Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033455
CDS Infomation

pacid=37445605 polypeptide=PGSC0003DMP400022763 locus=PGSC0003DMG400012852 ID=PGSC0003DMT400033455.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATCTTCTTCTTCTCTTCACTCTGTGAAAATAATGCACGGACGCAAATTACTC
AACCGAATATTTTCATCTGTATACGGATTTGCCATTGTAGCTTTGTTCTACCACCATTTG
TTCACATTCACCGCACTTCACCTGCGCGGCCGCCTGTCAATTTTCATGTTGATATCCGAT
TTCATTCTGGCATTCATGTGGTTCACATCACAGTCATTCTTCATGAACCCAGTTACTCGT
CAACAGTTCCCTGAAAACCTCAAACAATGGGTGGACAATAAGGATTTTCCGGCGATTGAC
ATATTCATATGTACGGCGGATCCGTCCAAGGAGCCGCCGTTGACTACTGTTAACACGGTT
TTGTCTGTTTTGGCCTATGATTATCCGACGGAGAAGCTTTCCGCTTATGTATCGGATGAC
GGAGGATCGAAGCTCATTCTGTTTGCTCTAATGGAAGCGGCGGAATTTGCACGGAATTGG
GTGCCTTATTGCCGGGAAAATAAGATCGAGCAGAGGTGCCCGGAGGAGTATTTCCGGCGA
AACCATACTATAACTTCTCAATTTCAGATTATTGAGAATTTGTACTTGGACATGAAGATG
AGGATAGAGAATGTTGTTGAGAGAGGTGAGGTTGTTGATGAGTGTATTAGTGACCCACAA
CAACGTCAAGCTTTTAGCAAATGGACCAAAGGATTCACTCCCAAAGACCATCCTGCTATA
ATCCAGGTATTATTGGAAAGTGACAAAGATAAAGACATCAAAGGTTACTCAATTCCAAAT
CTCATTTATGTATCTAGAGAGAAAAGCACAACCTCACTTCATCATTTCAAGGCTGGGGCA
CTCAATGCTTTGCTCAGAGTCTCAGAAGCAATGACAAATGCACCAATAATTCTGACTCTT
GATTGTGACATGTACTCAAATGATCCTCAAACGCTTCAGCGAGTCCTTTGTTACTTTTGT
GATCCTTCAATTAGGTCTAAATTAGGGTATGTTCAATTCCCCCAACGATATCATGGACTC
AATGACGATGATTTATATGGAGGTGATAATGTACGTACATTCCGAATTTCACCTTCAGGC
TTGGATGGTCTTGGTGGCCCTGATAACTGTGGAACTGGCTGTTTTTTCAATCGTCGTGCT
CTTTTTGGTAGCCCATCATCAGTTACATCACTAGAACACTCTGGAGATAGTATGGCTATC
TCCAGTGTGTCAGTCGTTGAGATAGCTAGTCATGTTGCTAGCTGCAACTACGAGTACAAC
AACACCGAGTGGGGTACCAAGGTGGGGATCAAGTATGGAACACTTGTAGAAGACATATAC
ACAGGTTATATGATGCATTGTGAAGGGTGGGATTCAATATTTTGCGATACTGAAAGGCCT
GCATTTTTAGGTGAAGTACCGATTAATTTAGAAGATGTACTAAGCCAGGTTAAAAGATGG
GCTTTTGGACACCTTGAAGTTTTGTCCTGTAAATACAGTCCATTGACATTTGGAACCAAA
GCTCTGGGAATTTTGAGGGCTAGTTGCTACATACATTATGTTTTCTGGCCATTTTGGTGC
ATACCGGTCACTCTATATGCCTCCGTTCCACAACTAAGTCTCCTCAACAATATTTCCATC
TTTCCCAAGGTTTCTGATCCATGGTTCATCTTGTATGTCTTCCTATTCTTTGGTGCCTAT
