Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033230
CDS Infomation

pacid=37440278 polypeptide=PGSC0003DMP400022606 locus=PGSC0003DMG400012761 ID=PGSC0003DMT400033230.v4.03 annot-version=v4.03
Sequence

ATGGCCCGTAATAAGGAAGCGGTAGTGTTGGTAATTGATGTGGGTCCTTCCATGCACTCA
GTTTTACCTGAGATTGAAAAAGTTTGCTCATTGTTGATACAGAAGAAGCTGGTTTTCAGC
AGATATGATGAAGTGGGGTTTGTCTTGTTTGGAACTGCAGATACCAAGAATGAATTGAAA
GAGGAAATAGGAGGATATGAACATGTGACAGTTCTGCGAAATATCAAAGTTGTAGATGAA
GATCTTGTTGATGCTCTGGAAAAACTTCCACGAGGAAGTGTTCCTGGAGATTTTCTTGAT
GCGATTGTTGTTGGTATGGACATGCTCATTAAGAAGTTTGGACAAACCAACAAGGCAAAG
AAACGTCTTTGCCTTATTACAAATGCTGTTTCTCTCATCAAAGATCCATTTGAAGGAACA
AAGGAAGATCAAGTAAACACCATTGCTACACAGATGACAGCACAAGGCATGAAGATGGAC
TGTGTAATTGTCAGAATGAAACAAGATTGGGAAACAAGTAGGAGAATTATGGAAGAAAAT
GATTTTCTAATGTCAGTATTCTCGAATAAATCTTCCTCAAAAGTAGTATATGTGGAAAGT
CCAACTTCTTTATTAGGTGCACTTAGAACGCGTAATATATCGCCAGTCACGATATACAGA
GGTGATTTTGAAATTGGTGCCCAATTGAAGATCAAGGTATGGGTTTACAAGAAAACATCT
GAAGAGAAGTTTCCTACCCTGAAAAAGTACTCCGATAAGGCTCCTTCCACTGATAAATTT
GCTACTCATGAAATCAAGGTTGATTACGAATATAAAAGCATAGAAGACCCTAATAAAGTT
GTGCCACCAGAACAGAGGATTAAAGGTTTTCAGTATGGACCTCAAGTAGTTCCTATATCC
TCTGCTGAGTTGGAGGCTGTAAAGTTCAAACCAGAGAAAAGTGTGAAGCTACTAGGATTC
ACAGATGCTTCAAACGTAATGCGGCATTACTACCTGAAAGATGTAAATATCTTCATAGCC
GAACCTGGCAACAAAAAAGCCATCCTTGCACTTTCTGCTTTGGCAAGGGCAATGAAGGAA
ATGAACAAAGTAGCAATTGTCCGATGTGTATGGAGGCAAGGACAGGGTAATGTTGTTGTT
GGGGTCCTTACACCAAATGTCTCTGACAAGGATATTACTCCTGATTCATTTTACTTCAAT
ATTCTTCCCTTTGCTGAGGATGTTCGGGAGTTTCAGTTTCCTTCTTTCAGCAATCTGCCT
TCATCAATGCAGCCAAATGAAAAGCAACAAGACGCAGCAGATAAATTGGTTCAGATGTTG
GATCTTGCACCACCTGGAAAACAGGAAGTGTTACCACCTGACTTTACACCTAATCCTGTT
CTAGAGCGTTACTACCGCTATCTTAACCTGAAGTCAAAGCATCCAGATGCTGCTGTTCCT
CCACTTGATGAAACCCTCAGAAAGATAACAGAACCTGATGTTGAGCTTCTTTCTCGAAAC
AAGTCCATCATAGAGGAACTCCGTAGGTCTTTTGAACTAAAAGATAATCCAAAGCTGAAA
AAATCAGCAAGAAGAATAAAAGAGAGACCTTCAGGATCAGATGAGGAAAGAGGAGAGTTC
GACAAAGATGCTGATGTCAAAGCTATAGACTCAATGGAATACTCAGCCAAAACAGAAGTT
GAGAAAGTTGGAGACGTTAATCCTGTCAAAGACTTTGAGGAGATGATGTCTCGAAGAGAT
AATCCAAAATGGATTAGTAAGGCCATTCAGGGTATGAAAAATAAGATCTTTGATCTTGTG
GAGAATTCTTGTGAAGGAGATACATTTCATAAAGCATTGCAATGTTTAGTGGCTCTACGC
AAAGGTTGTATCCTTGAGCAGGAACCAAAGCAGTTCAATGATTTCCTGTGCCACCTGTCT
AAATTTTGCCAAGAAAAAGACCTGAGAAGTTTCTGTCTATATCTCACATCTCATGAATTC
ACTTTTATAACCAAGGCAGAAGCTCCAGACAGTGAAATTCCAGAACACGAGGCTAGAAGC
TTTATGGTCAAGCCTGAACTTGACTCGCAAAATATGAAATCAGAGGCTAAAGCAGAGGAT
GATATTATGAGTATATACCTGGGTGGGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022606
PEP Infomation

