Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033233
CDS Infomation

pacid=37441023 polypeptide=PGSC0003DMP400022609 locus=PGSC0003DMG400012762 ID=PGSC0003DMT400033233.v4.03 annot-version=v4.03
Sequence

ATGAAGATAAATCCACCAATGTTGTTGCAAATAAGCAGATCCTATATTAAACTAGTCAAA
GCTGACAATTTTCAAAGGTGTTTTGGTAGACATTTTTCTAACACTGAAACTCCAACTACC
AACTCCATTGTTGATGCTTCATTAGCTGTTCCCATTTCAGCTTCATCCATGGAATCCGAT
AACTCAAAGAAGGCAACTGATTCAACATGGGTTTCGAAGATTGTATTGTATTCTTTCTGG
CAAAGTTCATGTTCTTGGAGAGTTCGCTTCGCCTTAAATCTCAAAGGTCTTTCTTATGAA
TATAGAGCAGTCAACCTTGGCAAAGGAGAACAGTTCACTTTAGAGTTTGATAAATTAAAT
CCTCTTCATTATGTTCCTGTTTTGGTTGATGGTGATGTGGTAATTTCGGACTCCTATGCA
ATTTTACTGTATTTGGAAGAGAAGTATCATCAGAGGCCCCTGCTGCCAGTTGAACCTCAA
TTAAGAGCTCTCAATCTTCAGGCAGCAAGTATTGTCAGCTCCAATATGCAGCCACTTCAT
ATGTTATCAGTGCTGAGGTACATGGAGGAAAGGGTTGGTCCCGAAGAGAAACAATTATGG
GTAAAATTTCACATACAAAAAGGTTTTGGAGCTCTTGAAAAATTGCTGACGGGTTCTGCT
GGAAAGTATGCTACAGGAGATGAAGTATATATGGCTGACGTGTTTTTGGCACCTCAAATT
GCAGTAGCTACTAAAAGGTTTAACATTGACATGTCTGAATTTCCAACCTTAAGGAAGATA
TATGATTCTTGTGAAGCGTTACCAGAATTCCAAGCTTCTTTGCCAGAACGACAGCCTGAT
GCTCCCCCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022609
PEP Infomation

pacid=37441023 transcript=PGSC0003DMT400033233 locus=PGSC0003DMG400012762 ID=PGSC0003DMT400033233.v4.03 annot-version=v4.03
Sequence

MKINPPMLLQISRSYIKLVKADNFQRCFGRHFSNTETPTTNSIVDASLAVPISASSMESD
NSKKATDSTWVSKIVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGKGEQFTLEFDKLN
PLHYVPVLVDGDVVISDSYAILLYLEEKYHQRPLLPVEPQLRALNLQAASIVSSNMQPLH
MLSVLRYMEERVGPEEKQLWVKFHIQKGFGALEKLLTGSAGKYATGDEVYMADVFLAPQI
AVATKRFNIDMSEFPTLRKIYDSCEALPEFQASLPERQPDAPP*

Transcript Sequence

Transcript ID

PGSC0003DMT400033233
Transcript Infomation

pacid=37441023 locus=PGSC0003DMG400012762 ID=PGSC0003DMT400033233.v4.03 annot-version=v4.03
Sequence

ATGAAGATAAATCCACCAATGTTGTTGCAAATAAGCAGATCCTATATTAAACTAGTCAAA
GCTGACAATTTTCAAAGGTGTTTTGGTAGACATTTTTCTAACACTGAAACTCCAACTACC
AACTCCATTGTTGATGCTTCATTAGCTGTTCCCATTTCAGCTTCATCCATGGAATCCGAT
AACTCAAAGAAGGCAACTGATTCAACATGGGTTTCGAAGATTGTATTGTATTCTTTCTGG
CAAAGTTCATGTTCTTGGAGAGTTCGCTTCGCCTTAAATCTCAAAGGTCTTTCTTATGAA
TATAGAGCAGTCAACCTTGGCAAAGGAGAACAGTTCACTTTAGAGTTTGATAAATTAAAT
CCTCTTCATTATGTTCCTGTTTTGGTTGATGGTGATGTGGTAATTTCGGACTCCTATGCA
ATTTTACTGTATTTGGAAGAGAAGTATCATCAGAGGCCCCTGCTGCCAGTTGAACCTCAA
TTAAGAGCTCTCAATCTTCAGGCAGCAAGTATTGTCAGCTCCAATATGCAGCCACTTCAT
ATGTTATCAGTGCTGAGGTACATGGAGGAAAGGGTTGGTCCCGAAGAGAAACAATTATGG
GTAAAATTTCACATACAAAAAGGTTTTGGAGCTCTTGAAAAATTGCTGACGGGTTCTGCT
GGAAAGTATGCTACAGGAGATGAAGTATATATGGCTGACGTGTTTTTGGCACCTCAAATT
GCAGTAGCTACTAAAAGGTTTAACATTGACATGTCTGAATTTCCAACCTTAAGGAAGATA
TATGATTCTTGTGAAGCGTTACCAGAATTCCAAGCTTCTTTGCCAGAACGACAGCCTGAT
GCTCCCCCCTGA