTTTCTTGAGGAAATGGAGCCTCGTTTGCAAAAGGCGTTT
AAGGATATGGTGGATTTGGAGAAGGGAGCTATTGCAAACCCAGATGAGGGTAGAATGGTG
GGTCACTATTGGTTGAGAAGTCCTCATCTTGCTCCCAACTCATTTCTCAGGTTGCAGATT
GAGAATACTCTTGAAGCTGTTTGCCAGTTTGCAAATGATGTCGTCAGTGGTAAGATCAAG
ACTCCTTCTGGTGGCCGATTTACGCAAATTCTTTCCGTTGGAATTGGTGGTTCAGCTCTT
GGACCACAATTTGTGGCTGAGGCATTGGCACCTGACAACCCTCCTCTGAAGATAAGATTT
ATCGACAACACAGATCCAGCAGGCATTGATCATCAAATTGCGCAACTTGGCCCTGAGCTG
GCTTCAACACTTGTTATTGTTATTTCAAAGAGTGGAGGCACTCCAGAAACCCGAAATGGC
TTGCTAGAAGTTCAGAAGGCCTTCCGTGAAGCTGGCCTGATATTCGCAAAACAGGGTGTT
GCCATTACACAAGAAAACTCATTGCTTGACAACACTTCTAGAATTGAGGGTTGGTTGGCC
CGATTCCCTATGTTTGATTGGGTGGGTGGAAGAACCTCTGAAATGTCTGCAGTTGGTTTA
CTTCCAGCTGCACTTCAGGGAATTGATATTAGAGAGATGCTCGCTGGTGCTGCATTGATG
GACGAAGCAAACAGGACCACTGTGGTTCGGGATAACCCGGCAGCGCTACTAGCTTTGTGT
TGGTACTGGGCAACTGATGGAGTTGGATCCAAGGATATGGTTGTCCTCCCATACAAGGAC
AGTTTATTACTATTCAGTAGGTATTTACAGCAGCTTGTCATGGAGTCTCTGGGGAAAGAG
TTTGACCTGGACGGTAACCGGGTGAATCAAGGGATCAGTGTTTATGGAAACAAAGGGAGC
ACAGATCAACATGCCTATATTCAACAACTACGAGAAGGTGTGCACAATTTCTTTGCAACA
TTTATTGAAGTATTGCGTGATAGGCCCCCTGGTCATGATTGGGAGCTTGAACCTGGTGTT
ACTTGTGGTGACTACCTCTTTGGAATGTTACAGGGAACAAGGTCAGCTCTGTATTCGAAT
GATCGGGAGTCCATCACAGTCACTGTGCAGGAAGTGACACCTAGATCTGTTGGAGCTCTA
GTAGCACTCTACGAGCGAGCTGTTGGGATTTATGCTTCACTTGTCAACATTAACGCTTAT
CATCAACCTGGTGTGGAAGCTGGGAAAAAAGCTGCTGGAGAAGTTCTTGCGCTTCAAAAG
CGTGTCCTTCAAGTACTTAATGAGGCCAGCTGTAAACAGCCTGTTGAACCACTTACTCTG
GATGAAATAGCTGAACGTTGCCATTGTGAAGACGATATTGAAATGATCTATAAGATTATT
GCACACATGGCTGCTAATGACAGAGCTCTTATTGCCGAAGGTAATTGTGGTACTCCTCAG
AGCATAAGAGTTTATCTGGGCGAGTGTAATGTTGACGAGTTATATGCCTAG