Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033471
CDS Infomation

pacid=37446136 polypeptide=PGSC0003DMP400022773 locus=PGSC0003DMG400012857 ID=PGSC0003DMT400033471.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGTGGATGCTCAAAATGGAGAAACAAGTTGTAGTTTTCTACTACAGCAGTTG
CAGCAAATTTGGGATGAGGTTGGTGAAACTGATGAAGATAGAGATAAGATGCTTCTTCAG
ATAGACCAGGAGTGCTTGGATGTTTACAATAGAAAAGTTGACCAAGCAGTGAAATCGCGG
GATCACCTTCTTCAGGCTTTGTCAGATGCCAAAGTTGAATTCTCCAGGCTGCTATCAGCC
CTTGGAGAGAAAACATATGATGGAATTCCTGAGAAGAATTCAGGATCAATCAAGGAACAA
CTTGCAGCTATAGCACCGGCACTGGAAAAACTGTGGAAACAGAAAGACGAAAGGGTAAAA
GAGTTCTTGGATGTACAATCACAAATCGAGAAGATTAGCAGCGAGATTGCAGGGACTAGT
GAGCAAGTAGAGAGTCCTAAAGTAGATGAATCTGATTTGTCTCTTAAAAAGCTGGATGAG
TTTCATGCACAGCTTCAAGATCTTCAAAAAGAAAAGAGTGAGAGACTGCACAAAGTCCTT
GAATTCGTGAGCACAATACATGATCTATGTGCCGTTCTCGGCATTGATTTCTTTAGTGCT
GTCACTGAAGTTCACCCAAGCCTGAATGATTCTACTGGTGTACAATCGAAAAGTATAAGC
AATGACACACTATCAAGTCTGGCTAGAACTGTCTTAGCACTAGAGGAAGATAAGAAGCAA
AGATTGCAGAAGCTCCAAGAACTTGCAACTCAACTGATTGATTTATGGAATTTGATGGAT
ACAACTGAAGAAGAACGGAGCTTGTTTGACCATGTCACCTGCAACATATCGGCTTCAGTT
GATGAAGTGTCCATTCCTGGAGCTCTTGCTCTTGATCTGATTGAACAGGCTGAAGTGGAA
GTTGAAAGACTTGATCAGCTAAAAGCTAGCAGGATGAAGGAGATTGCTTTCAAAAAGCAG
GCAGTGCTTGAAGAGATTTTCGCTTGTGCCCACATAGAGATTGACTCCGAGGCTGCTCAA
AACAAAATTATGGCACTAATTGATTCTGTTAATACTGAGTCTGCAGAGTTACTTGCGGAC
ATGGACAACCAGATTGTGAAAGCAAAAGAGGAGGCTGATAGCAGGAAAGAAATATTGGAT
AAAGTTGAAAAATGGATGGCATCTTGTGAAGAAGAGAGCTGGCTTGAAGACTACAACAGG
GATCAGAACCGGTATAATGCAAGCAGAGGTGCACACTTAAATTTGAAGAGGGCTGAAAAG
GCTCGGATATTGGTCGGCAAAATTCCAGCTCTTGTGGATTCCTTGATTGCCAAAACAAGA
GCATGGGAACAAGATCGCGACACCATATTCACATATGATGGTGTTCCACTTCTTGCCATG
CTAGATGAATATATGATGCTCAGGCAAGATAGAGAAGAAGAGAAACGAAAGTTGAGGGAC
CAGAAGAAGTTCCATGAGCAGATCAACGAACAAGAAACACCATTTGGATCAACACCAAGC
GCTGCTCGACCCCTCGGTACAAAGAAGGTGGTGGGTCCAGGAGCAAACGGGTCAGGCAAC
AGAAGGCTGTCTCTTAACTCACATCAAAATGGTTCCAGGTCAACAACTAAAGACGGGAAG
AGAGACCACTCGAGAACGGTTGCTCCTGTAAACTATGTAGCCATTTCAAAAGATGATGCA
GACTCTCACATTTCTGGAACTGAACATATTCCCAGCACACCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400022773
PEP Infomation

pacid=37446136 transcript=PGSC0003DMT400033471 locus=PGSC0003DMG400012857 ID=PGSC0003DMT400033471.v4.03 annot-version=v4.03
Sequence