pacid=37440278 transcript=PGSC0003DMT400033230 locus=PGSC0003DMG400012761 ID=PGSC0003DMT400033230.v4.03 annot-version=v4.03
Sequence

MARNKEAVVLVIDVGPSMHSVLPEIEKVCSLLIQKKLVFSRYDEVGFVLFGTADTKNELK
EEIGGYEHVTVLRNIKVVDEDLVDALEKLPRGSVPGDFLDAIVVGMDMLIKKFGQTNKAK
KRLCLITNAVSLIKDPFEGTKEDQVNTIATQMTAQGMKMDCVIVRMKQDWETSRRIMEEN
DFLMSVFSNKSSSKVVYVESPTSLLGALRTRNISPVTIYRGDFEIGAQLKIKVWVYKKTS
EEKFPTLKKYSDKAPSTDKFATHEIKVDYEYKSIEDPNKVVPPEQRIKGFQYGPQVVPIS
SAELEAVKFKPEKSVKLLGFTDASNVMRHYYLKDVNIFIAEPGNKKAILALSALARAMKE
MNKVAIVRCVWRQGQGNVVVGVLTPNVSDKDITPDSFYFNILPFAEDVREFQFPSFSNLP
SSMQPNEKQQDAADKLVQMLDLAPPGKQEVLPPDFTPNPVLERYYRYLNLKSKHPDAAVP
PLDETLRKITEPDVELLSRNKSIIEELRRSFELKDNPKLKKSARRIKERPSGSDEERGEF
DKDADVKAIDSMEYSAKTEVEKVGDVNPVKDFEEMMSRRDNPKWISKAIQGMKNKIFDLV
ENSCEGDTFHKALQCLVALRKGCILEQEPKQFNDFLCHLSKFCQEKDLRSFCLYLTSHEF
TFITKAEAPDSEIPEHEARSFMVKPELDSQNMKSEAKAEDDIMSIYLGGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400033230
Transcript Infomation

pacid=37440278 locus=PGSC0003DMG400012761 ID=PGSC0003DMT400033230.v4.03 annot-version=v4.03
Sequence

