Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033263
CDS Infomation

pacid=37437213 polypeptide=PGSC0003DMP400022635 locus=PGSC0003DMG400012775 ID=PGSC0003DMT400033263.v4.03 annot-version=v4.03
Sequence

ATGGCATTTTGGGGTATTGAAGTGAAAGCTGGTAAGCCAGTTACTCATTCGTCCAATAAT
GAGAGAGGAAGGCTACGAATTTCTCAGGCAACATTGGGAATTGGCAATGCTGAAACTAAA
AGTTTGGTACAGTGTAATGTGGGGAACAAGAGTCCTGTTTTCCTCTGTGCTTTGTTACCT
AACAAGACAGAGTCATGCCATTTGGATTTAGAGTTTGAGGAGGCAGAAGATGTGGTTTTT
TCTGTTCTCGGTCCTAGAACTGTTTATCTGACTGGTTATTATGTGGGAAATAGTCGGCGA
GCAAATGTAAACAGTGATACAGAGTCATATGGAGAGGATATTGCAGACACAGAAACAGGG
GAATCCTGCCATGACAGTGATGATGACAAGTATGATGATAGCTTTATCAACGATGCTGAA
CCAGAAATATCACCACCTTCACCTGCTTCAAGCAGCGGAGTTCAAGAAGATGATGAGAAT
GTGTCAGACAATAAGCTTAACAACAACAATGGCGGCAATAAAAGGCTTAGGAAGAAGTAC
CAAGTAAGTGAGTCCGAAAATGAGGATATATTGCAGGAAAGCGATGATGAAGATAGTTGT
CTCTTATCTGCTCTTAAGAAGAAAACAGACGTGAAGGCTGTAGCATCAGAAGATAATCAA
AAGATTGACATTCCTTATAGGACAGAAAATGGTGGCACAGTGGAATCTAAAAAAGCCAAA
CATGAAAACAGCATTAACTCAAAGAAGAAGAGGAAACAGCCTGAGGGCAATGGTGGTAAA
CTTCTTGAAGCAAATACCAGCAGTGATAAGAAGGACTACAAAGAGGATAAAACAAAATTG
GTGGATGTCGGGTTGGCAATGACAATTGATATGAAAGATGGCCAATCTGATACTCTGGAG
CCCCTTGCGGAAGAGGATTCTAATCATGTTCCAAAATCAAAGAAAAGAAAGCATTCTGTG
GAAGCCAAATCTGTTGAAAACCATGATACAGACTCTGCTGTCATTCTTAAAGAGGATCAA
CTGAAACAAGATCCTCTAAAAGCTGGTCACCTGGGTGAGGATCCAATTGCAATTGCAATA
GATGAAGAAGATCAAAAACTGACCATCAATAATAGTAGTGTAGATGGAAAATCTGACTCT
GTGGCTGATGGACACCAATCGGATAAGAAACTTAAAAAGAAGAAGAAAAAGAAGACGAAA
ACTCAGGATGACTGTTTGGTAAACAGGGATCTTCCTGTTCTGCAAGAGAATGAAATGAAT
AGACAATCCGTGGATGTTGAGGACAAGAGTCTGAAGGTCAAGTCTACTGTAATAAAGACC
TTGTCTAATGGGTTGACCATTGAAGAGCTCGCTGTGGGTGAACCTGGTGGAAAATTGGCA
GCTCCAGGAAAGAAGATCAAAGTTCACTACACCGGCAAGCTAAAGGAGAATGGGCAGATA
TTTTACACAAATATGGGAAAATCTCCATATAAATTTCGTCTAGGTGATAAAGACGTCATA
GAGGGATGGAACCTTGGTCTTGCTGGCATGCGTGTGGGTGATAAAAGAAGGCTCACAGTC
CCACCATCAATAGGCTACGGGAGTGAGGGAGCTGGGGAGAATATCCCACCAAACTCATGG
TTGGTGTTTGATATTGAATTGATTGGAGTCCGTGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400022635
PEP Infomation

pacid=37437213 transcript=PGSC0003DMT400033263 locus=PGSC0003DMG400012775 ID=PGSC0003DMT400033263.v4.03 annot-version=v4.03
Sequence

