Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033380
CDS Infomation

pacid=37463886 polypeptide=PGSC0003DMP400022706 locus=PGSC0003DMG400012823 ID=PGSC0003DMT400033380.v4.03 annot-version=v4.03
Sequence

ATGACTACAGGGTCATTGGGTCTTCGTTCTTCAGGAAGTTATGGTTCTTTGCAACAACAA
CTATTTCAGAATAGTTCATCACCAATCCAAACAACACCCCCTATTCCAAGAAAGCCCCCA
AAATTGTTTAAGGAGAAAGAGGGATTGTTTCTCTGGATCTGCAAATTCGCCCCTCGAAAG
AATGTTGGGATGTTGCTACTCTGTGTTGTTTCTGCTGCAGCTTTTCTGTGGGTCTTGTAT
GTTGGCAAAGGTGAAGTTGCAGTAGAACAAAGTAATAGGATGTTTGCTCCAGAAACTGTA
CATAAATATACTTTTAGGGGTATTGAGTCTATACAAAAAAATAATGTTGGCCAAAGTGCG
TCAACCGTCCAACCTCCTCCTCCCCCTCTTCCTCCTTCTCCTCCTGTATATTTCAAAGGA
TACACTCTTCCCCCTGGAAATCCATGTGAAGGCTTCACATTGCCGCCCCCGCCAGCAGAT
AAAAAGAGGACTGGACCACGGCCATGTCCGGTATGCTACCTTCCTGTTGAACAAGCTATT
GCATTAATGCCTGATGCACCATCCTTTTCTCCTGGTGTTAGCAATTTGACTTACATCCAT
GAAGAAAATCAGAGTAAAACCGAGTTTGGAGGTTCAGATTTCGGCGGATATCCTTCATTG
ATTCAGAGGAATGATTCGTATGACATAAGAGAGTCGATGAATGTGCATTGTGGTTTTGTC
AGAGGAATCAGGCCTGGACATCAGACAGGTTTTGACATTGATGATTCTGACCTTCTTGAG
ATGGAGTCTTGTCAAGGTGTCGTGGTGGCATCGGCAATATTTGGGGCTTTTGATTTGATA
CGGCAACCAAAGAATACCAGTGAATATGCAAAGAAAAATGTCTGCTTCTATATGTTCGTG
GATGAGCAAACAGAAGCATTTTTGAGAAATTCAAGTGAGCTGAATAGTAGCATGAGAATT
GGTTTATGGAGAATTGTTGTTGTTCATAACCTACCTTATGACGATCCGAGGCGAAATGGG
AAGGTCCCGAAGCTTCTACTCCACAGGCTTTTTCCTAATGCTCGTTATTCTCTATGGATT
GATGGAAAACTTGAGCTTGTCGTGGATCCATATCAAATACTTGAAAGGTTCTTGTGGAGA
AAAAATGCAAGCTTTGCAATATCAAGGCACTACAAGCGTTTTGATGTTTTTGTAGAAGCA
GAAGCGAATAAGGCAGCTGCAAAGTTTGATAATACTTCCATCGATTTCCAGGTTGACTTC
TATAAAAAGGAAGGACTAACTCCGTATTCCCGGGCTAAACTTCCTATTACAAGTGATGTC
CCTGAGGGATGTGTAATAATAAGGGAGCACATTCCGATCTCCAATCTCTTTACTTGTCTT
TGGTTTAATGAAGTGGACCGTTTTACTCCAAGAGACCAAATAAGCTTTGCCATTGTAAGA
GATAAGATCATGTCAAAGATAAATTGGACTGTGAATATGTTCTTAGACTGCGAACGGCGT
AACTTTGTGATTCAGGGGTATCACAGAGACATTCTTGGTCGCCTGACTCCACCTCGTGCA
AGTATAATCGTTCATCCTCCACGTCCTGTAATTCTTGAAACCCGGCATACCTCACCATTT
GTTCCAACATCAACTGTCATAACCACTCCAATCAAAAAGATTCCCACGAAGCGTGGGAGA
GAGAGGAAATCCAAGCGTCATAGAAAAGTCATTGCTGGAAATAAAGATCCTAATTTCAAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400022706
PEP Infomation

pacid=37463886 transcript=PGSC0003DMT400033380 locus=PGSC0003DMG400012823 ID=PGSC0003DMT400033380.v4.03 annot-version=v4.03
Sequence

