Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033248
CDS Infomation

pacid=37436098 polypeptide=PGSC0003DMP400022621 locus=PGSC0003DMG400012769 ID=PGSC0003DMT400033248.v4.03 annot-version=v4.03
Sequence

ATGGATCAATTAACAGCTCATGGCCGTCCTCTTCCACCTCCTTTTCACACAAGAGATCTT
CAGTTACAGAATAACAATCCTCACCTCCACGGCCAGTTCCATCACATACAGCAACAGCAG
AAAACTGAAGACGAACAACAAAGCGGACACAGAAATCAGAAACGAGATCGCGACGATAAC
TTCAGTTTAAATCCTGATCAATCCGGTTCGATGGATAGCAAAGGAAACACTATAGGAGGA
GGAGGAGATGGCGGTGGAGAAGTCAGTAGAAGACCAAGAGGAAGACCAGCTGGTTCAAAA
AACAAACCAAAACCACCAATCATTATCACTCGTGATAGCGCTAACGCTTTGAGATCTCAT
GTTATGGAAATCGCTAGTGGTTGTGATATACAAGAAAGTATCTCAAACTTCGCCACCAGA
AGACAACGCGGTGTTTGCATATTAAGTGGGAGCGGAACTGTTACAAACGTTACAATTAGA
CAACCCACGTCTCCGGGTGCGGTGGTAACTCTACATGGAAGATTTGAAATCTTATCTCTT
TCCGGTTCATACTTACCACCGCCAGCTCCGCCAGCCGCATCAGGGCTGACGATATACTTG
GCCGGAGGACAAGGCCAAGTAGTTGGCGGTAGCGTTGTCGGGCCGTTGAATGCTTCAGGG
CCGGTGGTGATAATGGCGGCTTCGTTTGGGAATGCAGCATATGAAAGGCTTCCACTTGAG
GACGAAGAATCGCCGGTGGGGCAGCAAGGAAATGGAGGAAATTTACCAACAAGTAGTGGT
ATAGTAAGTACTAATCAAGCACAACAAATTATGGGTACTGATCCAAATGCTAATTTACTA
CAAGGATTGCCTCAAAATCTACTAAATTCATGTCAATTACCACCAGCTGAGGCTTATTGG
GGAGCAGGAGGTCGTCCTCCTTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022621
PEP Infomation

pacid=37436098 transcript=PGSC0003DMT400033248 locus=PGSC0003DMG400012769 ID=PGSC0003DMT400033248.v4.03 annot-version=v4.03
Sequence

MDQLTAHGRPLPPPFHTRDLQLQNNNPHLHGQFHHIQQQQKTEDEQQSGHRNQKRDRDDN
FSLNPDQSGSMDSKGNTIGGGGDGGGEVSRRPRGRPAGSKNKPKPPIIITRDSANALRSH
VMEIASGCDIQESISNFATRRQRGVCILSGSGTVTNVTIRQPTSPGAVVTLHGRFEILSL
SGSYLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLNASGPVVIMAASFGNAAYERLPLE
DEESPVGQQGNGGNLPTSSGIVSTNQAQQIMGTDPNANLLQGLPQNLLNSCQLPPAEAYW
GAGGRPPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400033248
Transcript Infomation

pacid=37436098 locus=PGSC0003DMG400012769 ID=PGSC0003DMT400033248.v4.03 annot-version=v4.03
Sequence

ATGGATCAATTAACAGCTCATGGCCGTCCTCTTCCACCTCCTTTTCACACAAGAGATCTT
CAGTTACAGAATAACAATCCTCACCTCCACGGCCAGTTCCATCACATACAGCAACAGCAG
AAAACTGAAGACGAACAACAAAGCGGACACAGAAATCAGAAACGAGATCGCGACGATAAC
TTCAGTTTAAATCCTGATCAATCCGGTTCGATGGATAGCAAAGGAAACACTATAGGAGGA
GGAGGAGATGGCGGTGGAGAAGTCAGTAGAAGACCAAGAGGAAGACCAGCTGGTTCAAAA
AACAAACCAAAACCACCAATCATTATCACTCGTGATAGCGCTAACGCTTTGAGATCTCAT
GTTATGGAAATCGCTAGTGGTTGTGATATACAAGAAAGTATCTCAAACTTCGCCACCAGA
AGACAACGCGGTGTTTGCATATTAAGTGGGAGCGGAACTGTTACAAACGTTACAATTAGA
CAACCCACGTCTCCGGGTGCGGTGGTAACTCTACATGGAAGATTTGAAATCTTATCTCTT
TCCGGTTCATACTTACCACCGCCAGCTCCGCCAGCCGCATCAGGGCTGACGATATACTTG
GCCGGAGGACAAGGCCAAGTAGTTGGCGGTAGCGTTGTCGGGCCGTTGAATGCTTCAGGG
CCGGTGGTGATAATGGCGGCTTCGTTTGGGAATGCAGCATATGAAAGGCTTCCACTTGAG
GACGAAGAATCGCCGGTGGGGCAGCAAGGAAATGGAGGAAATTTACCAACAAGTAGTGGT
ATAGTAAGTACTAATCAAGCACAACAAATTATGGGTACTGATCCAAATGCTAATTTACTA
CAAGGATTGCCTCAAAATCTACTAAATTCATGTCAATTACCACCAGCTGAGGCTTATTGG
GGAGCAGGAGGTCGTCCTCCTTATTGA