Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033356
CDS Infomation

pacid=37463309 polypeptide=PGSC0003DMP400022690 locus=PGSC0003DMG400012813 ID=PGSC0003DMT400033356.v4.03 annot-version=v4.03
Sequence

ATGGACGAGGAAGCTAATTCTTGGATTAGGAGAACGAAATTTTCTCATACCATTTGTCAT
AGGTTGGATGCAGCTAGATTGTCCAGTAGCCCTGTCAGTTTTCAGCCTAGAAGTATTACA
GGTGCCAAAACTAGACCTGGAACAGCTTCTCTTAATTCAAGACCTGATCCAACTGTTAAG
CAAATTCAGCAAAACCCGAGTACAAATAAGCAGAGGGCTTTATCCCCTCTTCCGAAAACC
AAACTTCCCGATACCTTTAAGGAAGCTCGATCTGATCAGAGGAGATTTTCGACTCCACAT
CCACAAAGGAAGGGACATGAGAAGGGCATTGTGGGTAAGTTGTTCCTCAAAGATTCTCAT
GAAAAGAAAATAGCTAGTTCCGGTTCTGCTATTTCAAAGTCAGCAGCGAAGTTCAATGAC
AAATCAAAGAACCGGAACCGGAAAGATTCTGCATGGACAAAGTACTTTGATCACAATGGG
CGCAGGGTTACGGCTGTAGAAACAGCTGATGAGTATACTGTTGATCTTTCCAAGCTATTT
CTTGGGCTTAGATTTGCTCATGGTGCGCATAGTCAGCTTTACCATGGAATATACAGGGAT
GAACCTGTTGCTGTGAAAATGATAAAACTACCTGATGATGACGAAAATGGAGCTTTAGCA
ACTCGGTTGGAGAATCAGTTTACCAGAGAAGTTACTCTGTTGTCTCAACTCCACCATCAA
AATGTCGTAAAGTTTGTAGGAGCATGCAGAAAGACACCAGTTTTTTGTGTTGTCACTGAG
TATCTATCTGAGGGTTCTTTGAGAGCACACCTTCACAAGCTTGAGGACAAGTCCCTGACC
TTGCAAAAACTGATTGCACTGGCCTTGGATATTGCTCATGGGATGCAATATATTCACTCA
CAAGGCATTATTCATAGGGATCTCAAACCGGAAAATATACTTATCGATGAGAACTTCCAC
CTTAAAATTGCAGATTTTGGAATTGCTTGTGAGGAAGCATATTGTGATCTTTTGGCTGAT
GATCCAGGTACTTACCGATGGATGGCACCTGAGATGATTAAACGAAAATCATATGGACGG
AAGGTGGATGTGTATAGTTTTGGACTCATTTTATGGGAAATGGTGGCCGGAACCGTTCCT
TATGAAGACATGACACCAGTACAGGCTGCTTTTGCTGTTGTGAACAAGAATATGAGACCA
CCTATTCCTGGGGCCTGCCCTCTTGCCATGAGAACTTTGATCGAACAGTGTTGGTCTTTG
CAACCAGAAAAGAGGCCTGAGTTTTGGCAGATCGTGAAGGTACTGGAGCAGTTTGAATCT
TCAGTTGCGCAAGATGGGACTCTGAATCTAGTACAAAATTCAATGTTTCATCACAAGAAG
GGGTTTCTTCATTGGATCCAAAAACTTGGATCCGTACATCAAAATGCTTCATCAAAGTCT
AAGGCTTTCTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022690
PEP Infomation

pacid=37463309 transcript=PGSC0003DMT400033356 locus=PGSC0003DMG400012813 ID=PGSC0003DMT400033356.v4.03 annot-version=v4.03
Sequence