GCACATGATTTTATACAATTCATATTGTTCAAAGGTACAACGAAAAGGTGGTGGAACGAC
CAAAGAATGTGGTACGTGAAGGCATTGTCACCTTTTCTTTTCGCCTCAATAGAGTACCTA
ACGAAAAAGTTAGGCATCACGACAAAAGGATTCAACGTTACAAGCAAAGTAGTAGGGCAG
GATGAAAGAAAAATGTATGATCAAAGCGTCTTCACATTTGGAATTCCTTCACCTATGTTT
GTGCCATTAGCAACAGTATCGATCATCAATCTGATCGCATTTGTCCGAGGAATCGTGACA
GTAATCTTTAGGATGGAAAGTTTAGACGAGTTATTCATCCAACTATTCATTGCTGGATTT
GCAGTTGTCAATTGCTTGCCGATTTACGAGGCAATGCTACTTAGATCTGATCATGGCAAA
ATGCCTGAGAGGATAGTTATTACTTCCTCTGTTCTTGCTGGGGTGCTCTGCATTGCATTT
TCCTTAATTGTAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022763
PEP Infomation

pacid=37445605 transcript=PGSC0003DMT400033455 locus=PGSC0003DMG400012852 ID=PGSC0003DMT400033455.v4.03 annot-version=v4.03
Sequence

MEESSSSLHSVKIMHGRKLLNRIFSSVYGFAIVALFYHHLFTFTALHLRGRLSIFMLISD
FILAFMWFTSQSFFMNPVTRQQFPENLKQWVDNKDFPAIDIFICTADPSKEPPLTTVNTV
LSVLAYDYPTEKLSAYVSDDGGSKLILFALMEAAEFARNWVPYCRENKIEQRCPEEYFRR
NHTITSQFQIIENLYLDMKMRIENVVERGEVVDECISDPQQRQAFSKWTKGFTPKDHPAI
IQVLLESDKDKDIKGYSIPNLIYVSREKSTTSLHHFKAGALNALLRVSEAMTNAPIILTL
DCDMYSNDPQTLQRVLCYFCDPSIRSKLGYVQFPQRYHGLNDDDLYGGDNVRTFRISPSG
LDGLGGPDNCGTGCFFNRRALFGSPSSVTSLEHSGDSMAISSVSVVEIASHVASCNYEYN
NTEWGTKVGIKYGTLVEDIYTGYMMHCEGWDSIFCDTERPAFLGEVPINLEDVLSQVKRW
AFGHLEVLSCKYSPLTFGTKALGILRASCYIHYVFWPFWCIPVTLYASVPQLSLLNNISI
FPKVSDPWFILYVFLFFGAYAHDFIQFILFKGTTKRWWNDQRMWYVKALSPFLFASIEYL
TKKLGITTKGFNVTSKVVGQDERKMYDQSVFTFGIPSPMFVPLATVSIINLIAFVRGIVT
VIFRMESLDELFIQLFIAGFAVVNCLPIYEAMLLRSDHGKMPERIVITSSVLAGVLCIAF
SLIVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400033455
Transcript Infomation

pacid=37445605 locus=PGSC0003DMG400012852 ID=PGSC0003DMT400033455.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATCTTCTTCTTCTCTTCACTCTGTGAAAATAATGCACGGACGCAAATTACTC
AACCGAATATTTTCATCTGTATACGGATTTGCCATTGTAGCTTTGTTCTACCACCATTTG
TTCACATTCACCGCACTTCACCTGCGCGGCCGCCTGTCAATTTTCATGTTGATATCCGAT
TTCATTCTGGCATTCATGTGGTTCACATCACAGTCATTCTTCATGAACCCAGTTACTCGT
CAACAGTTCCCTGAAAACCTCAAACAATGGGTGGACAATAAGGATTTTCCGGCGATTGAC