MGGVDAQNGETSCSFLLQQLQQIWDEVGETDEDRDKMLLQIDQECLDVYNRKVDQAVKSR
DHLLQALSDAKVEFSRLLSALGEKTYDGIPEKNSGSIKEQLAAIAPALEKLWKQKDERVK
EFLDVQSQIEKISSEIAGTSEQVESPKVDESDLSLKKLDEFHAQLQDLQKEKSERLHKVL
EFVSTIHDLCAVLGIDFFSAVTEVHPSLNDSTGVQSKSISNDTLSSLARTVLALEEDKKQ
RLQKLQELATQLIDLWNLMDTTEEERSLFDHVTCNISASVDEVSIPGALALDLIEQAEVE
VERLDQLKASRMKEIAFKKQAVLEEIFACAHIEIDSEAAQNKIMALIDSVNTESAELLAD
MDNQIVKAKEEADSRKEILDKVEKWMASCEEESWLEDYNRDQNRYNASRGAHLNLKRAEK
ARILVGKIPALVDSLIAKTRAWEQDRDTIFTYDGVPLLAMLDEYMMLRQDREEEKRKLRD
QKKFHEQINEQETPFGSTPSAARPLGTKKVVGPGANGSGNRRLSLNSHQNGSRSTTKDGK
RDHSRTVAPVNYVAISKDDADSHISGTEHIPSTP*

Transcript Sequence

Transcript ID

PGSC0003DMT400033471
Transcript Infomation

pacid=37446136 locus=PGSC0003DMG400012857 ID=PGSC0003DMT400033471.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGTGGATGCTCAAAATGGAGAAACAAGTTGTAGTTTTCTACTACAGCAGTTG
CAGCAAATTTGGGATGAGGTTGGTGAAACTGATGAAGATAGAGATAAGATGCTTCTTCAG
ATAGACCAGGAGTGCTTGGATGTTTACAATAGAAAAGTTGACCAAGCAGTGAAATCGCGG
GATCACCTTCTTCAGGCTTTGTCAGATGCCAAAGTTGAATTCTCCAGGCTGCTATCAGCC
CTTGGAGAGAAAACATATGATGGAATTCCTGAGAAGAATTCAGGATCAATCAAGGAACAA
CTTGCAGCTATAGCACCGGCACTGGAAAAACTGTGGAAACAGAAAGACGAAAGGGTAAAA
GAGTTCTTGGATGTACAATCACAAATCGAGAAGATTAGCAGCGAGATTGCAGGGACTAGT
GAGCAAGTAGAGAGTCCTAAAGTAGATGAATCTGATTTGTCTCTTAAAAAGCTGGATGAG
TTTCATGCACAGCTTCAAGATCTTCAAAAAGAAAAGAGTGAGAGACTGCACAAAGTCCTT
GAATTCGTGAGCACAATACATGATCTATGTGCCGTTCTCGGCATTGATTTCTTTAGTGCT
GTCACTGAAGTTCACCCAAGCCTGAATGATTCTACTGGTGTACAATCGAAAAGTATAAGC
AATGACACACTATCAAGTCTGGCTAGAACTGTCTTAGCACTAGAGGAAGATAAGAAGCAA
AGATTGCAGAAGCTCCAAGAACTTGCAACTCAACTGATTGATTTATGGAATTTGATGGAT
ACAACTGAAGAAGAACGGAGCTTGTTTGACCATGTCACCTGCAACATATCGGCTTCAGTT
GATGAAGTGTCCATTCCTGGAGCTCTTGCTCTTGATCTGATTGAACAGGCTGAAGTGGAA
GTTGAAAGACTTGATCAGCTAAAAGCTAGCAGGATGAAGGAGATTGCTTTCAAAAAGCAG
GCAGTGCTTGAAGAGATTTTCGCTTGTGCCCACATAGAGATTGACTCCGAGGCTGCTCAA
AACAAAATTATGGCACTAATTGATTCTGTTAATACTGAGTCTGCAGAGTTACTTGCGGAC
ATGGACAACCAGATTGTGAAAGCAAAAGAGGAGGCTGATAGCAGGAAAGAAATATTGGAT
AAAGTTGAAAAATGGATGGCATCTTGTGAAGAAGAGAGCTGGCTTGAAGACTACAACAGG
GATCAGAACCGGTATAATGCAAGCAGAGGTGCACACTTAAATTTGAAGAGGGCTGAAAAG
GCTCGGATATTGGTCGGCAAAATTCCAGCTCTTGTGGATTCCTTGATTGCCAAAACAAGA
GCATGGGAACAAGATCGCGACACCATATTCACATATGATGGTGTTCCACTTCTTGCCATG
CTAGATGAATATATGATGCTCAGGCAAGATAGAGAAGAAGAGAAACGAAAGTTGAGGGAC
CAGAAGAAGTTCCATGAGCAGATCAACGAACAAGAAACACCATTTGGATCAACACCAAGC
GCTGCTCGACCCCTCGGTACAAAGAAGGTGGTGGGTCCAGGAGCAAACGGGTCAGGCAAC
AGAAGGCTGTCTCTTAACTCACATCAAAATGGTTCCAGGTCAACAACTAAAGACGGGAAG
AGAGACCACTCGAGAACGGTTGCTCCTGTAAACTATGTAGCCATTTCAAAAGATGATGCA
GACTCTCACATTTCTGGAACTGAACATATTCCCAGCACACCATAG