Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033524
CDS Infomation

pacid=37456717 polypeptide=PGSC0003DMP400022808 locus=PGSC0003DMG400012878 ID=PGSC0003DMT400033524.v4.03 annot-version=v4.03
Sequence

ATGGACTTCAGTAAGATATCGCTGGAAATCTTCTCAAAACTGGAGCAGAAATGGTTGTAT
CACTACGAAGGGAAGAAAACTCGTGTTCTCAGTATTGATGGTGGTGGAACTACCGGCATT
GTTGCCGGTGCTGCATTGATACATCTCGAAAACCAGATCTGTGCTAAAACTGGTGATCCT
CACGTTAGAATTTCTGATTTCTTCGACATTGTTGTTGGTACTGGTATAGGTGCTATCTAC
GCTGCAATGCTTGTTGTTGATGGAGGCGACGGCCGTCCGTTGTTCACGGCGAAGGATGCC
GTGAAGTTTGTTAAGGAAAATCAGTCGAGGCTTTTTAAGGCTAAGAAAGTCGGTGTTCTC
CGTCGTAAGAAGAGGTTTTCAGGGAAGAGTATGGAGAAGGTGTTGAAGGAAGTGTTTAGA
AGAGAGGACGGCAAAGCGTTAACATTGAGGGACACGTGTAAGCCTCTACTTGTACCGTGC
TTTGACCTCAACAGTTCTGCGCCTTTCGTCTTCTCCAGAGCTGATGCTATCGAGTCCTTC
AGTTACGATTTTGATCTATGGAAAGTATGCCGTGCCACGTCAGCAAATCCGTCCATGTTC
AAGCCGTTTAATCTCGAGTCCATTGACGGAAAAACCTCTTGCCTCGCCGTTGACGGCGGT
CTCGTCATGAACAATCCCGCTGCTGCAGCCGTCACTCACGTTTTGCACAACAAACGAGAT
TTTCCTGCCGTCACCGGCGTCGATGACCTATTGGTTCTCTCTCTAGGTAACGGTCCGTTA
AACTCAACGACAAACTTGAAAATGAGAAATGATGGCTACTGCTCTCCATTATCCGTCGTC
GGAATTGTCTTCGACGGCGTTTCTGAAACCGTTGACCAAATGCTCGGAAACGCCTTCTGC
TGGAACCCCAATGATTACGTTAGAGTTCAGGCGACCGGGTATGCAAGTGGAGGAGTTGAG
GAGGCGTTAGAAGAAAGAGGAGTGGAGTCATTGCCATTTGGCGGTAAGCGGTTACTGACG
GAGACTAACGGACAGAGAATCGGGGGTTTGGTGCAACGCCTTGTTGCTACCGGAAGAAGT
AGTGTGCCGCCAAGTCCATGCAAGGATGTTGCCGTTAGTCCTCTAAGAAACGGACGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022808
PEP Infomation

pacid=37456717 transcript=PGSC0003DMT400033524 locus=PGSC0003DMG400012878 ID=PGSC0003DMT400033524.v4.03 annot-version=v4.03
Sequence

MDFSKISLEIFSKLEQKWLYHYEGKKTRVLSIDGGGTTGIVAGAALIHLENQICAKTGDP
HVRISDFFDIVVGTGIGAIYAAMLVVDGGDGRPLFTAKDAVKFVKENQSRLFKAKKVGVL
RRKKRFSGKSMEKVLKEVFRREDGKALTLRDTCKPLLVPCFDLNSSAPFVFSRADAIESF
SYDFDLWKVCRATSANPSMFKPFNLESIDGKTSCLAVDGGLVMNNPAAAAVTHVLHNKRD
FPAVTGVDDLLVLSLGNGPLNSTTNLKMRNDGYCSPLSVVGIVFDGVSETVDQMLGNAFC
WNPNDYVRVQATGYASGGVEEALEERGVESLPFGGKRLLTETNGQRIGGLVQRLVATGRS
SVPPSPCKDVAVSPLRNGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400033524
Transcript Infomation

pacid=37456717 locus=PGSC0003DMG400012878 ID=PGSC0003DMT400033524.v4.03 annot-version=v4.03
Sequence

ATGGACTTCAGTAAGATATCGCTGGAAATCTTCTCAAAACTGGAGCAGAAATGGTTGTAT
CACTACGAAGGGAAGAAAACTCGTGTTCTCAGTATTGATGGTGGTGGAACTACCGGCATT
GTTGCCGGTGCTGCATTGATACATCTCGAAAACCAGATCTGTGCTAAAACTGGTGATCCT
CACGTTAGAATTTCTGATTTCTTCGACATTGTTGTTGGTACTGGTATAGGTGCTATCTAC
GCTGCAATGCTTGTTGTTGATGGAGGCGACGGCCGTCCGTTGTTCACGGCGAAGGATGCC
GTGAAGTTTGTTAAGGAAAATCAGTCGAGGCTTTTTAAGGCTAAGAAAGTCGGTGTTCTC
CGTCGTAAGAAGAGGTTTTCAGGGAAGAGTATGGAGAAGGTGTTGAAGGAAGTGTTTAGA
AGAGAGGACGGCAAAGCGTTAACATTGAGGGACACGTGTAAGCCTCTACTTGTACCGTGC
TTTGACCTCAACAGTTCTGCGCCTTTCGTCTTCTCCAGAGCTGATGCTATCGAGTCCTTC
AGTTACGATTTTGATCTATGGAAAGTATGCCGTGCCACGTCAGCAAATCCGTCCATGTTC
AAGCCGTTTAATCTCGAGTCCATTGACGGAAAAACCTCTTGCCTCGCCGTTGACGGCGGT
CTCGTCATGAACAATCCCGCTGCTGCAGCCGTCACTCACGTTTTGCACAACAAACGAGAT
TTTCCTGCCGTCACCGGCGTCGATGACCTATTGGTTCTCTCTCTAGGTAACGGTCCGTTA
AACTCAACGACAAACTTGAAAATGAGAAATGATGGCTACTGCTCTCCATTATCCGTCGTC
GGAATTGTCTTCGACGGCGTTTCTGAAACCGTTGACCAAATGCTCGGAAACGCCTTCTGC
TGGAACCCCAATGATTACGTTAGAGTTCAGGCGACCGGGTATGCAAGTGGAGGAGTTGAG
GAGGCGTTAGAAGAAAGAGGAGTGGAGTCATTGCCATTTGGCGGTAAGCGGTTACTGACG
GAGACTAACGGACAGAGAATCGGGGGTTTGGTGCAACGCCTTGTTGCTACCGGAAGAAGT
AGTGTGCCGCCAAGTCCATGCAAGGATGTTGCCGTTAGTCCTCTAAGAAACGGACGTTAA