Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033463
CDS Infomation

pacid=37448559 polypeptide=PGSC0003DMP400022768 locus=PGSC0003DMG400012855 ID=PGSC0003DMT400033463.v4.03 annot-version=v4.03
Sequence

ATGTGGAATCTCCGGCGTCTCTCATACTTATTTGTGCTCCTCAGCTGCTTCTCAGTTACT
ACTCAAGCACTTAACAATGCAACCACTAAATGGCTCACACTACACGGAGATGCACCGTTA
GTTATAGCACGTGGTGGATTTTCTGGATTATTGCCTGATTCAAGCTATGATGCATATATT
ATGGCATTGGAAACTAGCTTGCCCAATGCGATTATTTGGTGTGATGTGCAACTCACTAAA
GATGGGGTTGGCATTTGTTTTCCTGACCTCAAGCTCGACAATGCTTCTGACATTGATTTT
TACTTCAAAAATAAGAAGAGTAAATACTTAGTGAATGGAGTACCAACACAAGGATGGTTC
TCTATAGATTACAATTTCAAAGATCTCGCGCCCGTCACTTTGAAGCAAGGAGTTTATTCA
CGAACTTCAAGATTTGATGGAACACAGCAAAGCATTCTTACTGTCCAGGATGTGGTAAAC
CAAGTGAAACCTCCGGGATTATGGTTGAACATCCAGCATGACAACTTCTTCAGCCAACAT
AATTTGAGTATGAGAAGTTATATTATATCCCTGTCCAGGAGTGTTCTGATCAACTATATT
TCATCGCCTGAGGTGAATTTCCTCAGAAGTATTCTGGCACGACTCAATTCACGAGTTACA
AAACTCGTTTTCCGATTTCTCGGACAGAATGATGTTGAGCCTTCAACAAATCAAACGTAT
GGTTCTTTATTGAAGAATCTCACATTTATCAAAACCTTTTCCTCTGGAATTCTTGTTCCC
AAATCTTATATCTGGCCGGTGGACAACTCCTTCTACTTACAACCATATACGTCACTTGTC
TTAGATGCTCATAAAGAAGGTCTTCAGATTTTTGCATCGGAGTTTGCAAATGATGTACCT
TTTGCTTACAATTACAGCTATGATCCCACATCTGAGTATTTGTCCTTTGTTGACAATGGC
AACTTCTCTGTTGATGGAGTACTGTCTGACTTCCCAGTAACTCCATCAGCGACAATAGAT
TGCTTTACTCATTTGGATAAGAATGATAAACCTCGAGAAAAGCTTCTGATTATCACATCT
GAAGGAGCAAGTGGAGACTACCCGGGTTGTACTGATTTGGCATATACAAAAGCTGCTTCG
GATGGTGCAGATGTTCTTGACTGTCCTGTTCAAATGACAAAGGATGGAATACCCTTCTGC
CTGGGCTCTATTAATTTGATAGATAAGACTACAGTTTTTCAATCGCTATTCACCAATATT
GCTAGTACTGTCCCAGAACTGAACATAACTAATGGAATAGTCACCTTTAACCTTACTTGG
GATGAGATTAATAGCCTGAAACCGGAAATAACAAACCCATGGTTAGAGTTTAGATTGTAC
CGAAATCCAAAAGCCAGAAATGAGGGAAACTTTGTTTCATTGGTGGATTTCTTGACATAT
GCAAAAAATGCCACAACTGTATCTGGTGTCATGATCAGCATAGAGAATGCAGCTTACCTG
GCAAATCAGGGATTTGGTGTAACTGATGCTGTTCGTGAAGCCTTAAGGAATGCTGGTTAT
AATAATCAGACAGTGAAGAAAGTTATGATCCAATCAAAAGACAGTTCAGTTCTGAAAGAA
TTTAAGAAAACCCGCTATGAACTTGTTTATAGGGTTGCTGATGATATCAGTGATATTGAG
AGCTCAACTATATCCGAGATCAAGAGCTTTGCTAGTTCTGTAATTTTAACCAAGAATTCT
GTTTTTCCAAGTGAGAGTAAATTTCTTGTTGGGAAAACAAATGTGGTGGAGAAACTGCAC
TCATCAAATCTCTCAGTATACGTTCAACGCTTTAACAATGAATTTGTGTCTCAAGCATGG
GATTTTTTCTCAGATTCATCTGTAGAGATAAACAATTATTTCATTGGAGCTGGCATTGAT
GGTGTTATAACAGATTTCCCTCGTACAGCTGCTAGATACAGAAGGAACCGTTGTTTGCGT
TACAAAGTCCCACCACTGTATTTTAGCCTTGTTAGTCCTGGAGTTCTCCTACAATTCATG
TCTCGTCAATCTTTGCCACCAGCAGAAGCTCCCAGCCCAATACTTACGGAAAGTGATGTG
GTTGAACCACCTCTACCTCCTGTTGCAAAGATAACCCCTACTGCTCGCAATGAGTCTACA
GCTAATGCAGCTCCCACCTCTCCAATCGGTCAATCCTCAGTTGTAGCTGGCGTTTTCACA
TGCTGCCTCACCATTCTTCTTGCTGATCTTGTCATCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022768
PEP Infomation