ATATTCATATGTACGGCGGATCCGTCCAAGGAGCCGCCGTTGACTACTGTTAACACGGTT
TTGTCTGTTTTGGCCTATGATTATCCGACGGAGAAGCTTTCCGCTTATGTATCGGATGAC
GGAGGATCGAAGCTCATTCTGTTTGCTCTAATGGAAGCGGCGGAATTTGCACGGAATTGG
GTGCCTTATTGCCGGGAAAATAAGATCGAGCAGAGGTGCCCGGAGGAGTATTTCCGGCGA
AACCATACTATAACTTCTCAATTTCAGATTATTGAGAATTTGTACTTGGACATGAAGATG
AGGATAGAGAATGTTGTTGAGAGAGGTGAGGTTGTTGATGAGTGTATTAGTGACCCACAA
CAACGTCAAGCTTTTAGCAAATGGACCAAAGGATTCACTCCCAAAGACCATCCTGCTATA
ATCCAGGTATTATTGGAAAGTGACAAAGATAAAGACATCAAAGGTTACTCAATTCCAAAT
CTCATTTATGTATCTAGAGAGAAAAGCACAACCTCACTTCATCATTTCAAGGCTGGGGCA
CTCAATGCTTTGCTCAGAGTCTCAGAAGCAATGACAAATGCACCAATAATTCTGACTCTT
GATTGTGACATGTACTCAAATGATCCTCAAACGCTTCAGCGAGTCCTTTGTTACTTTTGT
GATCCTTCAATTAGGTCTAAATTAGGGTATGTTCAATTCCCCCAACGATATCATGGACTC
AATGACGATGATTTATATGGAGGTGATAATGTACGTACATTCCGAATTTCACCTTCAGGC
TTGGATGGTCTTGGTGGCCCTGATAACTGTGGAACTGGCTGTTTTTTCAATCGTCGTGCT
CTTTTTGGTAGCCCATCATCAGTTACATCACTAGAACACTCTGGAGATAGTATGGCTATC
TCCAGTGTGTCAGTCGTTGAGATAGCTAGTCATGTTGCTAGCTGCAACTACGAGTACAAC
AACACCGAGTGGGGTACCAAGGTGGGGATCAAGTATGGAACACTTGTAGAAGACATATAC
ACAGGTTATATGATGCATTGTGAAGGGTGGGATTCAATATTTTGCGATACTGAAAGGCCT
GCATTTTTAGGTGAAGTACCGATTAATTTAGAAGATGTACTAAGCCAGGTTAAAAGATGG
GCTTTTGGACACCTTGAAGTTTTGTCCTGTAAATACAGTCCATTGACATTTGGAACCAAA
GCTCTGGGAATTTTGAGGGCTAGTTGCTACATACATTATGTTTTCTGGCCATTTTGGTGC
ATACCGGTCACTCTATATGCCTCCGTTCCACAACTAAGTCTCCTCAACAATATTTCCATC
TTTCCCAAGGTTTCTGATCCATGGTTCATCTTGTATGTCTTCCTATTCTTTGGTGCCTAT
GCACATGATTTTATACAATTCATATTGTTCAAAGGTACAACGAAAAGGTGGTGGAACGAC
CAAAGAATGTGGTACGTGAAGGCATTGTCACCTTTTCTTTTCGCCTCAATAGAGTACCTA
ACGAAAAAGTTAGGCATCACGACAAAAGGATTCAACGTTACAAGCAAAGTAGTAGGGCAG
GATGAAAGAAAAATGTATGATCAAAGCGTCTTCACATTTGGAATTCCTTCACCTATGTTT
GTGCCATTAGCAACAGTATCGATCATCAATCTGATCGCATTTGTCCGAGGAATCGTGACA
GTAATCTTTAGGATGGAAAGTTTAGACGAGTTATTCATCCAACTATTCATTGCTGGATTT
GCAGTTGTCAATTGCTTGCCGATTTACGAGGCAATGCTACTTAGATCTGATCATGGCAAA
ATGCCTGAGAGGATAGTTATTACTTCCTCTGTTCTTGCTGGGGTGCTCTGCATTGCATTT
TCCTTAATTGTAAGTTGA