Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033443
CDS Infomation

pacid=37449597 polypeptide=PGSC0003DMP400022753 locus=PGSC0003DMG400012848 ID=PGSC0003DMT400033443.v4.03 annot-version=v4.03
Sequence

ATGGCAACTGGTATAGCTTCAGGAAGCGGACAATTATATTTGAGGGAGCCTGTCTATCGG
AGGAATAGCTATGGAAAAGCTCAGTGTCATTCCACTGTGATCCTGAGCGGCATGCAAAAC
CAAATCCATTGGTCTTCTTGGATTTCCAAACTATTACAAGTTGATAGAAGTAACTATTCA
CAATGTCAAGTGAAAACAAACCGGAAGTTTCACAGAGGAACAATCAAATCATGCCAGAGA
GAAGGCTCAACTAGGTATTTTGATTTTGCTGTGATTGGTAGTGGCATTGCTGGCCTTCGA
TATGCTCTTGAGGTTGCCAAACATGGAACTGTGGCTGTGATAACCAAGGCCGAGCCTCAT
GAGAGTAACACTAACTATGCTCAAGGTGGTGTAAGTGCCGTGCTCTGCCCTAAGGATTCA
GTGGAGAGCCACATGCAAGATACAATTGTGGCAGGTGCTTACCTCTGTGATGAGGAGACT
GTTAGAGTTGTGTGTACTGAAGGACCTGAGAGAATTAAAGAACTGATTGCTATGGGTGCT
TCGTTCGATCATGGGGAGGATGGCAATCTGCATCTAGCCAGGGAAGGGGGCCACTCCCAT
CGCCGAATTGTCCATGCTGCTGATATGACAGGCAGAGAGATAGGAAGGGCCCTATTAGAG
GCAGTTGTTAAGGATCCTAATATATATGTGTTTCAACACCATTTTGCTATAGATTTGTTG
ACCACTCAGGATGGTTCTGACATAATTTGTCACGGCATTGATACTATAAACACGGAAACA
CAGGAGGTCATAAGATTCATTTCAAAAGTGACTTTACTGGCATCAGGTGGAGCTGGACAT
ATCTATCCAAGTACTACCAATCCGCCGGTTGCCACTGGAGATGGAATGGCTATGGCTCAT
CGAGCTCAAGCTGTAATTTCCAACATGGAGTTTGTGCAATTCCACCCGACTGCCTTGGCT
GATGAAGGCCTTCCCATCAGACCATCAAATGCCAGAGAGAATGCTTTTCTGATAACTGAA
GCTGTCAGAGGTGATGGAGGCATCCTTTACAACTTAGACATGGAGAGATTTATGCCATCG
TATGATGAAAGAGCAGAGCTCGCCCCGAGAGATGTGGTAGCAAGAAGTATTGATGACCAG
CTCAAAAAGCGTGGTGAAGAGTATGTTCTTCTTGATATCAGTCACAAGCCCACAGAGAAG
ATTCTTTCTCATTTTCCTAATATAGCTGCTGAGTGTCTCCGCTATGGGTTAGACATAACA
CAGCAGCCGATTCCAGTGGTTCCCGCAGCTCACTACATGTGTGGTGGAGTCCGTGCTGGG
CTTGAAGGTGAGACTAATGTACAAGGTCTTTATGTGGCAGGTGAAGTTGCATGTACTGGT
TTGCATGGTGCAAACCGACTTGCTAGCAACTCCTTGGCTGAAGCACTAGTGTTTGCACGA
AGAGCTGTACAGCCTTCAATTGATCACATGAACATATCTAAAATTGATCACAGTGCTTCA
AGTTGGTGGCCGCGGCCTGTAGCCCCCTTGTTACTAGGGGATACAGTACTTAACAAAGTC
ATTCGGCAGACAAGGGAAGTGAGGAAAGAACTGCAGTCAATCATGTGGGAATACGTTGGC
ATTGTAAGGTCTACCTCACGACTAACCCTTGCAGAGACGAGAATCATAGAGTTGGAGTTG
AAATGGGAAAGATACCTATTTCAGCATGGCTGGGAACCAACTATGGTTGGTTTAGAGGCT
TGCGAGATGAGGAATCTCTTCTGTTGTGCCAAGCTGGTTGTTAGCAGTGCCCTTTCCCGA
CATGAGAGTCGTGGGCTTCATTATACCATTGACTTTCCTCACGTCGAGGAAAGCAAGAGG
CTGCCAACGGTAATTTTTCCTTCACAGCTAAATAGCTCATGGAGCTCGCGGCAATTACAT
AAGCAGCAGATATGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022753
PEP Infomation

pacid=37449597 transcript=PGSC0003DMT400033443 locus=PGSC0003DMG400012848 ID=PGSC0003DMT400033443.v4.03 annot-version=v4.03
Sequence