MTTGSLGLRSSGSYGSLQQQLFQNSSSPIQTTPPIPRKPPKLFKEKEGLFLWICKFAPRK
NVGMLLLCVVSAAAFLWVLYVGKGEVAVEQSNRMFAPETVHKYTFRGIESIQKNNVGQSA
STVQPPPPPLPPSPPVYFKGYTLPPGNPCEGFTLPPPPADKKRTGPRPCPVCYLPVEQAI
ALMPDAPSFSPGVSNLTYIHEENQSKTEFGGSDFGGYPSLIQRNDSYDIRESMNVHCGFV
RGIRPGHQTGFDIDDSDLLEMESCQGVVVASAIFGAFDLIRQPKNTSEYAKKNVCFYMFV
DEQTEAFLRNSSELNSSMRIGLWRIVVVHNLPYDDPRRNGKVPKLLLHRLFPNARYSLWI
DGKLELVVDPYQILERFLWRKNASFAISRHYKRFDVFVEAEANKAAAKFDNTSIDFQVDF
YKKEGLTPYSRAKLPITSDVPEGCVIIREHIPISNLFTCLWFNEVDRFTPRDQISFAIVR
DKIMSKINWTVNMFLDCERRNFVIQGYHRDILGRLTPPRASIIVHPPRPVILETRHTSPF
VPTSTVITTPIKKIPTKRGRERKSKRHRKVIAGNKDPNFN*

Transcript Sequence

Transcript ID

PGSC0003DMT400033380
Transcript Infomation

pacid=37463886 locus=PGSC0003DMG400012823 ID=PGSC0003DMT400033380.v4.03 annot-version=v4.03
Sequence

ATGACTACAGGGTCATTGGGTCTTCGTTCTTCAGGAAGTTATGGTTCTTTGCAACAACAA
CTATTTCAGAATAGTTCATCACCAATCCAAACAACACCCCCTATTCCAAGAAAGCCCCCA
AAATTGTTTAAGGAGAAAGAGGGATTGTTTCTCTGGATCTGCAAATTCGCCCCTCGAAAG
AATGTTGGGATGTTGCTACTCTGTGTTGTTTCTGCTGCAGCTTTTCTGTGGGTCTTGTAT
GTTGGCAAAGGTGAAGTTGCAGTAGAACAAAGTAATAGGATGTTTGCTCCAGAAACTGTA
CATAAATATACTTTTAGGGGTATTGAGTCTATACAAAAAAATAATGTTGGCCAAAGTGCG
TCAACCGTCCAACCTCCTCCTCCCCCTCTTCCTCCTTCTCCTCCTGTATATTTCAAAGGA
TACACTCTTCCCCCTGGAAATCCATGTGAAGGCTTCACATTGCCGCCCCCGCCAGCAGAT
AAAAAGAGGACTGGACCACGGCCATGTCCGGTATGCTACCTTCCTGTTGAACAAGCTATT
GCATTAATGCCTGATGCACCATCCTTTTCTCCTGGTGTTAGCAATTTGACTTACATCCAT
GAAGAAAATCAGAGTAAAACCGAGTTTGGAGGTTCAGATTTCGGCGGATATCCTTCATTG
ATTCAGAGGAATGATTCGTATGACATAAGAGAGTCGATGAATGTGCATTGTGGTTTTGTC
AGAGGAATCAGGCCTGGACATCAGACAGGTTTTGACATTGATGATTCTGACCTTCTTGAG
ATGGAGTCTTGTCAAGGTGTCGTGGTGGCATCGGCAATATTTGGGGCTTTTGATTTGATA
CGGCAACCAAAGAATACCAGTGAATATGCAAAGAAAAATGTCTGCTTCTATATGTTCGTG
GATGAGCAAACAGAAGCATTTTTGAGAAATTCAAGTGAGCTGAATAGTAGCATGAGAATT
GGTTTATGGAGAATTGTTGTTGTTCATAACCTACCTTATGACGATCCGAGGCGAAATGGG
AAGGTCCCGAAGCTTCTACTCCACAGGCTTTTTCCTAATGCTCGTTATTCTCTATGGATT
GATGGAAAACTTGAGCTTGTCGTGGATCCATATCAAATACTTGAAAGGTTCTTGTGGAGA
AAAAATGCAAGCTTTGCAATATCAAGGCACTACAAGCGTTTTGATGTTTTTGTAGAAGCA
GAAGCGAATAAGGCAGCTGCAAAGTTTGATAATACTTCCATCGATTTCCAGGTTGACTTC
TATAAAAAGGAAGGACTAACTCCGTATTCCCGGGCTAAACTTCCTATTACAAGTGATGTC
CCTGAGGGATGTGTAATAATAAGGGAGCACATTCCGATCTCCAATCTCTTTACTTGTCTT
TGGTTTAATGAAGTGGACCGTTTTACTCCAAGAGACCAAATAAGCTTTGCCATTGTAAGA
GATAAGATCATGTCAAAGATAAATTGGACTGTGAATATGTTCTTAGACTGCGAACGGCGT
AACTTTGTGATTCAGGGGTATCACAGAGACATTCTTGGTCGCCTGACTCCACCTCGTGCA
AGTATAATCGTTCATCCTCCACGTCCTGTAATTCTTGAAACCCGGCATACCTCACCATTT
GTTCCAACATCAACTGTCATAACCACTCCAATCAAAAAGATTCCCACGAAGCGTGGGAGA
GAGAGGAAATCCAAGCGTCATAGAAAAGTCATTGCTGGAAATAAAGATCCTAATTTCAAT
TAA