MAFWGIEVKAGKPVTHSSNNERGRLRISQATLGIGNAETKSLVQCNVGNKSPVFLCALLP
NKTESCHLDLEFEEAEDVVFSVLGPRTVYLTGYYVGNSRRANVNSDTESYGEDIADTETG
ESCHDSDDDKYDDSFINDAEPEISPPSPASSSGVQEDDENVSDNKLNNNNGGNKRLRKKY
QVSESENEDILQESDDEDSCLLSALKKKTDVKAVASEDNQKIDIPYRTENGGTVESKKAK
HENSINSKKKRKQPEGNGGKLLEANTSSDKKDYKEDKTKLVDVGLAMTIDMKDGQSDTLE
PLAEEDSNHVPKSKKRKHSVEAKSVENHDTDSAVILKEDQLKQDPLKAGHLGEDPIAIAI
DEEDQKLTINNSSVDGKSDSVADGHQSDKKLKKKKKKKTKTQDDCLVNRDLPVLQENEMN
RQSVDVEDKSLKVKSTVIKTLSNGLTIEELAVGEPGGKLAAPGKKIKVHYTGKLKENGQI
FYTNMGKSPYKFRLGDKDVIEGWNLGLAGMRVGDKRRLTVPPSIGYGSEGAGENIPPNSW
LVFDIELIGVRG*

Transcript Sequence

Transcript ID

PGSC0003DMT400033263
Transcript Infomation

pacid=37437213 locus=PGSC0003DMG400012775 ID=PGSC0003DMT400033263.v4.03 annot-version=v4.03
Sequence

ATGGCATTTTGGGGTATTGAAGTGAAAGCTGGTAAGCCAGTTACTCATTCGTCCAATAAT
GAGAGAGGAAGGCTACGAATTTCTCAGGCAACATTGGGAATTGGCAATGCTGAAACTAAA
AGTTTGGTACAGTGTAATGTGGGGAACAAGAGTCCTGTTTTCCTCTGTGCTTTGTTACCT
AACAAGACAGAGTCATGCCATTTGGATTTAGAGTTTGAGGAGGCAGAAGATGTGGTTTTT
TCTGTTCTCGGTCCTAGAACTGTTTATCTGACTGGTTATTATGTGGGAAATAGTCGGCGA
GCAAATGTAAACAGTGATACAGAGTCATATGGAGAGGATATTGCAGACACAGAAACAGGG
GAATCCTGCCATGACAGTGATGATGACAAGTATGATGATAGCTTTATCAACGATGCTGAA
CCAGAAATATCACCACCTTCACCTGCTTCAAGCAGCGGAGTTCAAGAAGATGATGAGAAT
GTGTCAGACAATAAGCTTAACAACAACAATGGCGGCAATAAAAGGCTTAGGAAGAAGTAC
CAAGTAAGTGAGTCCGAAAATGAGGATATATTGCAGGAAAGCGATGATGAAGATAGTTGT
CTCTTATCTGCTCTTAAGAAGAAAACAGACGTGAAGGCTGTAGCATCAGAAGATAATCAA
AAGATTGACATTCCTTATAGGACAGAAAATGGTGGCACAGTGGAATCTAAAAAAGCCAAA
CATGAAAACAGCATTAACTCAAAGAAGAAGAGGAAACAGCCTGAGGGCAATGGTGGTAAA
CTTCTTGAAGCAAATACCAGCAGTGATAAGAAGGACTACAAAGAGGATAAAACAAAATTG
GTGGATGTCGGGTTGGCAATGACAATTGATATGAAAGATGGCCAATCTGATACTCTGGAG
CCCCTTGCGGAAGAGGATTCTAATCATGTTCCAAAATCAAAGAAAAGAAAGCATTCTGTG
GAAGCCAAATCTGTTGAAAACCATGATACAGACTCTGCTGTCATTCTTAAAGAGGATCAA
CTGAAACAAGATCCTCTAAAAGCTGGTCACCTGGGTGAGGATCCAATTGCAATTGCAATA
GATGAAGAAGATCAAAAACTGACCATCAATAATAGTAGTGTAGATGGAAAATCTGACTCT
GTGGCTGATGGACACCAATCGGATAAGAAACTTAAAAAGAAGAAGAAAAAGAAGACGAAA
ACTCAGGATGACTGTTTGGTAAACAGGGATCTTCCTGTTCTGCAAGAGAATGAAATGAAT
AGACAATCCGTGGATGTTGAGGACAAGAGTCTGAAGGTCAAGTCTACTGTAATAAAGACC
TTGTCTAATGGGTTGACCATTGAAGAGCTCGCTGTGGGTGAACCTGGTGGAAAATTGGCA
GCTCCAGGAAAGAAGATCAAAGTTCACTACACCGGCAAGCTAAAGGAGAATGGGCAGATA
TTTTACACAAATATGGGAAAATCTCCATATAAATTTCGTCTAGGTGATAAAGACGTCATA
GAGGGATGGAACCTTGGTCTTGCTGGCATGCGTGTGGGTGATAAAAGAAGGCTCACAGTC
CCACCATCAATAGGCTACGGGAGTGAGGGAGCTGGGGAGAATATCCCACCAAACTCATGG
TTGGTGTTTGATATTGAATTGATTGGAGTCCGTGGATAA