MATGIASGSGQLYLREPVYRRNSYGKAQCHSTVILSGMQNQIHWSSWISKLLQVDRSNYS
QCQVKTNRKFHRGTIKSCQREGSTRYFDFAVIGSGIAGLRYALEVAKHGTVAVITKAEPH
ESNTNYAQGGVSAVLCPKDSVESHMQDTIVAGAYLCDEETVRVVCTEGPERIKELIAMGA
SFDHGEDGNLHLAREGGHSHRRIVHAADMTGREIGRALLEAVVKDPNIYVFQHHFAIDLL
TTQDGSDIICHGIDTINTETQEVIRFISKVTLLASGGAGHIYPSTTNPPVATGDGMAMAH
RAQAVISNMEFVQFHPTALADEGLPIRPSNARENAFLITEAVRGDGGILYNLDMERFMPS
YDERAELAPRDVVARSIDDQLKKRGEEYVLLDISHKPTEKILSHFPNIAAECLRYGLDIT
QQPIPVVPAAHYMCGGVRAGLEGETNVQGLYVAGEVACTGLHGANRLASNSLAEALVFAR
RAVQPSIDHMNISKIDHSASSWWPRPVAPLLLGDTVLNKVIRQTREVRKELQSIMWEYVG
IVRSTSRLTLAETRIIELELKWERYLFQHGWEPTMVGLEACEMRNLFCCAKLVVSSALSR
HESRGLHYTIDFPHVEESKRLPTVIFPSQLNSSWSSRQLHKQQIC*

Transcript Sequence

Transcript ID

PGSC0003DMT400033443
Transcript Infomation

pacid=37449597 locus=PGSC0003DMG400012848 ID=PGSC0003DMT400033443.v4.03 annot-version=v4.03
Sequence

ATGGCAACTGGTATAGCTTCAGGAAGCGGACAATTATATTTGAGGGAGCCTGTCTATCGG
AGGAATAGCTATGGAAAAGCTCAGTGTCATTCCACTGTGATCCTGAGCGGCATGCAAAAC
CAAATCCATTGGTCTTCTTGGATTTCCAAACTATTACAAGTTGATAGAAGTAACTATTCA
CAATGTCAAGTGAAAACAAACCGGAAGTTTCACAGAGGAACAATCAAATCATGCCAGAGA
GAAGGCTCAACTAGGTATTTTGATTTTGCTGTGATTGGTAGTGGCATTGCTGGCCTTCGA
TATGCTCTTGAGGTTGCCAAACATGGAACTGTGGCTGTGATAACCAAGGCCGAGCCTCAT
GAGAGTAACACTAACTATGCTCAAGGTGGTGTAAGTGCCGTGCTCTGCCCTAAGGATTCA
GTGGAGAGCCACATGCAAGATACAATTGTGGCAGGTGCTTACCTCTGTGATGAGGAGACT
GTTAGAGTTGTGTGTACTGAAGGACCTGAGAGAATTAAAGAACTGATTGCTATGGGTGCT
TCGTTCGATCATGGGGAGGATGGCAATCTGCATCTAGCCAGGGAAGGGGGCCACTCCCAT
CGCCGAATTGTCCATGCTGCTGATATGACAGGCAGAGAGATAGGAAGGGCCCTATTAGAG
GCAGTTGTTAAGGATCCTAATATATATGTGTTTCAACACCATTTTGCTATAGATTTGTTG
ACCACTCAGGATGGTTCTGACATAATTTGTCACGGCATTGATACTATAAACACGGAAACA
CAGGAGGTCATAAGATTCATTTCAAAAGTGACTTTACTGGCATCAGGTGGAGCTGGACAT
ATCTATCCAAGTACTACCAATCCGCCGGTTGCCACTGGAGATGGAATGGCTATGGCTCAT
CGAGCTCAAGCTGTAATTTCCAACATGGAGTTTGTGCAATTCCACCCGACTGCCTTGGCT
GATGAAGGCCTTCCCATCAGACCATCAAATGCCAGAGAGAATGCTTTTCTGATAACTGAA
GCTGTCAGAGGTGATGGAGGCATCCTTTACAACTTAGACATGGAGAGATTTATGCCATCG
TATGATGAAAGAGCAGAGCTCGCCCCGAGAGATGTGGTAGCAAGAAGTATTGATGACCAG
CTCAAAAAGCGTGGTGAAGAGTATGTTCTTCTTGATATCAGTCACAAGCCCACAGAGAAG
ATTCTTTCTCATTTTCCTAATATAGCTGCTGAGTGTCTCCGCTATGGGTTAGACATAACA
CAGCAGCCGATTCCAGTGGTTCCCGCAGCTCACTACATGTGTGGTGGAGTCCGTGCTGGG
CTTGAAGGTGAGACTAATGTACAAGGTCTTTATGTGGCAGGTGAAGTTGCATGTACTGGT
TTGCATGGTGCAAACCGACTTGCTAGCAACTCCTTGGCTGAAGCACTAGTGTTTGCACGA
AGAGCTGTACAGCCTTCAATTGATCACATGAACATATCTAAAATTGATCACAGTGCTTCA
AGTTGGTGGCCGCGGCCTGTAGCCCCCTTGTTACTAGGGGATACAGTACTTAACAAAGTC
ATTCGGCAGACAAGGGAAGTGAGGAAAGAACTGCAGTCAATCATGTGGGAATACGTTGGC
ATTGTAAGGTCTACCTCACGACTAACCCTTGCAGAGACGAGAATCATAGAGTTGGAGTTG
AAATGGGAAAGATACCTATTTCAGCATGGCTGGGAACCAACTATGGTTGGTTTAGAGGCT
TGCGAGATGAGGAATCTCTTCTGTTGTGCCAAGCTGGTTGTTAGCAGTGCCCTTTCCCGA
CATGAGAGTCGTGGGCTTCATTATACCATTGACTTTCCTCACGTCGAGGAAAGCAAGAGG
CTGCCAACGGTAATTTTTCCTTCACAGCTAAATAGCTCATGGAGCTCGCGGCAATTACAT
AAGCAGCAGATATGTTAG