Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033370
CDS Infomation

pacid=37462061 polypeptide=PGSC0003DMP400022699 locus=PGSC0003DMG400012819 ID=PGSC0003DMT400033370.v4.03 annot-version=v4.03
Sequence

ATGGCGTTCACACTTACTCTCACTCACTCTCCGACCAATTCAATCTCACCGGAAACCAAT
TCCGCAATCAGAAAATGTCCTTTGTTCATCCGGAACTTATACTTCACACCTTACAGAAAC
CGTCGTCGTTCCATTTCATGCTCGGCGCAACAGAAGCCGTTTAAGCCGATGACAGAGGAA
AATATTCTCGAGGCAGTAGCTGATTTCGACGGAGATGAGAAATTTGTACCTTGTTTAAGA
ACTTATGAGAACGATTTAGCTCGACTCACATTGGTTGGTGCTGTTGACTTCCAGCAGGCA
CTCACTGCTGCTGCGGCGGACGGTGGTGAAGCTGCTGGAGAACATATTGCCGCTGGTATG
GATGCTATGGTTGTTGAAACATTGTTTCCGGGACCTTCTGATGAGCATAGTACTATTTCT
ACTAGACTGTTCTTACCAGCAAGAAAAGTTATGGAGAAAGCCCATAAGCTTAGAAGTACC
ATAACTAAAGAGATGCTTTCCGGGACGACGTCTACAAATATACTTGCCATGACATTTAGA
CAAGTAACGTTGCAACATCTTTGGAACTTTGAACTAGTACTTTTTATACCAGGAACAGAA
AGGAATATGGATGATCTTGAAACACCAAGAGAGGTACCTCCATCTTTTGCCATCAAGTCA
TCAGATGAACGAGTCATTTCTGTTATTGCAGAAGTTATTTGTCTTTCTGCTCTCGAAAGC
ACAAAAAAACATTTCTTTAATGGAACTCCTGGTGGAGCCGCAAAGAAATTTTTCCCCTGG
TTTGACACACATAAAAGCATTGTCTCAAAAGATTCCTCTGTTACTCTATACAACTTAATG
GAATATGAGATAGTTGCAAATGCCAATGTTTTGCTCCAGAAATTTTCTTCCGAAAGGGCG
AATTACAGACCAAGGGAGGGAAGATGGATGGGCAATTGGTTAACTTCAACTGCATACTCC
AAACTGGAACAAATTGGAGGCCCTGAATTTATTACTTGGCTGAGTGAGTGTGTACCTGCT
TACAAATTGCAGATTGATGCTGAGAAACTTGACAAAGTGAAATTTGAAGGGTGGAAGGAA
ACAACAACAAACACATGGGAGGTTTTTCTGACTCACTCCCAAATGGTTGGTCTAAGTGAC
ATTCTAGATATGTATTATGAAGATGTCTATACACTTCCCTACAAACAATTATCATCGGGT
GTTATTGCAAAATCTTTCAATTCGCCATCTAGCAAGAGAAGCATTTCTATGTCAAAGGCA
ATCTCTATGGTCCTTGCAAGTGGAATTTTTCTTGTTGCTATAAGAATTCTTGGTCAACGT
TATCTTCCTTATCTCCCGATTAGAAAGCACTATCATCCGGATGTTAATCCAGTCAATTCA
TCTGACATGATCTCTATTCAGCCTCAGTCCATGGAATCTTGCAAGTTGGAAGATTACTGT
GTCTCCATTGTTAGGAGAATCAAGGAATTTTATTGTTGGCCTGGAGATGTAGTGATGGGT
TCTGGCAGCTCTGCTTGGATTGGGGAGCTTCCAATATACCTGAAGAATGAGATGGATTCC
AAAGTGTTAGATCTCAATTCCAGCTCCACGCCATCGGAAGGAATTGAAGATGAGATGAAA
GCAGCTGCACAAGATATTGCCAGTTATCAGGTTGTTTTATCTGGGGATGGTAAAATTGTT
GGATTCCAGCCTACAAGTCGTGTTGCTGAAAGTCAATGGGATGCAAACCCTTTAGTGAAA
GAGCTCTATGGAAAGGAAAAGCTTTCTCCCGACTTGATAGAACAAGGTCTCAAAATAAGC
CGCTCCAGTGATGCTGTTGTACTGGAATTATTGATGTCAACGAATCCCCAAAGTTCATTT
GCTTTGGTAAGACCAGTTACTGAAAATAGTAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022699
PEP Infomation

pacid=37462061 transcript=PGSC0003DMT400033370 locus=PGSC0003DMG400012819 ID=PGSC0003DMT400033370.v4.03 annot-version=v4.03
Sequence