pacid=37448559 transcript=PGSC0003DMT400033463 locus=PGSC0003DMG400012855 ID=PGSC0003DMT400033463.v4.03 annot-version=v4.03
Sequence

MWNLRRLSYLFVLLSCFSVTTQALNNATTKWLTLHGDAPLVIARGGFSGLLPDSSYDAYI
MALETSLPNAIIWCDVQLTKDGVGICFPDLKLDNASDIDFYFKNKKSKYLVNGVPTQGWF
SIDYNFKDLAPVTLKQGVYSRTSRFDGTQQSILTVQDVVNQVKPPGLWLNIQHDNFFSQH
NLSMRSYIISLSRSVLINYISSPEVNFLRSILARLNSRVTKLVFRFLGQNDVEPSTNQTY
GSLLKNLTFIKTFSSGILVPKSYIWPVDNSFYLQPYTSLVLDAHKEGLQIFASEFANDVP
FAYNYSYDPTSEYLSFVDNGNFSVDGVLSDFPVTPSATIDCFTHLDKNDKPREKLLIITS
EGASGDYPGCTDLAYTKAASDGADVLDCPVQMTKDGIPFCLGSINLIDKTTVFQSLFTNI
ASTVPELNITNGIVTFNLTWDEINSLKPEITNPWLEFRLYRNPKARNEGNFVSLVDFLTY
AKNATTVSGVMISIENAAYLANQGFGVTDAVREALRNAGYNNQTVKKVMIQSKDSSVLKE
FKKTRYELVYRVADDISDIESSTISEIKSFASSVILTKNSVFPSESKFLVGKTNVVEKLH
SSNLSVYVQRFNNEFVSQAWDFFSDSSVEINNYFIGAGIDGVITDFPRTAARYRRNRCLR
YKVPPLYFSLVSPGVLLQFMSRQSLPPAEAPSPILTESDVVEPPLPPVAKITPTARNEST
ANAAPTSPIGQSSVVAGVFTCCLTILLADLVIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400033463
Transcript Infomation

pacid=37448559 locus=PGSC0003DMG400012855 ID=PGSC0003DMT400033463.v4.03 annot-version=v4.03
Sequence