MDEEANSWIRRTKFSHTICHRLDAARLSSSPVSFQPRSITGAKTRPGTASLNSRPDPTVK
QIQQNPSTNKQRALSPLPKTKLPDTFKEARSDQRRFSTPHPQRKGHEKGIVGKLFLKDSH
EKKIASSGSAISKSAAKFNDKSKNRNRKDSAWTKYFDHNGRRVTAVETADEYTVDLSKLF
LGLRFAHGAHSQLYHGIYRDEPVAVKMIKLPDDDENGALATRLENQFTREVTLLSQLHHQ
NVVKFVGACRKTPVFCVVTEYLSEGSLRAHLHKLEDKSLTLQKLIALALDIAHGMQYIHS
QGIIHRDLKPENILIDENFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGR
KVDVYSFGLILWEMVAGTVPYEDMTPVQAAFAVVNKNMRPPIPGACPLAMRTLIEQCWSL
QPEKRPEFWQIVKVLEQFESSVAQDGTLNLVQNSMFHHKKGFLHWIQKLGSVHQNASSKS
KAFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400033356
Transcript Infomation

pacid=37463309 locus=PGSC0003DMG400012813 ID=PGSC0003DMT400033356.v4.03 annot-version=v4.03
Sequence

ATGGACGAGGAAGCTAATTCTTGGATTAGGAGAACGAAATTTTCTCATACCATTTGTCAT
AGGTTGGATGCAGCTAGATTGTCCAGTAGCCCTGTCAGTTTTCAGCCTAGAAGTATTACA
GGTGCCAAAACTAGACCTGGAACAGCTTCTCTTAATTCAAGACCTGATCCAACTGTTAAG
CAAATTCAGCAAAACCCGAGTACAAATAAGCAGAGGGCTTTATCCCCTCTTCCGAAAACC
AAACTTCCCGATACCTTTAAGGAAGCTCGATCTGATCAGAGGAGATTTTCGACTCCACAT
CCACAAAGGAAGGGACATGAGAAGGGCATTGTGGGTAAGTTGTTCCTCAAAGATTCTCAT
GAAAAGAAAATAGCTAGTTCCGGTTCTGCTATTTCAAAGTCAGCAGCGAAGTTCAATGAC
AAATCAAAGAACCGGAACCGGAAAGATTCTGCATGGACAAAGTACTTTGATCACAATGGG
CGCAGGGTTACGGCTGTAGAAACAGCTGATGAGTATACTGTTGATCTTTCCAAGCTATTT
CTTGGGCTTAGATTTGCTCATGGTGCGCATAGTCAGCTTTACCATGGAATATACAGGGAT
GAACCTGTTGCTGTGAAAATGATAAAACTACCTGATGATGACGAAAATGGAGCTTTAGCA
ACTCGGTTGGAGAATCAGTTTACCAGAGAAGTTACTCTGTTGTCTCAACTCCACCATCAA
AATGTCGTAAAGTTTGTAGGAGCATGCAGAAAGACACCAGTTTTTTGTGTTGTCACTGAG
TATCTATCTGAGGGTTCTTTGAGAGCACACCTTCACAAGCTTGAGGACAAGTCCCTGACC
TTGCAAAAACTGATTGCACTGGCCTTGGATATTGCTCATGGGATGCAATATATTCACTCA
CAAGGCATTATTCATAGGGATCTCAAACCGGAAAATATACTTATCGATGAGAACTTCCAC
CTTAAAATTGCAGATTTTGGAATTGCTTGTGAGGAAGCATATTGTGATCTTTTGGCTGAT
GATCCAGGTACTTACCGATGGATGGCACCTGAGATGATTAAACGAAAATCATATGGACGG
AAGGTGGATGTGTATAGTTTTGGACTCATTTTATGGGAAATGGTGGCCGGAACCGTTCCT
TATGAAGACATGACACCAGTACAGGCTGCTTTTGCTGTTGTGAACAAGAATATGAGACCA
CCTATTCCTGGGGCCTGCCCTCTTGCCATGAGAACTTTGATCGAACAGTGTTGGTCTTTG
CAACCAGAAAAGAGGCCTGAGTTTTGGCAGATCGTGAAGGTACTGGAGCAGTTTGAATCT
TCAGTTGCGCAAGATGGGACTCTGAATCTAGTACAAAATTCAATGTTTCATCACAAGAAG
GGGTTTCTTCATTGGATCCAAAAACTTGGATCCGTACATCAAAATGCTTCATCAAAGTCT
AAGGCTTTCTCATGA