ATGGCCCGTAATAAGGAAGCGGTAGTGTTGGTAATTGATGTGGGTCCTTCCATGCACTCA
GTTTTACCTGAGATTGAAAAAGTTTGCTCATTGTTGATACAGAAGAAGCTGGTTTTCAGC
AGATATGATGAAGTGGGGTTTGTCTTGTTTGGAACTGCAGATACCAAGAATGAATTGAAA
GAGGAAATAGGAGGATATGAACATGTGACAGTTCTGCGAAATATCAAAGTTGTAGATGAA
GATCTTGTTGATGCTCTGGAAAAACTTCCACGAGGAAGTGTTCCTGGAGATTTTCTTGAT
GCGATTGTTGTTGGTATGGACATGCTCATTAAGAAGTTTGGACAAACCAACAAGGCAAAG
AAACGTCTTTGCCTTATTACAAATGCTGTTTCTCTCATCAAAGATCCATTTGAAGGAACA
AAGGAAGATCAAGTAAACACCATTGCTACACAGATGACAGCACAAGGCATGAAGATGGAC
TGTGTAATTGTCAGAATGAAACAAGATTGGGAAACAAGTAGGAGAATTATGGAAGAAAAT
GATTTTCTAATGTCAGTATTCTCGAATAAATCTTCCTCAAAAGTAGTATATGTGGAAAGT
CCAACTTCTTTATTAGGTGCACTTAGAACGCGTAATATATCGCCAGTCACGATATACAGA
GGTGATTTTGAAATTGGTGCCCAATTGAAGATCAAGGTATGGGTTTACAAGAAAACATCT
GAAGAGAAGTTTCCTACCCTGAAAAAGTACTCCGATAAGGCTCCTTCCACTGATAAATTT
GCTACTCATGAAATCAAGGTTGATTACGAATATAAAAGCATAGAAGACCCTAATAAAGTT
GTGCCACCAGAACAGAGGATTAAAGGTTTTCAGTATGGACCTCAAGTAGTTCCTATATCC
TCTGCTGAGTTGGAGGCTGTAAAGTTCAAACCAGAGAAAAGTGTGAAGCTACTAGGATTC
ACAGATGCTTCAAACGTAATGCGGCATTACTACCTGAAAGATGTAAATATCTTCATAGCC
GAACCTGGCAACAAAAAAGCCATCCTTGCACTTTCTGCTTTGGCAAGGGCAATGAAGGAA
ATGAACAAAGTAGCAATTGTCCGATGTGTATGGAGGCAAGGACAGGGTAATGTTGTTGTT
GGGGTCCTTACACCAAATGTCTCTGACAAGGATATTACTCCTGATTCATTTTACTTCAAT
ATTCTTCCCTTTGCTGAGGATGTTCGGGAGTTTCAGTTTCCTTCTTTCAGCAATCTGCCT
TCATCAATGCAGCCAAATGAAAAGCAACAAGACGCAGCAGATAAATTGGTTCAGATGTTG
GATCTTGCACCACCTGGAAAACAGGAAGTGTTACCACCTGACTTTACACCTAATCCTGTT
CTAGAGCGTTACTACCGCTATCTTAACCTGAAGTCAAAGCATCCAGATGCTGCTGTTCCT
CCACTTGATGAAACCCTCAGAAAGATAACAGAACCTGATGTTGAGCTTCTTTCTCGAAAC
AAGTCCATCATAGAGGAACTCCGTAGGTCTTTTGAACTAAAAGATAATCCAAAGCTGAAA
AAATCAGCAAGAAGAATAAAAGAGAGACCTTCAGGATCAGATGAGGAAAGAGGAGAGTTC
GACAAAGATGCTGATGTCAAAGCTATAGACTCAATGGAATACTCAGCCAAAACAGAAGTT
GAGAAAGTTGGAGACGTTAATCCTGTCAAAGACTTTGAGGAGATGATGTCTCGAAGAGAT
AATCCAAAATGGATTAGTAAGGCCATTCAGGGTATGAAAAATAAGATCTTTGATCTTGTG
GAGAATTCTTGTGAAGGAGATACATTTCATAAAGCATTGCAATGTTTAGTGGCTCTACGC
AAAGGTTGTATCCTTGAGCAGGAACCAAAGCAGTTCAATGATTTCCTGTGCCACCTGTCT
AAATTTTGCCAAGAAAAAGACCTGAGAAGTTTCTGTCTATATCTCACATCTCATGAATTC
ACTTTTATAACCAAGGCAGAAGCTCCAGACAGTGAAATTCCAGAACACGAGGCTAGAAGC
TTTATGGTCAAGCCTGAACTTGACTCGCAAAATATGAAATCAGAGGCTAAAGCAGAGGAT
GATATTATGAGTATATACCTGGGTGGGAAGTAG