ATGTGGAATCTCCGGCGTCTCTCATACTTATTTGTGCTCCTCAGCTGCTTCTCAGTTACT
ACTCAAGCACTTAACAATGCAACCACTAAATGGCTCACACTACACGGAGATGCACCGTTA
GTTATAGCACGTGGTGGATTTTCTGGATTATTGCCTGATTCAAGCTATGATGCATATATT
ATGGCATTGGAAACTAGCTTGCCCAATGCGATTATTTGGTGTGATGTGCAACTCACTAAA
GATGGGGTTGGCATTTGTTTTCCTGACCTCAAGCTCGACAATGCTTCTGACATTGATTTT
TACTTCAAAAATAAGAAGAGTAAATACTTAGTGAATGGAGTACCAACACAAGGATGGTTC
TCTATAGATTACAATTTCAAAGATCTCGCGCCCGTCACTTTGAAGCAAGGAGTTTATTCA
CGAACTTCAAGATTTGATGGAACACAGCAAAGCATTCTTACTGTCCAGGATGTGGTAAAC
CAAGTGAAACCTCCGGGATTATGGTTGAACATCCAGCATGACAACTTCTTCAGCCAACAT
AATTTGAGTATGAGAAGTTATATTATATCCCTGTCCAGGAGTGTTCTGATCAACTATATT
TCATCGCCTGAGGTGAATTTCCTCAGAAGTATTCTGGCACGACTCAATTCACGAGTTACA
AAACTCGTTTTCCGATTTCTCGGACAGAATGATGTTGAGCCTTCAACAAATCAAACGTAT
GGTTCTTTATTGAAGAATCTCACATTTATCAAAACCTTTTCCTCTGGAATTCTTGTTCCC
AAATCTTATATCTGGCCGGTGGACAACTCCTTCTACTTACAACCATATACGTCACTTGTC
TTAGATGCTCATAAAGAAGGTCTTCAGATTTTTGCATCGGAGTTTGCAAATGATGTACCT
TTTGCTTACAATTACAGCTATGATCCCACATCTGAGTATTTGTCCTTTGTTGACAATGGC
AACTTCTCTGTTGATGGAGTACTGTCTGACTTCCCAGTAACTCCATCAGCGACAATAGAT
TGCTTTACTCATTTGGATAAGAATGATAAACCTCGAGAAAAGCTTCTGATTATCACATCT
GAAGGAGCAAGTGGAGACTACCCGGGTTGTACTGATTTGGCATATACAAAAGCTGCTTCG
GATGGTGCAGATGTTCTTGACTGTCCTGTTCAAATGACAAAGGATGGAATACCCTTCTGC
CTGGGCTCTATTAATTTGATAGATAAGACTACAGTTTTTCAATCGCTATTCACCAATATT
GCTAGTACTGTCCCAGAACTGAACATAACTAATGGAATAGTCACCTTTAACCTTACTTGG
GATGAGATTAATAGCCTGAAACCGGAAATAACAAACCCATGGTTAGAGTTTAGATTGTAC
CGAAATCCAAAAGCCAGAAATGAGGGAAACTTTGTTTCATTGGTGGATTTCTTGACATAT
GCAAAAAATGCCACAACTGTATCTGGTGTCATGATCAGCATAGAGAATGCAGCTTACCTG
GCAAATCAGGGATTTGGTGTAACTGATGCTGTTCGTGAAGCCTTAAGGAATGCTGGTTAT
AATAATCAGACAGTGAAGAAAGTTATGATCCAATCAAAAGACAGTTCAGTTCTGAAAGAA
TTTAAGAAAACCCGCTATGAACTTGTTTATAGGGTTGCTGATGATATCAGTGATATTGAG
AGCTCAACTATATCCGAGATCAAGAGCTTTGCTAGTTCTGTAATTTTAACCAAGAATTCT
GTTTTTCCAAGTGAGAGTAAATTTCTTGTTGGGAAAACAAATGTGGTGGAGAAACTGCAC
TCATCAAATCTCTCAGTATACGTTCAACGCTTTAACAATGAATTTGTGTCTCAAGCATGG
GATTTTTTCTCAGATTCATCTGTAGAGATAAACAATTATTTCATTGGAGCTGGCATTGAT
GGTGTTATAACAGATTTCCCTCGTACAGCTGCTAGATACAGAAGGAACCGTTGTTTGCGT
TACAAAGTCCCACCACTGTATTTTAGCCTTGTTAGTCCTGGAGTTCTCCTACAATTCATG
TCTCGTCAATCTTTGCCACCAGCAGAAGCTCCCAGCCCAATACTTACGGAAAGTGATGTG
GTTGAACCACCTCTACCTCCTGTTGCAAAGATAACCCCTACTGCTCGCAATGAGTCTACA
GCTAATGCAGCTCCCACCTCTCCAATCGGTCAATCCTCAGTTGTAGCTGGCGTTTTCACA
TGCTGCCTCACCATTCTTCTTGCTGATCTTGTCATCTTTTGA