MAFTLTLTHSPTNSISPETNSAIRKCPLFIRNLYFTPYRNRRRSISCSAQQKPFKPMTEE
NILEAVADFDGDEKFVPCLRTYENDLARLTLVGAVDFQQALTAAAADGGEAAGEHIAAGM
DAMVVETLFPGPSDEHSTISTRLFLPARKVMEKAHKLRSTITKEMLSGTTSTNILAMTFR
QVTLQHLWNFELVLFIPGTERNMDDLETPREVPPSFAIKSSDERVISVIAEVICLSALES
TKKHFFNGTPGGAAKKFFPWFDTHKSIVSKDSSVTLYNLMEYEIVANANVLLQKFSSERA
NYRPREGRWMGNWLTSTAYSKLEQIGGPEFITWLSECVPAYKLQIDAEKLDKVKFEGWKE
TTTNTWEVFLTHSQMVGLSDILDMYYEDVYTLPYKQLSSGVIAKSFNSPSSKRSISMSKA
ISMVLASGIFLVAIRILGQRYLPYLPIRKHYHPDVNPVNSSDMISIQPQSMESCKLEDYC
VSIVRRIKEFYCWPGDVVMGSGSSAWIGELPIYLKNEMDSKVLDLNSSSTPSEGIEDEMK
AAAQDIASYQVVLSGDGKIVGFQPTSRVAESQWDANPLVKELYGKEKLSPDLIEQGLKIS
RSSDAVVLELLMSTNPQSSFALVRPVTENSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400033370
Transcript Infomation

pacid=37462061 locus=PGSC0003DMG400012819 ID=PGSC0003DMT400033370.v4.03 annot-version=v4.03
Sequence

ATGGCGTTCACACTTACTCTCACTCACTCTCCGACCAATTCAATCTCACCGGAAACCAAT
TCCGCAATCAGAAAATGTCCTTTGTTCATCCGGAACTTATACTTCACACCTTACAGAAAC
CGTCGTCGTTCCATTTCATGCTCGGCGCAACAGAAGCCGTTTAAGCCGATGACAGAGGAA
AATATTCTCGAGGCAGTAGCTGATTTCGACGGAGATGAGAAATTTGTACCTTGTTTAAGA
ACTTATGAGAACGATTTAGCTCGACTCACATTGGTTGGTGCTGTTGACTTCCAGCAGGCA
CTCACTGCTGCTGCGGCGGACGGTGGTGAAGCTGCTGGAGAACATATTGCCGCTGGTATG
GATGCTATGGTTGTTGAAACATTGTTTCCGGGACCTTCTGATGAGCATAGTACTATTTCT
ACTAGACTGTTCTTACCAGCAAGAAAAGTTATGGAGAAAGCCCATAAGCTTAGAAGTACC
ATAACTAAAGAGATGCTTTCCGGGACGACGTCTACAAATATACTTGCCATGACATTTAGA
CAAGTAACGTTGCAACATCTTTGGAACTTTGAACTAGTACTTTTTATACCAGGAACAGAA
AGGAATATGGATGATCTTGAAACACCAAGAGAGGTACCTCCATCTTTTGCCATCAAGTCA
TCAGATGAACGAGTCATTTCTGTTATTGCAGAAGTTATTTGTCTTTCTGCTCTCGAAAGC
ACAAAAAAACATTTCTTTAATGGAACTCCTGGTGGAGCCGCAAAGAAATTTTTCCCCTGG
TTTGACACACATAAAAGCATTGTCTCAAAAGATTCCTCTGTTACTCTATACAACTTAATG
GAATATGAGATAGTTGCAAATGCCAATGTTTTGCTCCAGAAATTTTCTTCCGAAAGGGCG
AATTACAGACCAAGGGAGGGAAGATGGATGGGCAATTGGTTAACTTCAACTGCATACTCC
AAACTGGAACAAATTGGAGGCCCTGAATTTATTACTTGGCTGAGTGAGTGTGTACCTGCT
TACAAATTGCAGATTGATGCTGAGAAACTTGACAAAGTGAAATTTGAAGGGTGGAAGGAA
ACAACAACAAACACATGGGAGGTTTTTCTGACTCACTCCCAAATGGTTGGTCTAAGTGAC
ATTCTAGATATGTATTATGAAGATGTCTATACACTTCCCTACAAACAATTATCATCGGGT
GTTATTGCAAAATCTTTCAATTCGCCATCTAGCAAGAGAAGCATTTCTATGTCAAAGGCA
ATCTCTATGGTCCTTGCAAGTGGAATTTTTCTTGTTGCTATAAGAATTCTTGGTCAACGT
TATCTTCCTTATCTCCCGATTAGAAAGCACTATCATCCGGATGTTAATCCAGTCAATTCA
TCTGACATGATCTCTATTCAGCCTCAGTCCATGGAATCTTGCAAGTTGGAAGATTACTGT
GTCTCCATTGTTAGGAGAATCAAGGAATTTTATTGTTGGCCTGGAGATGTAGTGATGGGT
TCTGGCAGCTCTGCTTGGATTGGGGAGCTTCCAATATACCTGAAGAATGAGATGGATTCC
AAAGTGTTAGATCTCAATTCCAGCTCCACGCCATCGGAAGGAATTGAAGATGAGATGAAA
GCAGCTGCACAAGATATTGCCAGTTATCAGGTTGTTTTATCTGGGGATGGTAAAATTGTT
GGATTCCAGCCTACAAGTCGTGTTGCTGAAAGTCAATGGGATGCAAACCCTTTAGTGAAA
GAGCTCTATGGAAAGGAAAAGCTTTCTCCCGACTTGATAGAACAAGGTCTCAAAATAAGC
CGCTCCAGTGATGCTGTTGTACTGGAATTATTGATGTCAACGAATCCCCAAAGTTCATTT
GCTTTGGTAAGACCAGTTACTGAAAATAGTAGATGA